Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 2.1e-54 215.3 100 100.0
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.3e-47 191.4 94 91.5
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.8e-46 188.3 94 89.4
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 4.7e-46 187.6 94 89.4
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 1.1e-45 186.4 94 89.4
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 1.8e-45 185.7 94 87.2
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 3.1e-45 184.9 94 89.4
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 4.0e-45 184.5 94 87.2
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 5.2e-45 184.1 94 86.2
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 6.8e-45 183.7 94 88.3
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 6.8e-45 183.7 94 85.1
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 8.9e-45 183.3 94 87.2
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 8.9e-45 183.3 94 86.2
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 1.2e-44 183.0 94 85.1
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 1.2e-44 183.0 94 84.0
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.2e-44 183.0 100 85.0
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 1.5e-44 182.6 94 86.2
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 2.0e-44 182.2 94 83.0
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 2.0e-44 182.2 94 84.0
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 2.0e-44 182.2 94 87.2
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 2.6e-44 181.8 94 84.0
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 3.4e-44 181.4 94 86.2
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 4.4e-44 181.0 94 86.2
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 4.4e-44 181.0 94 86.2
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 4.4e-44 181.0 94 85.1
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 5.8e-44 180.6 94 87.2
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 5.8e-44 180.6 94 87.2
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 5.8e-44 180.6 94 85.1
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 7.5e-44 180.3 94 84.0
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 7.5e-44 180.3 94 85.1
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 7.5e-44 180.3 94 83.0
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 7.5e-44 180.3 94 83.0
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 7.5e-44 180.3 94 84.0
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 7.5e-44 180.3 94 81.9
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 7.5e-44 180.3 94 86.2
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.3e-43 179.5 94 84.0
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 1.3e-43 179.5 94 81.9
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.7e-43 179.1 94 84.0
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.7e-43 179.1 94 81.9
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 1.7e-43 179.1 94 81.9
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.7e-43 179.1 94 83.0
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 1.7e-43 179.1 94 84.0
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 2.2e-43 178.7 94 84.0
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 2.9e-43 178.3 94 84.0
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.9e-43 178.3 94 80.9
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 3.7e-43 177.9 94 84.0
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 3.7e-43 177.9 94 84.0
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 4.9e-43 177.6 94 81.9
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 6.4e-43 177.2 94 81.9
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 6.4e-43 177.2 94 83.0
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 6.4e-43 177.2 94 81.9
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 6.4e-43 177.2 94 80.9
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 6.4e-43 177.2 94 80.9
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 8.3e-43 176.8 94 81.9
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 8.3e-43 176.8 94 81.9
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.4e-42 176.0 94 83.0
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 1.4e-42 176.0 94 81.9
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 1.4e-42 176.0 94 81.9
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 1.9e-42 175.6 94 81.9
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 4.1e-42 174.5 94 80.9
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 4.1e-42 174.5 94 80.9
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 5.4e-42 174.1 94 81.9
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 7.1e-42 173.7 94 80.9
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 7.1e-42 173.7 94 79.8
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 7.1e-42 173.7 94 83.0
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 7.1e-42 173.7 95 80.0
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 9.2e-42 173.3 94 80.9
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.2e-41 172.9 94 80.9
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 2.1e-41 172.2 94 81.9
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 2.7e-41 171.8 94 80.9
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 2.7e-41 171.8 94 79.8
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 2.7e-41 171.8 94 78.7
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 7.8e-41 170.2 94 77.7
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.0e-40 169.9 94 79.8
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.3e-40 169.5 94 81.9
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.3e-40 169.5 95 81.1
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 1.7e-40 169.1 94 76.6
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.7e-40 169.1 94 76.6
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 1.7e-40 169.1 94 77.7
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 3.9e-40 167.9 94 79.8
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.5e-39 165.2 95 76.8
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 9.5e-39 163.3 90 82.2
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 9.5e-39 163.3 94 73.4
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.2e-38 162.9 95 73.7
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.6e-38 162.5 96 74.0
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 1.6e-38 162.5 96 75.0
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 4.7e-38 161.0 94 70.2
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.4e-37 159.5 96 74.0
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 2.4e-37 158.7 97 72.2
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 3.1e-37 158.3 99 71.7
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 6.8e-37 157.1 96 69.8
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 6.8e-37 157.1 96 69.8
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 6.8e-37 157.1 96 69.8
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 6.8e-37 157.1 96 69.8
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 6.8e-37 157.1 96 69.8
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 8.9e-37 156.8 96 70.8
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 1.2e-36 156.4 102 68.6
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 1.5e-36 156.0 94 72.3
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 2.0e-36 155.6 96 70.8
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 2.0e-36 155.6 96 68.8
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 2.0e-36 155.6 94 73.4
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.7e-35 152.5 94 69.1
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 2.9e-35 151.8 96 70.8
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 2.9e-35 151.8 94 70.2
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.8e-35 151.4 94 69.1
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 4.9e-35 151.0 94 70.2
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.9e-35 151.0 94 70.2
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 1.9e-34 149.1 101 65.3
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.9e-34 149.1 94 68.1
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.9e-34 149.1 94 67.0
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 3.2e-34 148.3 94 67.0
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.0e-32 143.3 95 65.3
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 5.1e-24 114.4 84 58.3
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 5.6e-23 110.9 79 58.2
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.5e-20 102.8 107 41.1
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 3.5e-17 91.7 86 59.3
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.1e-13 80.1 45 75.6


User provided reference genes

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