Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia07788 Actinidia chinensis HOM05D000290 ORTHO05D007356 3.5e-68 261.5 137 100.0
Dinv34498 Davidia involucrata HOM05D000290 ORTHO05D007356 1.4e-48 196.4 151 73.5
GSVIVG01032656001 Vitis vinifera HOM05D000290 ORTHO05D007356 2.4e-48 195.7 151 70.2
CSS0037983 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007356 1.2e-47 193.4 151 71.5
TAR623G1031 Trochodendron aralioides HOM05D000290 ORTHO05D007356 1.2e-47 193.4 151 72.8
Rhsim03G0153700 Rhododendron simsii HOM05D000290 ORTHO05D007356 2.6e-47 192.2 151 72.2
CSS0016279 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007356 3.4e-47 191.8 151 70.9
Thecc.10G185100 Theobroma cacao HOM05D000290 ORTHO05D007356 1.3e-46 189.9 151 70.2
Ciclev10031187m.g Citrus clementina HOM05D000290 ORTHO05D007356 1.7e-46 189.5 148 70.3
Cfa001193 Carpinus fangiana HOM05D000290 ORTHO05D007356 2.2e-46 189.1 151 70.2
PGR142G4431 Punica granatum HOM05D000290 ORTHO05D007356 2.2e-46 189.1 151 70.2
Gohir.A05G404300 Gossypium hirsutum HOM05D000290 ORTHO05D007356 2.9e-46 188.7 151 68.9
Gohir.D04G011400 Gossypium hirsutum HOM05D000290 ORTHO05D007356 5.0e-46 188.0 151 68.2
Gorai.012G013600 Gossypium raimondii HOM05D000290 ORTHO05D007356 5.0e-46 188.0 151 68.2
AUR62030591 Chenopodium quinoa HOM05D000290 ORTHO05D007356 6.5e-46 187.6 151 68.9
Duzib114G0405 Durio zibethinus HOM05D000290 ORTHO05D007356 8.5e-46 187.2 151 67.5
AUR62024948 Chenopodium quinoa HOM05D000290 ORTHO05D007356 1.9e-45 186.0 151 68.2
THA.LOC104823168 Tarenaya hassleriana HOM05D000290 ORTHO05D007356 1.9e-45 186.0 151 67.5
Eucgr.G03148 Eucalyptus grandis HOM05D000290 ORTHO05D007356 2.5e-45 185.7 151 69.5
BcaB01g05943 Brassica carinata HOM05D000290 ORTHO05D007356 3.2e-45 185.3 151 67.5
Potri.019G061300 Populus trichocarpa HOM05D000290 ORTHO05D007356 5.5e-45 184.5 151 67.5
Cpa.g.sc19.40 Carica papaya HOM05D000290 ORTHO05D007356 7.2e-45 184.1 151 66.9
COL.COLO4_19476 Corchorus olitorius HOM05D000290 ORTHO05D007356 7.2e-45 184.1 151 68.2
EL10Ac2g02669 Beta vulgaris HOM05D000290 ORTHO05D007356 1.2e-44 183.3 151 66.9
Manes.07G142100 Manihot esculenta HOM05D000290 ORTHO05D007356 1.2e-44 183.3 151 68.2
Sp6g37630 Schrenkiella parvula HOM05D000290 ORTHO05D007356 1.2e-44 183.3 151 66.9
AT5G05200 Arabidopsis thaliana HOM05D000290 ORTHO05D007356 1.6e-44 183.0 151 66.9
CiPaw.01G307500 Carya illinoinensis HOM05D000290 ORTHO05D007356 2.1e-44 182.6 151 68.2
AL6G15040 Arabidopsis lyrata HOM05D000290 ORTHO05D007356 2.7e-44 182.2 151 66.2
CANSAT56G2455 Cannabis sativa HOM05D000290 ORTHO05D007356 2.7e-44 182.2 151 66.9
CARHR208040 Cardamine hirsuta HOM05D000290 ORTHO05D007356 2.7e-44 182.2 151 67.5
Oeu039386.1 Olea europaea HOM05D000290 ORTHO05D007356 2.7e-44 182.2 151 66.9
BcaB01g05718 Brassica carinata HOM05D000290 ORTHO05D007356 4.6e-44 181.4 151 66.2
Thhalv10013198m.g Eutrema salsugineum HOM05D000290 ORTHO05D007356 4.6e-44 181.4 151 66.2
Hund13437 Selenicereus undatus HOM05D000290 ORTHO05D007356 4.6e-44 181.4 151 66.2
Cc02_g05200 Coffea canephora HOM05D000290 ORTHO05D007356 6.1e-44 181.0 151 66.2
Carub.0006s0413 Capsella rubella HOM05D000290 ORTHO05D007356 7.9e-44 180.6 151 65.6
MD07G1235400 Malus domestica HOM05D000290 ORTHO05D007356 7.9e-44 180.6 151 66.2
Duzib128G1704 Durio zibethinus HOM05D000290 ORTHO05D007356 1.0e-43 180.3 151 66.2
QL08p065093 Quercus lobata HOM05D000290 ORTHO05D007356 1.0e-43 180.3 154 66.9
HanXRQChr14g0460511 Helianthus annuus HOM05D000290 ORTHO05D007356 1.4e-43 179.9 151 66.2
Ah.12g064460 Amaranthus hybridus HOM05D000290 ORTHO05D007356 1.8e-43 179.5 151 65.6
Migut.F01231 Erythranthe guttata HOM05D000290 ORTHO05D007356 1.8e-43 179.5 151 66.2
RcHm_v2.0_Chr1g0372581 Rosa chinensis HOM05D000290 ORTHO05D007356 2.3e-43 179.1 151 66.2
vmacro06903 Vaccinium macrocarpon HOM05D000290 ORTHO05D007356 3.0e-43 178.7 172 62.8
FvH4_7g26150 Fragaria vesca HOM05D000290 ORTHO05D007356 5.1e-43 177.9 151 65.6
Prupe.2G265700 Prunus persica HOM05D000290 ORTHO05D007356 5.1e-43 177.9 151 64.2
Solyc03g095620.4 Solanum lycopersicum HOM05D000290 ORTHO05D007356 5.1e-43 177.9 151 66.2
Atru.chr12.193 Acer truncatum HOM05D000290 ORTHO05D007356 6.7e-43 177.6 151 64.2
Glyma.14G186700 Glycine max HOM05D000290 ORTHO05D007356 1.5e-42 176.4 151 64.2
PGSC0003DMG400022947 Solanum tuberosum HOM05D000290 ORTHO05D007356 1.5e-42 176.4 151 66.2
ATR1127G020 Amborella trichopoda HOM05D000290 ORTHO05D007356 2.0e-42 176.0 151 64.2
Nitab4.5_0000171g0290 Nicotiana tabacum HOM05D000290 ORTHO05D007356 2.0e-42 176.0 151 65.6
Nitab4.5_0005979g0040 Nicotiana tabacum HOM05D000290 ORTHO05D007356 2.0e-42 176.0 151 65.6
PSO017G3158 Papaver somniferum HOM05D000290 ORTHO05D007356 2.0e-42 176.0 151 64.9
PSO170G6016 Papaver somniferum HOM05D000290 ORTHO05D007356 2.0e-42 176.0 151 64.9
ECA238G2935 Erigeron canadensis HOM05D000290 ORTHO05D007356 2.5e-42 175.6 151 66.2
TWI09G1541 Tripterygium wilfordii HOM05D000290 ORTHO05D007356 5.7e-42 174.5 151 64.2
A03p02240 Brassica napus HOM05D000290 ORTHO05D007356 7.4e-42 174.1 167 60.5
C03p02580 Brassica napus HOM05D000290 ORTHO05D007356 7.4e-42 174.1 169 60.4
Sopen03g025570 Solanum pennellii HOM05D000290 ORTHO05D007356 7.4e-42 174.1 151 64.2
Lj8A52T21 Lonicera japonica HOM05D000290 ORTHO05D007356 9.7e-42 173.7 176 60.2
Peaxi162Scf00073g02224 Petunia axillaris HOM05D000290 ORTHO05D007356 9.7e-42 173.7 151 64.2
CAN.G1229.6 Capsicum annuum HOM05D000290 ORTHO05D007356 1.3e-41 173.3 151 63.6
BraA03t09588Z Brassica rapa HOM05D000290 ORTHO05D007356 1.7e-41 172.9 167 59.9
Ca_23242_v3 Cicer arietinum L. HOM05D000290 ORTHO05D007356 2.8e-41 172.2 151 62.9
Phvul.008G186400 Phaseolus vulgaris HOM05D000290 ORTHO05D007356 4.8e-41 171.4 151 62.3
Medtr5g068050 Medicago truncatula HOM05D000290 ORTHO05D007356 1.1e-40 170.2 151 62.3
arahy.Tifrunner.gnm1.ann1.S15XUX Arachis hypogaea HOM05D000290 ORTHO05D007356 1.4e-40 169.9 151 63.6
SalBow2G1855 Salvia bowleyana HOM05D000290 ORTHO05D007356 1.4e-40 169.9 160 61.9
Aqoxy4G03280 Aquilegia oxysepala HOM05D000290 ORTHO05D007356 1.8e-40 169.5 151 62.3
arahy.Tifrunner.gnm1.ann1.FMIL5U Arachis hypogaea HOM05D000290 ORTHO05D007356 1.8e-40 169.5 151 63.6
FAN01G0461 Fragaria x ananassa HOM05D000290 ORTHO05D007356 1.8e-40 169.5 162 61.1
FAN06G0462 Fragaria x ananassa HOM05D000290 ORTHO05D007356 1.8e-40 169.5 162 61.1
FAN10G3915 Fragaria x ananassa HOM05D000290 ORTHO05D007356 1.8e-40 169.5 162 61.1
Sed0001960 Sechium edule HOM05D000290 ORTHO05D007356 1.8e-40 169.5 151 62.9
SGA_v2.0_scaffold160G37737 Striga asiatica HOM05D000290 ORTHO05D007356 2.4e-40 169.1 159 60.4
ClCG07G005270 Citrullus lanatus HOM05D000290 ORTHO05D007356 3.1e-40 168.7 151 62.3
SEGI_22277 Sequoiadendron giganteum HOM05D000290 ORTHO05D007356 3.1e-40 168.7 151 60.9
MELO3C020171.2 Cucumis melo HOM05D000290 ORTHO05D007356 5.3e-40 167.9 151 61.6
CsaV3_5G011120 Cucumis sativus L. HOM05D000290 ORTHO05D007356 5.3e-40 167.9 151 61.6
LjContig00408g0018075 Lotus japonicus HOM05D000290 ORTHO05D007356 9.1e-40 167.2 151 62.3
Haze_17371 Corylus avellana HOM05D000290 ORTHO05D007356 3.4e-39 165.2 195 53.8
Lalb_Chr10g0102831 Lupinus albus HOM05D000290 ORTHO05D007356 7.7e-39 164.1 151 60.3
Psat2g061840 Pisum sativum HOM05D000290 ORTHO05D007356 7.7e-39 164.1 151 58.9
HPP92_017912 Vanilla planifolia HOM05D000290 ORTHO05D007356 7.7e-39 164.1 152 61.2
TPR.G33928 Trifolium pratense HOM05D000290 ORTHO05D007356 1.3e-38 163.3 151 59.6
BcaC06g32229 Brassica carinata HOM05D000290 ORTHO05D007356 1.7e-38 162.9 151 62.3
unitig_90.g27551 Utricularia gibba HOM05D000290 ORTHO05D007356 1.1e-37 160.2 149 58.4
Os07g0227800 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D007356 3.2e-37 158.7 151 57.6
A10p30990 Brassica napus HOM05D000290 ORTHO05D007356 2.7e-36 155.6 152 61.8
C09p71500 Brassica napus HOM05D000290 ORTHO05D007356 2.7e-36 155.6 152 61.8
BolC9t59913H Brassica oleracea HOM05D000290 ORTHO05D007356 2.7e-36 155.6 152 61.8
BraA10t45144Z Brassica rapa HOM05D000290 ORTHO05D007356 2.7e-36 155.6 152 61.8
Sabra19G0075100 Salix brachista HOM05D000290 ORTHO05D007356 2.3e-35 152.5 151 60.3
CDE04G2561 Ceratophyllum demersum HOM05D000290 ORTHO05D007356 3.0e-35 152.1 149 57.0
Lsat_1_v5_gn_2_126721 Lactuca sativa HOM05D000290 ORTHO05D007356 3.0e-35 152.1 135 65.9
Aa31LG11G6040 Aethionema arabicum HOM05D000290 ORTHO05D007356 1.4e-32 143.3 151 57.0
Pp3c1_33470 Physcomitrium patens HOM05D000290 ORTHO05D007356 6.5e-30 134.4 151 48.3
SMO361G0050 Selaginella moellendorffii HOM05D000290 ORTHO05D007356 1.1e-29 133.7 150 50.7
Sc10g0003060 Simmondsia chinensis HOM05D000290 ORTHO05D007356 7.2e-29 131.0 114 62.3
AagrBONN_evm.TU.Sc2ySwM_344.3768 Anthoceros agrestis HOM05D000290 ORTHO05D007356 9.4e-29 130.6 151 47.0
Mapoly0021s0153 Marchantia polymorpha HOM05D000290 ORTHO05D007356 1.0e-27 127.1 151 45.7
MD01G1169600 Malus domestica HOM05D000290 ORTHO05D007356 9.1e-24 114.0 106 60.4
Cre09.g407801 Chlamydomonas reinhardtii HOM05D000290 ORTHO05D007356 1.4e-19 100.1 156 37.8
Hma1.2p1_1805F.1_g303120 Hydrangea macrophylla HOM05D000290 ORTHO05D007356 4.4e-18 95.1 98 62.2
MCO04G093 Micromonas commoda HOM05D000290 ORTHO05D007356 1.1e-16 90.5 134 39.6
PRCOL_00000290 Prasinoderma coloniale HOM05D000290 ORTHO05D007356 1.1e-16 90.5 154 35.1
Hma1.2p1_1805F.1_g303140 Hydrangea macrophylla HOM05D000290 ORTHO05D007356 7.0e-16 87.8 51 82.4
Glyma.02G219333 Glycine max HOM05D000290 ORTHO05D007356 2.2e-14 82.8 51 76.5
CBR_g39924 Chara braunii HOM05D000290 ORTHO05D007356 1.5e-13 80.1 52 65.4
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 3.6e-12 75.5 60 66.7
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 1.4e-11 73.6 90 52.2
Nn2g10265 Nelumbo nucifera HOM05D000290 ORTHO05D007356 1.7e-09 66.6 44 79.5


User provided reference genes

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