Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia06874 Actinidia chinensis HOM05D000090 ORTHO05D010509 3.7e-58 228.0 116 100.0
Actinidia06875 Actinidia chinensis HOM05D000090 ORTHO05D001584 8.5e-31 137.1 75 92.0
Actinidia06878 Actinidia chinensis HOM05D000090 ORTHO05D001584 1.0e-20 103.6 75 70.7
Actinidia06877 Actinidia chinensis HOM05D000090 ORTHO05D001584 1.8e-20 102.8 75 70.7
Actinidia06879 Actinidia chinensis HOM05D000090 ORTHO05D001584 1.8e-20 102.8 75 72.0
Actinidia04254 Actinidia chinensis HOM05D000090 ORTHO05D001584 3.0e-20 102.1 75 70.7
Actinidia16299 Actinidia chinensis HOM05D000090 ORTHO05D001584 8.8e-20 100.5 76 68.4
CSS0030384 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D001584 1.7e-18 96.3 75 61.3
CSS0016511 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D001584 2.2e-18 95.9 75 60.0
CSS0017823 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D001584 4.8e-18 94.7 75 60.0
CSS0037423 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D001584 1.8e-17 92.8 75 58.7
CSS0043264 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D001584 1.8e-17 92.8 75 58.7
CSS0017981 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D001584 4.5e-16 88.2 75 57.3
QL01p006056 Quercus lobata HOM05D000090 ORTHO05D001584 5.5e-14 81.3 75 57.3
CSS0002206 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D001584 7.2e-14 80.9 75 54.7
Hma1.2p1_0728F.1_g209400 Hydrangea macrophylla HOM05D000090 ORTHO05D010509 9.4e-14 80.5 99 45.5
Nitab4.5_0000175g0120 Nicotiana tabacum HOM05D000090 ORTHO05D001584 4.7e-13 78.2 81 50.6
Rhsim13G0225100 Rhododendron simsii HOM05D000090 ORTHO05D001584 4.7e-13 78.2 86 46.5
Atru.chr3.2528 Acer truncatum HOM05D000090 ORTHO05D001584 6.1e-13 77.8 99 45.5
CSS0001456 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D001584 1.8e-12 76.3 76 50.0
Ciclev10015029m.g Citrus clementina HOM05D000090 ORTHO05D001584 1.8e-12 76.3 81 51.9
Lj2P651T15 Lonicera japonica HOM05D000090 ORTHO05D001584 1.8e-12 76.3 81 53.1
Lj2P651T29 Lonicera japonica HOM05D000090 ORTHO05D001584 1.8e-12 76.3 81 53.1
Nitab4.5_0004196g0020 Nicotiana tabacum HOM05D000090 ORTHO05D001584 1.8e-12 76.3 81 48.1
Peaxi162Scf00559g00032 Petunia axillaris HOM05D000090 ORTHO05D001584 1.8e-12 76.3 81 49.4
PGSC0003DMG400013603 Solanum tuberosum HOM05D000090 ORTHO05D001584 2.3e-12 75.9 77 49.4
Peaxi162Scf00029g00318 Petunia axillaris HOM05D000090 ORTHO05D001584 3.0e-12 75.5 77 48.1
arahy.Tifrunner.gnm1.ann1.WRGL83 Arachis hypogaea HOM05D000090 ORTHO05D001584 4.0e-12 75.1 75 53.3
Nitab4.5_0000492g0020 Nicotiana tabacum HOM05D000090 ORTHO05D001584 4.0e-12 75.1 71 47.9
PGSC0003DMG400013604 Solanum tuberosum HOM05D000090 ORTHO05D001584 4.0e-12 75.1 77 48.1
PGSC0003DMG400013605 Solanum tuberosum HOM05D000090 ORTHO05D001584 4.0e-12 75.1 76 50.0
Lj2C651T2 Lonicera japonica HOM05D000090 ORTHO05D001584 5.2e-12 74.7 81 53.1
QL01p006080 Quercus lobata HOM05D000090 ORTHO05D001584 5.2e-12 74.7 76 47.4
TAR636G1051 Trochodendron aralioides HOM05D000090 ORTHO05D001584 5.2e-12 74.7 76 50.0
Hma1.2p1_0728F.1_g209390 Hydrangea macrophylla HOM05D000090 ORTHO05D001584 6.8e-12 74.3 99 39.4
HanXRQChr07g0196951 Helianthus annuus HOM05D000090 ORTHO05D001584 8.8e-12 73.9 76 51.3
Phvul.L011543 Phaseolus vulgaris HOM05D000090 ORTHO05D001584 8.8e-12 73.9 75 52.0
Gohir.D08G087300 Gossypium hirsutum HOM05D000090 ORTHO05D001584 1.2e-11 73.6 90 44.4
Medtr2g098430 Medicago truncatula HOM05D000090 ORTHO05D001584 1.2e-11 73.6 91 49.5
Nitab4.5_0003275g0050 Nicotiana tabacum HOM05D000090 ORTHO05D001584 1.5e-11 73.2 76 46.1
PGSC0003DMG400013606 Solanum tuberosum HOM05D000090 ORTHO05D001584 1.5e-11 73.2 77 48.1
GSVIVG01025320001 Vitis vinifera HOM05D000090 ORTHO05D001584 1.5e-11 73.2 88 45.5
Lsat_1_v5_gn_2_101060 Lactuca sativa HOM05D000090 ORTHO05D001584 2.6e-11 72.4 81 48.1
QL01p006068 Quercus lobata HOM05D000090 ORTHO05D001584 2.6e-11 72.4 76 46.1
Sopen11g023940 Solanum pennellii HOM05D000090 ORTHO05D001584 2.6e-11 72.4 77 46.8
Gohir.A08G077500 Gossypium hirsutum HOM05D000090 ORTHO05D001584 3.4e-11 72.0 90 43.3
Nn2g15530 Nelumbo nucifera HOM05D000090 ORTHO05D001584 3.4e-11 72.0 77 45.5
Aqoxy1G00210 Aquilegia oxysepala HOM05D000090 ORTHO05D001584 5.7e-11 71.2 98 36.7
Gorai.004G091900 Gossypium raimondii HOM05D000090 ORTHO05D001584 5.7e-11 71.2 90 43.3
Nitab4.5_0016257g0010 Nicotiana tabacum HOM05D000090 ORTHO05D001584 5.7e-11 71.2 83 43.4
TPR.G6904 Trifolium pratense HOM05D000090 ORTHO05D001584 5.7e-11 71.2 90 48.9
vmacro04170 Vaccinium macrocarpon HOM05D000090 ORTHO05D001584 5.7e-11 71.2 86 43.0
ECA238G1246 Erigeron canadensis HOM05D000090 ORTHO05D001584 7.5e-11 70.9 75 49.3
Glyma.15G032000 Glycine max HOM05D000090 ORTHO05D001584 7.5e-11 70.9 75 52.0
Prupe.6G015900 Prunus persica HOM05D000090 ORTHO05D001584 7.5e-11 70.9 81 45.7
Psat5g288720 Pisum sativum HOM05D000090 ORTHO05D001584 9.8e-11 70.5 104 43.3
Sopen01g002660 Solanum pennellii HOM05D000090 ORTHO05D001584 9.8e-11 70.5 82 46.3
vmacro04173 Vaccinium macrocarpon HOM05D000090 ORTHO05D001584 9.8e-11 70.5 81 48.1
Aqoxy1G00209 Aquilegia oxysepala HOM05D000090 ORTHO05D001584 1.3e-10 70.1 76 44.7
Lj2P650T6 Lonicera japonica HOM05D000090 ORTHO05D001584 1.3e-10 70.1 81 48.1
Haze_23053 Corylus avellana HOM05D000090 ORTHO05D001584 1.7e-10 69.7 115 38.3
PGR119G1260 Punica granatum HOM05D000090 ORTHO05D001584 1.7e-10 69.7 73 46.6
Ca_01275_v3 Cicer arietinum L. HOM05D000090 ORTHO05D001584 2.8e-10 68.9 82 53.7
Lalb_Chr14g0372261 Lupinus albus HOM05D000090 ORTHO05D001584 2.8e-10 68.9 75 49.3
Manes.06G168501 Manihot esculenta HOM05D000090 ORTHO05D001584 3.7e-10 68.6 81 45.7
TAR633G1426 Trochodendron aralioides HOM05D000090 ORTHO05D001584 3.7e-10 68.6 76 44.7
TAR636G2228 Trochodendron aralioides HOM05D000090 ORTHO05D001584 3.7e-10 68.6 76 44.7
Solyc01g006670.2 Solanum lycopersicum HOM05D000090 ORTHO05D001584 4.8e-10 68.2 82 45.1
Atru.chr3.2522 Acer truncatum HOM05D000090 ORTHO05D001584 6.3e-10 67.8 99 41.4
Manes.06G168401 Manihot esculenta HOM05D000090 ORTHO05D001584 6.3e-10 67.8 76 47.4
Oeu035706.1 Olea europaea HOM05D000090 ORTHO05D001584 6.3e-10 67.8 76 44.7
VMungo1080G1540 Vigna mungo HOM05D000090 ORTHO05D001584 6.3e-10 67.8 75 50.7
Dinv42662 Davidia involucrata HOM05D000157 ORTHO05D000691 8.3e-10 67.4 74 45.9
Oeu043755.1 Olea europaea HOM05D000090 ORTHO05D001584 8.3e-10 67.4 72 50.0
Nitab4.5_0004806g0020 Nicotiana tabacum HOM05D000090 ORTHO05D001584 1.1e-09 67.0 77 41.6
TAR625G0634 Trochodendron aralioides HOM05D000090 ORTHO05D001584 1.1e-09 67.0 76 44.7
Sc16g0011680 Simmondsia chinensis HOM05D000090 ORTHO05D001584 1.8e-09 66.2 75 44.0
PGSC0003DMG400021347 Solanum tuberosum HOM05D000090 ORTHO05D001584 1.8e-09 66.2 82 45.1
TWI60G0827 Tripterygium wilfordii HOM05D000090 ORTHO05D001584 1.8e-09 66.2 76 44.7
Duzib150G1528 Durio zibethinus HOM05D000090 ORTHO05D001584 2.4e-09 65.9 76 44.7
Lju1319C2G6 Lonicera japonica HOM05D000090 ORTHO05D001584 2.4e-09 65.9 68 48.5
MD11G1022200 Malus domestica HOM05D000090 ORTHO05D001584 2.4e-09 65.9 76 44.7
TAR633G1145 Trochodendron aralioides HOM05D000090 ORTHO05D001584 2.4e-09 65.9 76 44.7
TAR633G0854 Trochodendron aralioides HOM05D000090 ORTHO05D001584 3.1e-09 65.5 99 39.4
TAR636G1113 Trochodendron aralioides HOM05D000090 ORTHO05D001584 3.1e-09 65.5 99 39.4
Ciclev10015056m.g Citrus clementina HOM05D000090 ORTHO05D001584 4.1e-09 65.1 77 44.2
Potri.001G016500 Populus trichocarpa HOM05D000090 ORTHO05D001584 4.1e-09 65.1 76 47.4
Rhsim13G0225000 Rhododendron simsii HOM05D000090 ORTHO05D001584 4.1e-09 65.1 82 46.3
Thecc.09G225100 Theobroma cacao HOM05D000090 ORTHO05D001584 4.1e-09 65.1 101 40.6
CANSAT54G2904 Cannabis sativa HOM05D000090 ORTHO05D001584 5.4e-09 64.7 87 44.8
CiPaw.14G123500 Carya illinoinensis HOM05D000090 ORTHO05D001584 5.4e-09 64.7 81 42.0
Lju1319C2T1 Lonicera japonica HOM05D000090 ORTHO05D001584 5.4e-09 64.7 79 43.0
Nn5g26875 Nelumbo nucifera HOM05D000090 ORTHO05D001584 5.4e-09 64.7 88 42.0
Potri.003G210400 Populus trichocarpa HOM05D000090 ORTHO05D001584 5.4e-09 64.7 81 45.7
Eucgr.J00809 Eucalyptus grandis HOM05D000090 ORTHO05D001584 7.0e-09 64.3 116 35.3
MBI07_g21071_MAGBIO Magnolia biondii HOM05D000090 ORTHO05D001584 7.0e-09 64.3 76 36.8
Lj3g0008243 Lotus japonicus HOM05D000090 ORTHO05D001584 9.1e-09 63.9 75 45.3
MD11G1021900 Malus domestica HOM05D000090 ORTHO05D001584 1.2e-08 63.5 76 43.4
QL01p006118 Quercus lobata HOM05D000090 ORTHO05D001584 1.6e-08 63.2 77 48.1
Ciclev10015021m.g Citrus clementina HOM05D000090 ORTHO05D001584 2.0e-08 62.8 77 41.6
Ciclev10017937m.g Citrus clementina HOM05D000090 ORTHO05D001584 2.7e-08 62.4 77 42.9
MBI07_g09258_MAGBIO Magnolia biondii HOM05D000090 ORTHO05D001584 2.7e-08 62.4 74 40.5
Potri.001G016300 Populus trichocarpa HOM05D000090 ORTHO05D001584 2.7e-08 62.4 75 42.7
Ciclev10015045m.g Citrus clementina HOM05D000090 ORTHO05D001584 4.5e-08 61.6 81 40.7
Ciclev10016844m.g Citrus clementina HOM05D000090 ORTHO05D001584 5.9e-08 61.2 81 40.7
Ciclev10015019m.g Citrus clementina HOM05D000090 ORTHO05D001584 7.7e-08 60.8 77 40.3
Peaxi162Scf00004g03213 Petunia axillaris HOM05D000090 ORTHO05D001584 7.7e-08 60.8 75 46.7
CSS0046735 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D001584 1.0e-07 60.5 73 42.5
Haze_02093 Corylus avellana HOM05D000090 ORTHO05D001584 1.0e-07 60.5 81 39.5
SalBow6G1484 Salvia bowleyana HOM05D000090 ORTHO05D001584 1.0e-07 60.5 111 32.4
DCAR_020521 Daucus carota HOM05D000090 ORTHO05D001584 1.3e-07 60.1 77 40.3
CiPaw.14G123300 Carya illinoinensis HOM05D000090 ORTHO05D001584 1.7e-07 59.7 82 46.3
CiPaw.14G123400 Carya illinoinensis HOM05D000090 ORTHO05D001584 1.7e-07 59.7 82 46.3
Haze_23058 Corylus avellana HOM05D000090 ORTHO05D001584 1.7e-07 59.7 114 37.7
Nitab4.5_0003430g0060 Nicotiana tabacum HOM05D000090 ORTHO05D001584 2.9e-07 58.9 90 40.0
TWI31G1347 Tripterygium wilfordii HOM05D000090 ORTHO05D001584 2.9e-07 58.9 75 40.0
Ciclev10017842m.g Citrus clementina HOM05D000090 ORTHO05D001584 3.8e-07 58.5 77 39.0
LjContig00564g0020916 Lotus japonicus HOM05D000090 ORTHO05D001584 8.6e-07 57.4 93 40.9
PGSC0003DMG401017077 Solanum tuberosum HOM05D000090 ORTHO05D001584 8.6e-07 57.4 77 37.7
PGSC0003DMG402017077 Solanum tuberosum HOM05D000090 ORTHO05D001584 8.6e-07 57.4 77 37.7
CANSAT01G0318 Cannabis sativa HOM05D000090 ORTHO05D001584 1.1e-06 57.0 77 39.0
Cpa.g.sc84.97 Carica papaya HOM05D000090 ORTHO05D001584 1.1e-06 57.0 77 41.6
MBI18_g33704_MAGBIO Magnolia biondii HOM05D000090 ORTHO05D001584 1.1e-06 57.0 100 35.0
Nitab4.5_0000161g0150 Nicotiana tabacum HOM05D000090 ORTHO05D001584 1.1e-06 57.0 80 38.8
PGR142G2155 Punica granatum HOM05D000090 ORTHO05D001584 1.5e-06 56.6 75 40.0
ClCG07G016690 Citrullus lanatus HOM05D000090 ORTHO05D001584 1.9e-06 56.2 85 35.3
QL11p052498 Quercus lobata HOM05D000090 ORTHO05D001584 1.9e-06 56.2 84 36.9
PSO339G1398 Papaver somniferum HOM05D000090 ORTHO05D001584 2.5e-06 55.8 98 37.8
PGR142G4182 Punica granatum HOM05D000090 ORTHO05D001584 2.5e-06 55.8 81 37.0
MBI07_g21070_MAGBIO Magnolia biondii HOM05D000090 ORTHO05D001584 3.3e-06 55.5 79 34.2
Nn1g08237 Nelumbo nucifera HOM05D000090 ORTHO05D001584 3.3e-06 55.5 80 38.8
Gohir.D02G013500 Gossypium hirsutum HOM05D000090 ORTHO05D001584 4.2e-06 55.1 77 40.3
Gorai.005G017000 Gossypium raimondii HOM05D000090 ORTHO05D001584 4.2e-06 55.1 77 40.3
TWI31G0963 Tripterygium wilfordii HOM05D000090 ORTHO05D001584 4.2e-06 55.1 75 38.7
Zm00001eb294040 Zea mays HOM05D000090 ORTHO05D001584 4.2e-06 55.1 70 38.6
AT5G12890 Arabidopsis thaliana HOM05D000090 ORTHO05D001584 5.5e-06 54.7 74 40.5
Nn7g36076 Nelumbo nucifera HOM05D000090 ORTHO05D001584 5.5e-06 54.7 71 38.0
AL6G23450 Arabidopsis lyrata HOM05D000090 ORTHO05D001584 7.2e-06 54.3 80 37.5
Gohir.A02G012800 Gossypium hirsutum HOM05D000090 ORTHO05D001584 7.2e-06 54.3 77 40.3
PSO384G5071 Papaver somniferum HOM05D000090 ORTHO05D001584 7.2e-06 54.3 81 37.0
CANSAT54G0872 Cannabis sativa HOM05D000090 ORTHO05D001584 9.5e-06 53.9 87 34.5
MELO3C017673.2 Cucumis melo HOM05D000090 ORTHO05D001584 9.5e-06 53.9 85 35.3
MBI18_g25944_MAGBIO Magnolia biondii HOM05D000090 ORTHO05D001584 9.5e-06 53.9 74 37.8
Nn5g27196 Nelumbo nucifera HOM05D000090 ORTHO05D001584 9.5e-06 53.9 87 35.6


User provided reference genes

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