Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 7.4e-144 513.8 257 100.0
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 3.0e-113 412.1 247 83.0
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 5.2e-113 411.4 254 82.7
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.2e-112 410.2 255 80.0
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 1.2e-109 400.2 264 77.3
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 1.2e-109 400.2 251 78.5
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.6e-109 399.8 234 84.6
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.7e-103 379.8 245 78.0
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 4.9e-103 378.3 255 73.7
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 2.4e-102 375.9 257 70.4
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 7.0e-102 374.4 258 71.3
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 2.0e-101 372.9 255 73.3
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 2.7e-101 372.5 240 75.8
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.7e-101 372.5 249 75.5
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 3.5e-101 372.1 243 76.1
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 1.0e-100 370.5 257 70.8
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 2.3e-100 369.4 238 76.1
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 8.6e-100 367.5 253 75.1
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 3.3e-99 365.5 245 73.9
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 4.3e-99 365.2 235 77.4
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 5.6e-99 364.8 285 67.4
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 9.5e-99 364.0 244 73.0
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 9.5e-99 364.0 244 73.4
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 2.8e-98 362.5 232 78.0
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 4.7e-98 361.7 246 74.0
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 4.7e-98 361.7 243 74.5
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 4.7e-98 361.7 243 74.5
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 8.0e-98 360.9 243 74.1
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 1.4e-97 360.1 239 74.5
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 1.8e-97 359.8 252 71.0
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 8.9e-97 357.5 240 72.9
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 1.2e-96 357.1 245 74.3
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 1.2e-96 357.1 246 73.2
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 1.2e-96 357.1 239 71.5
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 2.6e-96 355.9 281 65.5
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 9.8e-96 354.0 240 72.5
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 9.8e-96 354.0 245 73.5
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 1.3e-95 353.6 253 72.3
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.7e-95 353.2 240 71.7
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 1.7e-95 353.2 255 70.6
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 2.2e-95 352.8 242 73.6
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 2.2e-95 352.8 256 69.1
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 2.9e-95 352.4 255 69.8
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 3.7e-95 352.1 240 72.5
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 6.4e-95 351.3 256 68.8
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 6.4e-95 351.3 243 72.0
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 8.3e-95 350.9 255 70.2
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 3.2e-94 349.0 255 69.4
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 2.0e-93 346.3 235 74.9
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 2.3e-92 342.8 247 72.9
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 3.0e-92 342.4 238 73.1
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 3.0e-92 342.4 254 68.5
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 1.9e-91 339.7 233 75.1
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 3.3e-91 339.0 257 68.9
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 9.5e-91 337.4 238 69.7
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 1.2e-90 337.0 231 71.9
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 1.6e-90 336.7 245 66.9
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.6e-90 336.7 273 64.8
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 3.6e-90 335.5 273 64.5
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 4.7e-90 335.1 272 64.3
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 4.7e-90 335.1 257 68.1
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 1.0e-89 334.0 255 67.1
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 1.8e-89 333.2 257 68.5
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 4.0e-89 332.0 259 64.9
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 4.0e-89 332.0 248 68.5
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.2e-88 330.5 272 63.6
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 1.5e-88 330.1 260 64.2
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 2.0e-88 329.7 259 64.9
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 2.6e-88 329.3 256 64.5
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 3.4e-88 328.9 253 65.2
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 7.5e-88 327.8 246 67.5
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 1.3e-87 327.0 271 64.2
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 2.2e-87 326.2 254 64.6
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 4.9e-87 325.1 218 73.4
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 1.4e-86 323.6 238 66.4
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 1.9e-86 323.2 256 62.9
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 1.9e-86 323.2 255 65.1
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 1.9e-86 323.2 255 65.1
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 3.2e-86 322.4 258 62.0
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.2e-86 322.4 259 62.9
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.2e-86 322.4 259 62.9
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 5.4e-86 321.6 246 64.6
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 1.6e-85 320.1 268 63.8
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 1.3e-84 317.0 229 68.1
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 1.7e-84 316.6 229 68.1
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 2.5e-83 312.8 263 60.8
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 2.8e-82 309.3 268 60.8
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 3.1e-81 305.8 256 60.5
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 4.9e-79 298.5 241 65.6
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 2.4e-78 296.2 247 57.5
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 2.4e-78 296.2 283 55.5
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 5.4e-78 295.0 251 57.8
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 1.2e-77 293.9 248 65.3
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 1.6e-77 293.5 284 55.3
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 1.3e-76 290.4 224 66.1
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 4.4e-72 275.4 251 57.4
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 1.6e-69 266.9 191 69.1
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 3.4e-64 249.2 180 68.3
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 8.4e-55 218.0 223 54.3
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 4.2e-54 215.7 275 45.5
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 3.5e-53 212.6 255 50.2
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 6.0e-53 211.8 130 76.9
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 2.3e-52 209.9 271 43.2
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 5.8e-48 195.3 121 74.4
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 3.8e-47 192.6 257 50.6
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 5.6e-43 178.7 244 44.3
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 3.4e-40 169.5 172 48.8
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 1.3e-34 151.0 121 60.3
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 1.9e-30 137.1 125 56.8
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.5e-30 136.7 152 53.9
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 9.4e-22 108.2 110 57.3
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 4.4e-19 99.4 139 36.7
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 5.7e-19 99.0 124 47.6
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 3.8e-15 86.3 44 86.4
Actinidia36204 Actinidia chinensis HOM05D006878 ORTHO05D008579 7.0e-09 65.5 74 55.4
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 7.0e-09 65.5 66 47.0
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.6e-08 64.3 38 78.9
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 2.9e-07 60.1 143 35.7


User provided reference genes

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