Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia04525 Actinidia chinensis HOM05D000092 ORTHO05D011739 7.5e-59 230.3 118 100.0
Actinidia20282 Actinidia chinensis HOM05D000092 ORTHO05D000042 1.2e-35 153.3 98 79.6
vmacro07862 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 3.9e-23 111.7 92 64.1
vmacro22526 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 5.1e-23 111.3 92 65.2
Rhsim04G0094600 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.5e-22 109.8 107 56.1
Rhsim03G0012300 Rhododendron simsii HOM05D000228 ORTHO05D005112 8.1e-21 104.0 111 50.5
Rhsim03G0015700 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.0e-19 99.4 111 48.6
RhsimUnG0150300 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.7e-18 96.3 83 56.6
Rhsim03G0023800 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.2e-18 95.9 96 54.2
Rhsim05G0135000 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.4e-17 92.4 94 53.2
Rhsim03G0014900 Rhododendron simsii HOM05D000997 ORTHO05D000828 5.4e-17 91.3 111 46.8
Rhsim03G0020800 Rhododendron simsii HOM05D000092 ORTHO05D000042 5.4e-17 91.3 94 52.1
Rhsim03G0015200 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.6e-16 89.7 107 45.8
Rhsim03G0014300 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.0e-16 87.8 83 53.0
Rhsim03G0015100 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.0e-15 87.0 107 43.0
RhsimUnG0106800 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.8e-15 86.3 83 51.8
Rhsim03G0015000 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.3e-15 85.9 83 51.8
Rhsim03G0017100 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.3e-15 85.9 83 51.8
Rhsim12G0031200 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.3e-15 85.9 107 43.9
vmacro07866 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 3.0e-15 85.5 107 45.8
vmacro23451 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 3.0e-15 85.5 107 45.8
vmacro07863 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 7.4e-14 80.9 92 44.6
Actinidia24802 Actinidia chinensis HOM05D000092 ORTHO05D011739 2.1e-13 79.3 68 60.3
Rhsim03G0017300 Rhododendron simsii HOM05D000092 ORTHO05D000042 9.0e-12 73.9 96 43.8
Rhsim01G0020600 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.5e-11 73.2 92 47.8
RhsimUnG0164800 Rhododendron simsii HOM05D000997 ORTHO05D000828 1.5e-11 73.2 92 46.7
Rhsim03G0016800 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.0e-11 72.8 107 39.3
CSS0029815 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.6e-11 72.4 98 37.8
Rhsim05G0218300 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.7e-10 69.7 98 39.8
Rhsim05G0217600 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.4e-10 67.8 98 36.7
Rhsim05G0065200 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.4e-09 65.9 98 35.7
Rhsim05G0218900 Rhododendron simsii HOM05D000092 ORTHO05D000042 9.3e-09 63.9 98 35.7
CSS0009386 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.7e-08 62.4 98 35.7
CSS0037245 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.7e-08 62.4 98 35.7
Rhsim05G0218700 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.7e-08 62.4 98 34.7
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.0e-07 58.9 98 34.7
vmacro09348 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 3.9e-07 58.5 98 33.7
Actinidia16423 Actinidia chinensis HOM05D000092 ORTHO05D000042 5.1e-07 58.2 108 34.3
Rhsim04G0055200 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.5e-06 56.6 94 35.1
Atru.chr1.1013 Acer truncatum HOM05D000092 ORTHO05D000042 1.9e-06 56.2 99 31.3
Rhsim04G0054600 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.9e-06 56.2 94 35.1
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.9e-06 56.2 98 32.7
Dinv05440 Davidia involucrata HOM05D000092 ORTHO05D000042 3.3e-06 55.5 86 36.0


User provided reference genes

Program Settings