Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia04046 Actinidia chinensis HOM05D000096 ORTHO05D023301 1.5e-59 232.6 119 100.0
Rhsim11G0005800 Rhododendron simsii HOM05D000096 ORTHO05D000045 4.2e-25 118.2 78 70.5
RhsimUnG0164500 Rhododendron simsii HOM05D000096 ORTHO05D000045 4.2e-25 118.2 78 70.5
Rhsim02G0093600 Rhododendron simsii HOM05D000096 ORTHO05D000045 9.3e-25 117.1 78 69.2
Rhsim02G0030300 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.2e-24 116.7 78 70.5
Rhsim02G0193900 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.1e-24 115.9 78 69.2
Rhsim02G0194000 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.1e-24 115.9 78 69.2
Rhsim06G0045600 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.7e-24 115.5 78 69.2
Rhsim12G0094200 Rhododendron simsii HOM05D000096 ORTHO05D000045 3.5e-24 115.2 78 69.2
Rhsim04G0168000 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.1e-22 110.2 78 66.7
Rhsim07G0256200 Rhododendron simsii HOM05D000096 ORTHO05D000045 4.3e-22 108.2 77 66.2
Actinidia03819 Actinidia chinensis HOM05D000096 ORTHO05D000045 2.2e-21 105.9 54 88.9
Rhsim07G0181300 Rhododendron simsii HOM05D000096 ORTHO05D000045 4.8e-21 104.8 118 50.0
Rhsim07G0171400 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.4e-20 103.2 78 62.8
Rhsim11G0017500 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.4e-20 102.4 78 61.5
PSO013G0028 Papaver somniferum HOM05D000096 ORTHO05D000045 5.3e-20 101.3 80 60.0
Rhsim09G0095900 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.2e-19 100.1 78 62.8
PSO210G7736 Papaver somniferum HOM05D000096 ORTHO05D000045 4.5e-19 98.2 80 58.8
Rhsim01G0084900 Rhododendron simsii HOM05D000096 ORTHO05D000045 7.7e-19 97.4 77 61.0
Rhsim07G0140000 Rhododendron simsii HOM05D000096 ORTHO05D000045 7.7e-19 97.4 72 63.9
Aqoxy7G03021 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 1.7e-18 96.3 64 68.8
Rhsim11G0010600 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.7e-18 96.3 77 61.0
Aqoxy4G02573 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 1.1e-17 93.6 78 59.0
PSO170G1256 Papaver somniferum HOM05D000096 ORTHO05D000045 1.1e-17 93.6 80 57.5
PSO017G1169 Papaver somniferum HOM05D000096 ORTHO05D000045 2.5e-17 92.4 79 59.5
PSO334G0005 Papaver somniferum HOM05D000096 ORTHO05D000045 3.2e-17 92.0 79 57.0
PSO334G0010 Papaver somniferum HOM05D000096 ORTHO05D000045 3.2e-17 92.0 79 57.0
PSO782G1459 Papaver somniferum HOM05D000096 ORTHO05D000045 4.2e-17 91.7 79 58.2
PSO764G0164 Papaver somniferum HOM05D000096 ORTHO05D000045 1.6e-16 89.7 79 58.2
PSO339G0110 Papaver somniferum HOM05D000096 ORTHO05D000045 7.9e-16 87.4 80 55.0
PSO478G5196 Papaver somniferum HOM05D000096 ORTHO05D000045 1.1e-14 83.6 70 58.6
Rhsim02G0174600 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.5e-14 83.2 47 78.7
Rhsim09G0191900 Rhododendron simsii HOM05D000096 ORTHO05D000045 3.3e-14 82.0 66 59.1
PSO339G0459 Papaver somniferum HOM05D000096 ORTHO05D000045 9.7e-14 80.5 78 48.7
PSO761G0635 Papaver somniferum HOM05D000096 ORTHO05D000045 2.2e-13 79.3 67 53.7
PSO017G0605 Papaver somniferum HOM05D000096 ORTHO05D000045 2.8e-13 79.0 70 55.7
PSO832G3193 Papaver somniferum HOM05D000096 ORTHO05D000045 3.7e-13 78.6 78 48.7
Actinidia16630 Actinidia chinensis HOM05D000096 ORTHO05D023301 1.4e-12 76.6 51 84.3
Actinidia27555 Actinidia chinensis HOM05D000096 ORTHO05D023301 3.1e-12 75.5 51 84.3
PSO063G3336 Papaver somniferum HOM05D000096 ORTHO05D000045 1.2e-11 73.6 79 44.3
Dinv06453 Davidia involucrata HOM05D000096 ORTHO05D000045 2.2e-10 69.3 69 46.4
TPR.G1782 Trifolium pratense HOM05D000096 ORTHO05D000045 8.5e-10 67.4 68 45.6
Rhsim05G0183800 Rhododendron simsii HOM05D000190 ORTHO05D000113 1.1e-09 67.0 80 45.0
CARHR180190 Cardamine hirsuta HOM05D000096 ORTHO05D000045 5.5e-09 64.7 65 46.2
Dinv21969 Davidia involucrata HOM05D000096 ORTHO05D000045 5.5e-09 64.7 69 44.9
ECA246G1553 Erigeron canadensis HOM05D000006 ORTHO05D000045 5.5e-09 64.7 79 39.2
THA.LOC104810180 Tarenaya hassleriana HOM05D000096 ORTHO05D000045 5.5e-09 64.7 59 50.8
SGA_v2.0_scaffold100G29549 Striga asiatica HOM05D000096 ORTHO05D000045 7.2e-09 64.3 65 47.7
BraA02t06573Z Brassica rapa HOM05D000096 ORTHO05D000045 9.4e-09 63.9 59 52.5
Hma1.2p1_0151F.1_g067580 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 9.4e-09 63.9 65 46.2
ECA248G1544 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-08 63.5 90 38.9
Psat4g139960 Pisum sativum HOM05D013709 ORTHO05D000045 1.2e-08 63.5 64 46.9
A07p02910 Brassica napus HOM05D000096 ORTHO05D000045 3.6e-08 62.0 59 49.2
A10p14220 Brassica napus HOM05D000096 ORTHO05D000045 3.6e-08 62.0 59 49.2
C05p05820 Brassica napus HOM05D000096 ORTHO05D000045 3.6e-08 62.0 59 49.2
Aa31sc958G10 Aethionema arabicum HOM05D000096 ORTHO05D000045 4.7e-08 61.6 65 47.7
Aqoxy2G02130 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 4.7e-08 61.6 65 46.2
C09p33260 Brassica napus HOM05D000096 ORTHO05D000045 4.7e-08 61.6 104 31.7
Sp4g07030 Schrenkiella parvula HOM05D000096 ORTHO05D000045 4.7e-08 61.6 59 47.5
TPR.G20278 Trifolium pratense HOM05D000096 ORTHO05D000045 4.7e-08 61.6 68 41.2
BolC1t00851H Brassica oleracea HOM05D000096 ORTHO05D000045 6.1e-08 61.2 59 49.2
ECA236G4996 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.1e-08 61.2 76 36.8
ECA238G4469 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.1e-08 61.2 76 38.2
C08p08070 Brassica napus HOM05D000096 ORTHO05D000045 7.9e-08 60.8 104 30.8
BolC8t47657H Brassica oleracea HOM05D000096 ORTHO05D000045 7.9e-08 60.8 104 30.8
Rhsim09G0058900 Rhododendron simsii HOM05D000096 ORTHO05D000045 7.9e-08 60.8 50 60.0
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 7.9e-08 60.8 65 41.5
Sp5g19650 Schrenkiella parvula HOM05D000096 ORTHO05D000045 1.0e-07 60.5 59 45.8
TPR.G34078 Trifolium pratense HOM05D000096 ORTHO05D000045 1.0e-07 60.5 66 43.9
C03p67810 Brassica napus HOM05D000096 ORTHO05D000045 1.4e-07 60.1 59 44.1
TWI53G1883 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 1.4e-07 60.1 65 41.5
Zm00001eb371690 Zea mays HOM05D000096 ORTHO05D000045 1.4e-07 60.1 65 44.6
Zm00001eb392780 Zea mays HOM05D000096 ORTHO05D000045 1.4e-07 60.1 65 44.6
Zm00001eb392790 Zea mays HOM05D000096 ORTHO05D000045 1.4e-07 60.1 65 44.6
BolC9t54863H Brassica oleracea HOM05D000096 ORTHO05D000045 1.8e-07 59.7 65 46.2
ECA247G1956 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.8e-07 59.7 79 36.7
Glyma.18G152100 Glycine max HOM05D000096 ORTHO05D000045 1.8e-07 59.7 75 42.7
Psat5g170160 Pisum sativum HOM05D000096 ORTHO05D000045 1.8e-07 59.7 68 42.6
CARHR159320 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.3e-07 59.3 65 40.0
ECA232G1482 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.3e-07 59.3 75 40.0
ECA236G3020 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.3e-07 59.3 75 40.0
Lalb_Chr02g0157071 Lupinus albus HOM05D000096 ORTHO05D000045 2.3e-07 59.3 73 43.8
Sp7g08990 Schrenkiella parvula HOM05D000096 ORTHO05D000045 2.3e-07 59.3 65 44.6
Hund29376 Selenicereus undatus HOM05D000096 ORTHO05D000045 2.3e-07 59.3 63 44.4
Hund29377 Selenicereus undatus HOM05D000096 ORTHO05D000045 2.3e-07 59.3 63 44.4
A06p13180 Brassica napus HOM05D000096 ORTHO05D000045 3.0e-07 58.9 72 40.3
C05p16340 Brassica napus HOM05D000096 ORTHO05D000045 3.0e-07 58.9 72 40.3
C05p40500 Brassica napus HOM05D000096 ORTHO05D000045 3.0e-07 58.9 72 40.3
BolC3t20489H Brassica oleracea HOM05D000096 ORTHO05D000045 3.0e-07 58.9 72 40.3
Sp5g17390 Schrenkiella parvula HOM05D000096 ORTHO05D000045 3.0e-07 58.9 59 45.8
Sp7g01850 Schrenkiella parvula HOM05D000096 ORTHO05D000045 3.0e-07 58.9 74 39.2
SpUn0166_0010 Schrenkiella parvula HOM05D000096 ORTHO05D000045 3.0e-07 58.9 59 45.8
THA.LOC104814022 Tarenaya hassleriana HOM05D000096 ORTHO05D000045 3.0e-07 58.9 52 51.9
TWI38G2100 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 3.0e-07 58.9 65 40.0
Aqoxy5G01703 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 3.9e-07 58.5 52 59.6
A01p17030 Brassica napus HOM05D000096 ORTHO05D000045 3.9e-07 58.5 104 29.8
C06p06960 Brassica napus HOM05D000096 ORTHO05D000045 3.9e-07 58.5 62 41.9
BraA09t39509Z Brassica rapa HOM05D000096 ORTHO05D000045 3.9e-07 58.5 104 29.8
Lj4g0021004 Lotus japonicus HOM05D000096 ORTHO05D000045 3.9e-07 58.5 77 37.7
Zm00001eb227270 Zea mays HOM05D000096 ORTHO05D000045 3.9e-07 58.5 62 46.8
ECA233G1394 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.1e-07 58.2 76 36.8
TPR.G21912 Trifolium pratense HOM05D000096 ORTHO05D000045 5.1e-07 58.2 68 39.7
ECA233G5779 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.7e-07 57.8 61 44.3
ECA236G2655 Erigeron canadensis HOM05D000096 ORTHO05D010576 6.7e-07 57.8 67 44.8
TPR.G27278 Trifolium pratense HOM05D000096 ORTHO05D000045 6.7e-07 57.8 78 35.9
Ah.04g157900 Amaranthus hybridus HOM05D000096 ORTHO05D000045 8.8e-07 57.4 65 43.1
C03p82640 Brassica napus HOM05D000096 ORTHO05D000045 8.8e-07 57.4 72 40.3
C07p35390 Brassica napus HOM05D000096 ORTHO05D000045 8.8e-07 57.4 59 47.5
BraA05t19979Z Brassica rapa HOM05D000096 ORTHO05D000045 8.8e-07 57.4 94 35.1
ECA246G2685 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.8e-07 57.4 75 42.7
Psat0ss28572g0040 Pisum sativum HOM05D000096 ORTHO05D000045 8.8e-07 57.4 76 39.5
RcHm_v2.0_Chr5g0053341 Rosa chinensis HOM05D000096 ORTHO05D000045 8.8e-07 57.4 65 46.2
RcHm_v2.0_Chr5g0066551 Rosa chinensis HOM05D000096 ORTHO05D000045 8.8e-07 57.4 65 46.2
QL09p000096 Quercus lobata HOM05D000096 ORTHO05D000045 1.1e-06 57.0 63 41.3
C01p15660 Brassica napus HOM05D000096 ORTHO05D000045 1.5e-06 56.6 64 42.2
BolC1t01519H Brassica oleracea HOM05D000096 ORTHO05D000045 1.5e-06 56.6 64 42.2
CARHR106310 Cardamine hirsuta HOM05D000096 ORTHO05D000045 1.5e-06 56.6 51 47.1
COL.COLO4_07316 Corchorus olitorius HOM05D000096 ORTHO05D000045 1.5e-06 56.6 63 46.0
FvH4_3g02850 Fragaria vesca HOM05D000096 ORTHO05D000045 1.5e-06 56.6 62 43.5
Hma1.2p1_1247F.1_g270180 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.5e-06 56.6 96 35.4
Sp4g08150 Schrenkiella parvula HOM05D000096 ORTHO05D000045 1.5e-06 56.6 59 44.1
BolC6t36659H Brassica oleracea HOM05D000096 ORTHO05D000045 2.0e-06 56.2 94 35.1
COL.COLO4_06124 Corchorus olitorius HOM05D000096 ORTHO05D000045 2.0e-06 56.2 59 45.8
ECA238G0298 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-06 56.2 62 43.5
ECA238G3552 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-06 56.2 76 35.5
FvH4_2g06413 Fragaria vesca HOM05D000096 ORTHO05D000045 2.0e-06 56.2 65 44.6
Sp1g34290 Schrenkiella parvula HOM05D000096 ORTHO05D000045 2.0e-06 56.2 65 41.5
Hund01379 Selenicereus undatus HOM05D000096 ORTHO05D000045 2.0e-06 56.2 59 45.8
Hund09895 Selenicereus undatus HOM05D000096 ORTHO05D000045 2.0e-06 56.2 59 45.8
THA.LOC104804874 Tarenaya hassleriana HOM05D000096 ORTHO05D000045 2.0e-06 56.2 48 52.1
A05p21280 Brassica napus HOM05D000096 ORTHO05D010037 2.6e-06 55.8 73 41.1
C04p29840 Brassica napus HOM05D000096 ORTHO05D000045 2.6e-06 55.8 59 47.5
C05p53320 Brassica napus HOM05D000096 ORTHO05D000045 2.6e-06 55.8 73 41.1
COL.COLO4_14941 Corchorus olitorius HOM05D000096 ORTHO05D000045 2.6e-06 55.8 65 40.0
FvH4_3g10331 Fragaria vesca HOM05D000096 ORTHO05D000045 2.6e-06 55.8 62 43.5
Glyma.10G108181 Glycine max HOM05D000096 ORTHO05D000045 2.6e-06 55.8 73 41.1
Glyma.20G059700 Glycine max HOM05D000096 ORTHO05D000045 2.6e-06 55.8 73 43.8
Hma1.2p1_1397F.1_g280770 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.6e-06 55.8 96 35.4
QL05p058503 Quercus lobata HOM05D000096 ORTHO05D000045 2.6e-06 55.8 62 43.5
Ciclev10003309m.g Citrus clementina HOM05D000096 ORTHO05D000045 3.3e-06 55.5 72 36.1
COL.COLO4_36803 Corchorus olitorius HOM05D000096 ORTHO05D000045 3.3e-06 55.5 65 43.1
FvH4_6g21911 Fragaria vesca HOM05D000096 ORTHO05D000045 3.3e-06 55.5 62 41.9
TPR.G14206 Trifolium pratense HOM05D000096 ORTHO05D000045 3.3e-06 55.5 72 40.3
TWI56G0481 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 3.3e-06 55.5 73 43.8
C04p53430 Brassica napus HOM05D000096 ORTHO05D000045 4.4e-06 55.1 94 34.0
COL.COLO4_36339 Corchorus olitorius HOM05D000096 ORTHO05D000045 4.4e-06 55.1 65 43.1
ECA247G2253 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.4e-06 55.1 59 44.1
TPR.G22667 Trifolium pratense HOM05D000096 ORTHO05D000045 4.4e-06 55.1 66 39.4
A02p19480 Brassica napus HOM05D000096 ORTHO05D000045 5.7e-06 54.7 70 42.9
C03p18670 Brassica napus HOM05D000096 ORTHO05D000045 5.7e-06 54.7 73 35.6
C05p47710 Brassica napus HOM05D000096 ORTHO05D027797 5.7e-06 54.7 96 35.4
C09p27110 Brassica napus HOM05D000096 ORTHO05D000045 5.7e-06 54.7 73 35.6
BolC2t09237H Brassica oleracea HOM05D000096 ORTHO05D000045 5.7e-06 54.7 70 42.9
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 5.7e-06 54.7 95 35.8
BolC3t14259H Brassica oleracea HOM05D000096 ORTHO05D000045 5.7e-06 54.7 73 35.6
BolC8t47057H Brassica oleracea HOM05D000096 ORTHO05D000045 5.7e-06 54.7 73 35.6
BraA09t40036Z Brassica rapa HOM05D000096 ORTHO05D000045 5.7e-06 54.7 94 34.0
COL.COLO4_37635 Corchorus olitorius HOM05D000096 ORTHO05D000045 5.7e-06 54.7 61 45.9
ECA248G2731 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.7e-06 54.7 61 42.6
Sp7g02850 Schrenkiella parvula HOM05D000096 ORTHO05D000045 5.7e-06 54.7 59 42.4
Hund03638 Selenicereus undatus HOM05D000096 ORTHO05D000045 5.7e-06 54.7 59 44.1
TPR.G20413 Trifolium pratense HOM05D000096 ORTHO05D000045 5.7e-06 54.7 69 39.1
A09p01250 Brassica napus HOM05D000096 ORTHO05D000045 7.4e-06 54.3 64 42.2
C04p61830 Brassica napus HOM05D000096 ORTHO05D000045 7.4e-06 54.3 59 42.4
BolC3t18801H Brassica oleracea HOM05D000096 ORTHO05D000045 7.4e-06 54.3 59 44.1
Glyma.15G190000 Glycine max HOM05D000096 ORTHO05D000045 7.4e-06 54.3 72 37.5
RcHm_v2.0_Chr2g0095281 Rosa chinensis HOM05D000096 ORTHO05D000045 7.4e-06 54.3 59 44.1
BolC6t35821H Brassica oleracea HOM05D000096 ORTHO05D000045 9.7e-06 53.9 59 44.1
ECA232G0493 Erigeron canadensis HOM05D000096 ORTHO05D014619 9.7e-06 53.9 68 41.2
Psat0s3648g0080 Pisum sativum HOM05D000096 ORTHO05D000045 9.7e-06 53.9 51 49.0


User provided reference genes

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