Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.8e-72 275.8 137 100.0
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.1e-66 256.5 128 98.4
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 2.1e-57 225.7 127 85.0
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 3.7e-57 224.9 129 81.4
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 8.2e-57 223.8 128 82.0
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.1e-56 223.4 128 83.6
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 2.4e-56 222.2 128 83.6
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 5.3e-56 221.1 128 82.0
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 6.9e-56 220.7 128 82.8
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.2e-55 219.9 128 82.8
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 3.4e-55 218.4 128 82.8
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.5e-55 218.0 128 80.5
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 1.3e-54 216.5 127 80.3
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.2e-54 215.7 128 80.5
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 3.8e-54 214.9 131 78.6
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 3.8e-54 214.9 131 79.4
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.9e-54 214.5 126 81.7
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 4.9e-54 214.5 129 80.6
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 6.5e-54 214.2 131 78.6
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 6.5e-54 214.2 127 78.7
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 1.9e-53 212.6 135 75.6
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 2.5e-53 212.2 128 79.7
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 3.2e-53 211.8 128 78.9
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 3.2e-53 211.8 128 78.9
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 7.1e-53 210.7 128 77.3
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 7.1e-53 210.7 128 78.1
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.6e-52 209.5 128 79.7
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 2.1e-52 209.1 130 76.9
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.1e-52 209.1 129 79.1
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.1e-52 209.1 129 79.1
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 2.7e-52 208.8 128 75.0
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 3.5e-52 208.4 117 83.8
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 4.6e-52 208.0 128 76.6
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 4.6e-52 208.0 134 76.1
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 6.0e-52 207.6 128 77.3
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.0e-52 207.6 128 78.9
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 6.0e-52 207.6 138 72.5
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 7.9e-52 207.2 128 78.9
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.0e-51 206.8 130 76.2
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 1.0e-51 206.8 130 75.4
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 1.3e-51 206.5 128 78.1
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.3e-51 206.5 128 78.1
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.8e-51 206.1 129 76.7
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.8e-51 206.1 130 76.2
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.8e-51 206.1 128 76.6
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 2.3e-51 205.7 130 74.6
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 2.3e-51 205.7 129 76.7
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 2.3e-51 205.7 133 72.9
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 3.0e-51 205.3 131 76.3
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.9e-51 204.9 130 76.2
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 3.9e-51 204.9 130 76.2
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 5.1e-51 204.5 134 74.6
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 5.1e-51 204.5 125 78.4
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 5.1e-51 204.5 132 75.0
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 6.7e-51 204.1 128 76.6
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 6.7e-51 204.1 129 76.0
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 8.7e-51 203.8 128 74.2
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.1e-50 203.4 128 75.8
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 1.1e-50 203.4 129 76.0
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.1e-50 203.4 129 76.0
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 1.5e-50 203.0 130 75.4
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.5e-50 203.0 130 73.1
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.5e-50 203.0 133 74.4
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.9e-50 202.6 128 73.4
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 1.9e-50 202.6 129 76.0
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 2.5e-50 202.2 139 71.9
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 4.3e-50 201.4 133 73.7
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 4.3e-50 201.4 125 77.6
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 5.7e-50 201.1 128 74.2
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 7.4e-50 200.7 131 71.8
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 9.7e-50 200.3 129 74.4
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.3e-49 199.9 130 70.8
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 1.6e-49 199.5 128 75.0
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.6e-49 199.5 125 76.8
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 3.7e-49 198.4 127 72.4
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 3.7e-49 198.4 125 76.0
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 4.8e-49 198.0 131 74.0
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 4.8e-49 198.0 125 75.2
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.8e-48 196.1 134 73.1
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 2.4e-48 195.7 129 74.4
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 4.1e-48 194.9 122 74.6
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 9.0e-48 193.7 129 74.4
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.2e-47 193.4 129 71.3
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 2.6e-47 192.2 125 73.6
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 3.4e-47 191.8 135 70.4
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 1.0e-46 190.3 131 71.8
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 2.2e-46 189.1 127 70.9
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 2.2e-46 189.1 127 70.9
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 2.9e-46 188.7 116 75.9
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 6.5e-46 187.6 132 65.2
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 1.9e-45 186.0 126 72.2
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 2.1e-44 182.6 128 69.5
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 2.7e-44 182.2 122 73.0
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 2.7e-44 182.2 122 73.0
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 2.7e-44 182.2 122 73.0
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 2.7e-44 182.2 115 74.8
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 3.6e-44 181.8 130 64.6
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 4.6e-44 181.4 128 69.5
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 1.4e-43 179.9 121 71.9
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 1.4e-43 179.9 121 71.9
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.8e-43 179.5 117 73.5
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 2.3e-43 179.1 117 73.5
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 2.3e-43 179.1 117 73.5
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.1e-42 176.8 117 72.6
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.5e-42 176.4 128 63.3
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 3.3e-42 175.3 117 71.8
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 2.6e-39 165.6 128 60.9
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.4e-35 153.3 130 60.8
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 2.3e-35 152.5 132 53.8
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 3.0e-35 152.1 102 66.7
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 7.4e-34 147.5 125 56.8
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.2e-31 140.2 131 56.5
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 1.2e-31 140.2 123 52.0
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 2.7e-28 129.0 83 71.1
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 8.8e-27 124.0 117 51.3
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.1e-24 117.1 79 67.1
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.5e-21 106.7 156 46.8
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 3.0e-19 99.0 72 69.4
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 9.7e-18 94.0 50 88.0
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 2.0e-15 86.3 48 81.2
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 5.0e-14 81.6 49 75.5
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 4.2e-13 78.6 60 61.7
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 3.6e-12 75.5 120 37.5
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.8e-09 65.9 138 34.1
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 1.6e-07 60.1 88 42.0


User provided reference genes

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