Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.1e-108 395.6 184 100.0
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.0e-94 350.1 184 88.0
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.4e-90 335.1 184 81.5
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 1.2e-84 316.6 185 77.8
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 2.8e-84 315.5 184 79.3
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 5.2e-83 311.2 184 76.6
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 4.1e-80 301.6 185 74.6
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 2.7e-79 298.9 185 72.4
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 1.7e-78 296.2 187 72.7
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.9e-78 295.0 183 72.7
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.9e-78 295.0 183 72.7
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 4.3e-77 291.6 187 73.8
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 4.3e-77 291.6 183 72.1
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 4.3e-77 291.6 185 73.0
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 4.3e-77 291.6 182 71.4
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 7.3e-77 290.8 160 81.9
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 9.5e-77 290.4 191 72.3
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.2e-76 290.0 184 71.2
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 1.6e-76 289.7 187 72.2
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.6e-76 289.7 183 71.6
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.6e-76 289.7 183 71.0
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 2.1e-76 289.3 185 73.0
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 6.2e-76 287.7 184 71.2
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 6.2e-76 287.7 188 74.5
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 6.2e-76 287.7 184 72.3
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 8.1e-76 287.3 183 71.0
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.1e-75 287.0 185 70.3
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 3.1e-75 285.4 189 73.0
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 4.0e-75 285.0 189 70.9
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 5.2e-75 284.6 185 70.3
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 5.2e-75 284.6 187 73.8
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 1.2e-74 283.5 185 68.6
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 1.5e-74 283.1 190 73.2
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.5e-74 283.1 189 70.9
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 2.6e-74 282.3 187 71.7
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 3.4e-74 282.0 187 70.6
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 4.4e-74 281.6 186 72.0
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 9.9e-74 280.4 183 69.9
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 1.3e-73 280.0 184 70.7
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 1.3e-73 280.0 183 69.9
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.7e-73 279.6 186 68.8
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 2.2e-73 279.3 190 70.0
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.2e-73 279.3 187 69.5
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 2.2e-73 279.3 189 66.7
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 2.9e-73 278.9 182 65.9
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 2.9e-73 278.9 189 66.7
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 8.3e-73 277.3 181 71.3
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.9e-72 276.2 187 68.4
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 4.1e-72 275.0 187 69.0
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 9.2e-72 273.9 183 69.9
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 9.2e-72 273.9 185 69.2
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 2.7e-71 272.3 183 67.8
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 4.6e-71 271.6 185 68.1
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 4.6e-71 271.6 187 66.8
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 6.0e-71 271.2 183 67.8
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 7.8e-71 270.8 184 67.9
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 1.0e-70 270.4 184 67.9
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 1.0e-70 270.4 190 65.8
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 1.3e-70 270.0 183 67.2
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.3e-70 270.0 184 68.5
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 2.3e-70 269.2 189 68.3
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 3.0e-70 268.9 187 70.6
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 3.0e-70 268.9 185 66.5
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 3.9e-70 268.5 191 68.1
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 5.1e-70 268.1 184 68.5
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 5.1e-70 268.1 185 68.6
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 5.1e-70 268.1 185 68.6
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 5.1e-70 268.1 185 68.6
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 5.1e-70 268.1 185 67.0
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 6.6e-70 267.7 182 69.8
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.1e-69 266.9 183 65.0
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 3.3e-69 265.4 182 66.5
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 7.3e-69 264.2 189 66.1
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.2e-68 263.5 189 66.1
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 1.6e-68 263.1 181 67.4
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 1.6e-68 263.1 185 65.4
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 1.6e-68 263.1 185 65.4
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.6e-68 263.1 186 67.2
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.6e-68 263.1 186 67.2
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 2.1e-68 262.7 183 66.1
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 2.1e-68 262.7 189 66.1
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 2.8e-68 262.3 187 67.9
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 4.7e-68 261.5 184 65.2
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 6.2e-68 261.2 181 65.7
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 6.2e-68 261.2 183 65.6
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.8e-67 259.6 186 65.1
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 3.1e-67 258.8 186 66.7
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 5.2e-67 258.1 181 64.1
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 5.2e-67 258.1 181 65.2
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 6.8e-67 257.7 192 64.1
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 2.0e-66 256.1 185 65.9
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 2.6e-66 255.8 184 61.4
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 4.4e-66 255.0 182 66.5
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 5.8e-66 254.6 182 65.4
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 4.9e-65 251.5 183 63.4
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 8.4e-65 250.8 179 64.2
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 1.1e-64 250.4 182 63.7
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 3.2e-64 248.8 190 62.1
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 7.1e-64 247.7 182 61.0
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 9.3e-64 247.3 181 63.5
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 5.1e-62 241.5 182 62.1
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 7.3e-61 237.7 169 65.7
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 1.1e-59 233.8 180 62.2
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 1.7e-57 226.5 186 57.5
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 6.4e-57 224.6 160 64.4
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 6.4e-57 224.6 160 64.4
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.1e-56 223.8 180 59.4
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.2e-55 220.3 180 58.3
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.7e-54 216.5 160 66.2
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 3.6e-52 208.8 158 62.7
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 6.2e-52 208.0 186 53.8
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 5.3e-51 204.9 140 67.1
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 1.7e-49 199.9 131 66.4
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.1e-43 180.6 183 46.4
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 3.0e-38 162.5 78 83.3
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 2.2e-33 146.4 71 80.3
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 6.1e-07 58.5 61 36.1
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 4.0e-06 55.8 151 31.1


User provided reference genes

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