Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia03077 Actinidia chinensis HOM05D006478 ORTHO05D008071 2.3e-48 195.3 101 100.0
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 3.6e-17 91.7 175 42.3
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 7.7e-12 73.9 177 38.4
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.0e-11 73.6 176 36.9
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 1.0e-11 73.6 175 36.0
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 3.2e-10 68.6 175 34.9
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 5.5e-10 67.8 174 35.1
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 5.5e-10 67.8 174 37.4
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 1.2e-09 66.6 160 32.5
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 1.6e-09 66.2 177 34.5
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 6.1e-09 64.3 175 34.9
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 8.0e-09 63.9 173 32.9
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 1.4e-08 63.2 115 43.5
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 1.8e-08 62.8 175 35.4
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 2.3e-08 62.4 119 38.7
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 1.1e-07 60.1 160 33.8
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 1.1e-07 60.1 88 44.3
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 1.1e-07 60.1 170 34.7
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 1.5e-07 59.7 175 31.4
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 2.0e-07 59.3 175 32.0
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 2.6e-07 58.9 175 32.0
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 5.7e-07 57.8 175 33.7
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 5.7e-07 57.8 175 33.1
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 9.7e-07 57.0 174 32.8
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 9.7e-07 57.0 175 33.1
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 1.7e-06 56.2 174 31.0
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.7e-06 56.2 175 34.3
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 2.2e-06 55.8 175 33.7
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.2e-06 55.8 175 32.0
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 2.2e-06 55.8 174 31.0
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 3.7e-06 55.1 175 32.0
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 3.7e-06 55.1 175 31.4
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 3.7e-06 55.1 175 31.4
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 3.7e-06 55.1 29 89.7
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 3.7e-06 55.1 175 31.4
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 6.3e-06 54.3 29 89.7
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 6.3e-06 54.3 175 30.9
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 6.3e-06 54.3 160 31.9
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 6.3e-06 54.3 161 32.9
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 8.2e-06 53.9 175 30.9


User provided reference genes

Program Settings