Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia03033 Actinidia chinensis HOM05D011460 ORTHO05D010383 3.0e-122 441.8 217 100.0
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 2.7e-46 189.5 216 53.7
Actinidia28951 Actinidia chinensis HOM05D011460 ORTHO05D010383 8.1e-35 151.4 184 52.2
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 4.5e-33 145.6 227 44.1
Actinidia26624 Actinidia chinensis HOM05D002163 ORTHO05D002386 1.7e-32 143.7 175 51.4
Oeu026427.1 Olea europaea HOM05D011460 ORTHO05D010383 7.6e-25 118.2 218 39.0
Hma1.2p1_2080F.1_g313480 Hydrangea macrophylla HOM05D011460 ORTHO05D010383 3.2e-23 112.8 223 39.5
Nitab4.5_0021955g0010 Nicotiana tabacum HOM05D011460 ORTHO05D010383 3.3e-20 102.8 215 38.6
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 9.7e-20 101.3 87 62.1
Nitab4.5_0005460g0040 Nicotiana tabacum HOM05D011460 ORTHO05D010383 1.4e-18 97.4 215 35.3
Peaxi162Scf00254g00044 Petunia axillaris HOM05D011460 ORTHO05D010383 7.7e-17 91.7 212 33.0
MSTRG.27468 Avicennia marina HOM05D011460 ORTHO05D010383 1.3e-16 90.9 210 36.2
MSTRG.9176 Avicennia marina HOM05D011460 ORTHO05D010383 1.4e-15 87.4 172 36.6
Migut.F01990 Erythranthe guttata HOM05D011460 ORTHO05D010383 1.9e-15 87.0 228 33.8
Solyc11g008750.1 Solanum lycopersicum HOM05D011460 ORTHO05D010383 2.5e-15 86.7 97 48.5
CiPaw.01G275300 Carya illinoinensis HOM05D010935 ORTHO05D010383 9.4e-15 84.7 204 32.4
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 9.4e-15 84.7 209 32.1
Peaxi162Scf00890g00013 Petunia axillaris HOM05D011460 ORTHO05D010383 8.8e-13 78.2 157 36.9
PGSC0003DMG400016243 Solanum tuberosum HOM05D011460 ORTHO05D010383 1.5e-12 77.4 139 39.6
Lsat_1_v5_gn_2_113841 Lactuca sativa HOM05D011460 ORTHO05D010383 2.2e-11 73.6 95 46.3
DCAR_006457 Daucus carota HOM05D011460 ORTHO05D010383 3.7e-11 72.8 180 33.3
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.1e-10 69.7 205 31.7
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.1e-10 69.7 229 29.3
MD07G1177700 Malus domestica HOM05D010935 ORTHO05D010383 9.1e-10 68.2 207 30.4
Cfa001603 Carpinus fangiana HOM05D010935 ORTHO05D010383 1.5e-09 67.4 197 31.0
MD01G1111500 Malus domestica HOM05D010935 ORTHO05D010383 1.5e-09 67.4 221 31.2
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.6e-09 66.6 231 27.3
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.7e-09 65.1 235 26.4
Duzib114G0652 Durio zibethinus HOM05D010162 ORTHO05D010383 1.7e-08 63.9 208 27.9
Duzib128G1476 Durio zibethinus HOM05D010162 ORTHO05D010383 2.2e-08 63.5 208 29.3
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 5.0e-08 62.4 206 29.1
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.4e-07 60.8 233 27.5
FAN01G2770 Fragaria x ananassa HOM05D010935 ORTHO05D010383 2.5e-07 60.1 220 30.5
FAN06G0306 Fragaria x ananassa HOM05D010935 ORTHO05D010383 2.5e-07 60.1 216 28.7
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.5e-07 60.1 250 26.0
Eucgr.G02810 Eucalyptus grandis HOM05D010935 ORTHO05D010383 3.2e-07 59.7 204 29.4
FAN10G0666 Fragaria x ananassa HOM05D010935 ORTHO05D010383 3.2e-07 59.7 220 30.5
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 5.5e-07 58.9 219 26.5
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 7.2e-07 58.5 229 24.9
RcHm_v2.0_Chr1g0363961 Rosa chinensis HOM05D010935 ORTHO05D010383 7.2e-07 58.5 212 30.7
Sopen11g004530 Solanum pennellii HOM05D011460 ORTHO05D010383 3.6e-06 56.2 81 40.7
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 7.9e-06 55.1 235 25.5


User provided reference genes

Program Settings