Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.3e-243 845.1 416 100.0
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.3e-149 531.9 294 89.5
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.3e-32 142.5 339 31.0
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.8e-30 137.9 365 29.9
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 3.7e-28 130.2 349 27.2
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.0e-25 122.1 182 43.4
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 1.0e-25 122.1 202 41.1
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.3e-25 121.7 328 31.1
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 2.3e-25 120.9 374 28.6
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 3.0e-25 120.6 176 42.0
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 3.0e-25 120.6 184 40.2
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 3.0e-25 120.6 206 35.9
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 8.6e-25 119.0 197 39.1
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 1.5e-24 118.2 194 38.7
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 1.9e-24 117.9 169 43.2
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 1.9e-24 117.9 179 43.0
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 2.5e-24 117.5 206 35.4
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 3.3e-24 117.1 194 38.7
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.2e-23 115.2 324 29.6
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 2.1e-23 114.4 188 37.2
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 4.7e-23 113.2 196 38.3
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 6.2e-23 112.8 179 40.8
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 8.0e-23 112.5 189 38.6
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 1.1e-22 112.1 188 41.5
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.8e-22 111.3 190 37.9
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.3e-22 110.9 177 41.2
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.3e-22 110.9 177 41.2
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 3.1e-22 110.5 180 37.2
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 4.0e-22 110.2 194 35.6
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 6.8e-22 109.4 177 40.7
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 6.8e-22 109.4 190 37.4
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 6.8e-22 109.4 201 34.8
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 8.9e-22 109.0 193 36.8
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 8.9e-22 109.0 199 34.7
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 8.9e-22 109.0 177 40.7
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 8.9e-22 109.0 190 38.4
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.2e-21 108.6 331 30.8
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 1.2e-21 108.6 190 36.3
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 1.2e-21 108.6 182 38.5
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.5e-21 108.2 196 35.2
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.5e-21 108.2 176 39.2
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 2.0e-21 107.8 182 37.9
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 4.4e-21 106.7 186 39.8
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 4.4e-21 106.7 177 39.0
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 5.8e-21 106.3 207 34.3
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 5.8e-21 106.3 194 35.1
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 7.5e-21 105.9 190 36.8
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 1.3e-20 105.1 182 35.2
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.7e-20 104.8 328 26.2
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 1.7e-20 104.8 193 35.2
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.2e-20 104.4 358 25.4
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 2.2e-20 104.4 193 35.2
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 2.2e-20 104.4 177 35.0
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 2.2e-20 104.4 205 34.1
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 2.2e-20 104.4 205 34.1
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 4.9e-20 103.2 189 37.0
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 6.4e-20 102.8 201 34.3
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 6.4e-20 102.8 194 34.0
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 1.9e-19 101.3 179 36.9
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 1.9e-19 101.3 194 35.1
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 3.2e-19 100.5 192 39.1
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 3.2e-19 100.5 182 33.5
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 3.2e-19 100.5 182 34.1
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 7.0e-19 99.4 214 29.9
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 9.2e-19 99.0 200 36.0
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 9.2e-19 99.0 195 34.4
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 1.2e-18 98.6 202 36.6
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 1.2e-18 98.6 198 32.8
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 2.0e-18 97.8 172 37.2
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 2.0e-18 97.8 175 38.3
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 3.5e-18 97.1 174 35.1
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 4.6e-18 96.7 179 33.5
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 7.8e-18 95.9 194 34.0
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.3e-17 95.1 195 32.8
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 1.3e-17 95.1 195 32.3
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 3.9e-17 93.6 179 37.4
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 5.0e-17 93.2 186 33.3
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 1.9e-16 91.3 197 31.5
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 2.5e-16 90.9 171 35.7
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 2.5e-16 90.9 173 35.3
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 7.3e-16 89.4 179 32.4
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 1.2e-15 88.6 181 33.1
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 3.6e-15 87.0 198 34.8
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 3.6e-15 87.0 183 32.8
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 3.1e-14 84.0 275 27.3
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 3.1e-14 84.0 349 28.7
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 4.4e-13 80.1 329 27.7
Manes.10G123525 Manihot esculenta HOM05D007512 ORTHO05D020513 7.5e-13 79.3 346 24.3
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 7.5e-13 79.3 177 31.1
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 3.7e-12 77.0 339 23.9
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 5.4e-11 73.2 171 32.2
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 9.2e-11 72.4 118 38.1
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.1e-10 71.2 179 31.8
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 3.9e-09 67.0 207 26.1
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 6.6e-09 66.2 193 28.5
Ciclev10027164m.g Citrus clementina HOM05D000125 ORTHO05D000120 1.2e-07 62.0 110 31.8
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 2.4e-06 57.8 111 35.1
Gohir.A02G025900 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.1e-06 57.4 135 31.9
Gohir.A02G026300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.1e-06 57.4 137 32.1
Lj1C251T1 Lonicera japonica HOM05D000125 ORTHO05D000120 5.2e-06 56.6 131 30.5


User provided reference genes

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