Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.9e-86 320.9 165 100.0
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.0e-42 175.3 98 93.9
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.4e-39 166.0 107 80.4
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.1e-39 165.2 107 81.3
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.1e-39 165.2 107 81.3
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 7.1e-39 164.5 104 82.7
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 7.1e-39 164.5 98 85.7
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 2.1e-38 162.9 104 81.7
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 2.1e-38 162.9 104 81.7
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 2.1e-38 162.9 104 81.7
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 2.7e-38 162.5 104 79.8
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.7e-38 162.5 92 93.5
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 3.5e-38 162.2 104 80.8
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 3.5e-38 162.2 98 84.7
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 6.0e-38 161.4 104 80.8
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 6.0e-38 161.4 104 80.8
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 1.7e-37 159.8 104 79.8
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.7e-37 159.8 104 78.8
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.3e-37 159.5 107 78.5
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 2.3e-37 159.5 104 78.8
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 2.3e-37 159.5 104 80.8
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 3.0e-37 159.1 104 78.8
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 3.0e-37 159.1 104 78.8
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 3.0e-37 159.1 104 79.8
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.9e-37 158.7 104 78.8
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 5.1e-37 158.3 107 78.5
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 8.6e-37 157.5 104 79.8
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 8.6e-37 157.5 107 76.6
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 8.6e-37 157.5 104 76.9
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 8.6e-37 157.5 107 75.7
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.1e-36 157.1 104 77.9
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.5e-36 156.8 98 83.7
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.5e-36 156.8 98 83.7
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 1.9e-36 156.4 107 75.7
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 2.5e-36 156.0 98 83.7
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.5e-36 156.0 104 77.9
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 2.5e-36 156.0 107 75.7
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 3.3e-36 155.6 104 76.9
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 5.6e-36 154.8 104 76.9
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 7.3e-36 154.5 98 82.7
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 9.6e-36 154.1 92 85.9
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 9.6e-36 154.1 98 81.6
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.2e-35 153.7 98 81.6
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 1.2e-35 153.7 104 76.9
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.2e-35 153.7 104 76.9
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.6e-35 153.3 104 77.9
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 2.1e-35 152.9 104 76.0
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 2.8e-35 152.5 98 78.6
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 3.6e-35 152.1 104 76.0
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 6.2e-35 151.4 104 76.0
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 6.2e-35 151.4 98 79.6
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 6.2e-35 151.4 98 79.6
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 6.2e-35 151.4 107 72.0
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 6.2e-35 151.4 107 72.0
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 8.1e-35 151.0 104 73.1
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 2.4e-34 149.4 98 79.6
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 2.4e-34 149.4 104 74.0
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 3.1e-34 149.1 98 78.6
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.0e-34 148.7 98 78.6
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 6.9e-34 147.9 92 84.8
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 8.9e-34 147.5 104 75.0
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 8.9e-34 147.5 104 70.2
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.2e-33 147.1 106 74.5
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.2e-33 147.1 98 78.6
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 1.5e-33 146.7 104 72.1
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 3.4e-33 145.6 104 71.2
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 4.4e-33 145.2 104 76.0
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 7.6e-33 144.4 98 75.5
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 1.3e-32 143.7 104 72.1
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.7e-32 143.3 98 71.4
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 2.2e-32 142.9 104 73.1
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 2.2e-32 142.9 105 75.2
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 4.9e-32 141.7 107 67.3
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 6.4e-32 141.4 104 70.2
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 8.4e-32 141.0 107 66.4
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 3.2e-31 139.0 98 73.5
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 4.2e-31 138.7 104 70.2
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.2e-30 137.1 100 74.0
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.2e-30 137.1 88 80.7
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.6e-30 136.7 104 66.3
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 2.1e-30 136.3 104 67.3
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 2.7e-30 136.0 98 69.4
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 4.6e-30 135.2 104 71.2
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 4.6e-30 135.2 105 73.3
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 7.8e-30 134.4 104 66.3
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 7.8e-30 134.4 104 64.4
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.0e-29 134.0 104 64.4
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 3.0e-29 132.5 104 70.2
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 3.9e-29 132.1 94 74.5
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.9e-28 129.8 104 62.5
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 3.3e-28 129.0 96 75.0
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 7.3e-28 127.9 115 60.9
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 7.3e-28 127.9 98 71.4
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 3.6e-27 125.6 147 52.4
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 4.8e-27 125.2 96 66.7
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 2.4e-26 122.9 92 72.8
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 2.4e-26 122.9 92 72.8
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 3.1e-26 122.5 92 72.8
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 3.1e-26 122.5 92 72.8
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.2e-25 120.6 66 95.5
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.2e-25 120.6 79 79.7
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 3.4e-25 119.0 92 71.7
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.6e-25 117.9 72 81.9
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.7e-24 116.7 93 69.9
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 7.1e-23 111.3 107 52.3
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 9.3e-23 110.9 107 51.4
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 7.9e-22 107.8 155 47.1
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 3.3e-20 102.4 62 82.3
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 4.3e-20 102.1 63 76.2
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 9.6e-20 100.9 62 82.3
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 2.1e-19 99.8 73 74.0
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 2.1e-19 99.8 74 68.9
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.8e-18 96.7 79 60.8
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 2.4e-18 96.3 62 77.4
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.3e-16 90.5 62 72.6
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 1.0e-13 80.9 96 44.8
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 6.2e-11 71.6 78 43.6
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 8.1e-11 71.2 41 82.9
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 2.2e-08 63.2 61 49.2
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 2.2e-08 63.2 104 31.7


User provided reference genes

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