Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia02464 Actinidia chinensis HOM05D000182 ORTHO05D058213 5.6e-47 191.0 130 100.0
QL07p037889 Quercus lobata HOM05D000182 ORTHO05D000112 4.3e-07 58.5 87 40.2
CiPaw.10G014300 Carya illinoinensis HOM05D000182 ORTHO05D000112 7.3e-07 57.8 98 33.7
GSVIVG01033911001 Vitis vinifera HOM05D000182 ORTHO05D000112 7.3e-07 57.8 88 40.9
MSTRG.5876 Avicennia marina HOM05D000182 ORTHO05D000112 9.6e-07 57.4 99 35.4
MELO3C009508.2 Cucumis melo HOM05D000182 ORTHO05D000112 1.6e-06 56.6 89 38.2
QL07p037934 Quercus lobata HOM05D000182 ORTHO05D000112 1.6e-06 56.6 88 36.4
Manes.08G029700 Manihot esculenta HOM05D000182 ORTHO05D000112 2.1e-06 56.2 100 35.0
QL07p037929 Quercus lobata HOM05D000182 ORTHO05D000112 2.1e-06 56.2 90 36.7
COL.COLO4_29645 Corchorus olitorius HOM05D000182 ORTHO05D000112 2.8e-06 55.8 97 34.0
QL93p1999_0109 Quercus lobata HOM05D000182 ORTHO05D000112 2.8e-06 55.8 87 36.8
TAR623G0062 Trochodendron aralioides HOM05D000182 ORTHO05D000112 2.8e-06 55.8 100 34.0
CsaV3_3G037640 Cucumis sativus L. HOM05D000182 ORTHO05D000112 3.6e-06 55.5 91 36.3
QL07p037865 Quercus lobata HOM05D000182 ORTHO05D000112 3.6e-06 55.5 93 34.4
Sed0005433 Sechium edule HOM05D000182 ORTHO05D000112 3.6e-06 55.5 87 35.6
Duzib093G1415 Durio zibethinus HOM05D000182 ORTHO05D000112 6.2e-06 54.7 96 34.4
Ciclev10012444m.g Citrus clementina HOM05D000182 ORTHO05D000112 8.1e-06 54.3 94 34.0
Glyma.03G113200 Glycine max HOM05D000182 ORTHO05D000112 8.1e-06 54.3 107 29.9
Thecc.05G097800 Theobroma cacao HOM05D000182 ORTHO05D000112 8.1e-06 54.3 96 34.4


User provided reference genes

Program Settings