Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia02445 Actinidia chinensis HOM05D005311 ORTHO05D006160 2.2e-120 435.6 225 100.0
Actinidia00352 Actinidia chinensis HOM05D005311 ORTHO05D006160 1.8e-109 399.4 225 92.0
Rhsim11G0150000 Rhododendron simsii HOM05D005311 ORTHO05D006160 2.2e-83 312.8 223 75.3
CSS0009611 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 8.9e-77 290.8 224 70.1
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 9.2e-74 280.8 215 68.8
TAR376G1236 Trochodendron aralioides HOM05D000442 ORTHO05D006160 7.3e-71 271.2 215 64.2
CiPaw.05G021200 Carya illinoinensis HOM05D005311 ORTHO05D006160 8.4e-67 257.7 224 63.4
GSVIVG01037044001 Vitis vinifera HOM05D005311 ORTHO05D006160 1.3e-64 250.4 224 62.5
TAR625G0307 Trochodendron aralioides HOM05D005311 ORTHO05D006160 3.0e-64 249.2 224 59.8
TAR628G1269 Trochodendron aralioides HOM05D005311 ORTHO05D006160 4.8e-62 241.9 224 57.6
Sopen01g049100 Solanum pennellii HOM05D005311 ORTHO05D006160 8.1e-62 241.1 226 58.8
Solyc01g106790.3 Solanum lycopersicum HOM05D005311 ORTHO05D006160 1.4e-61 240.4 226 58.4
PGSC0003DMG400025735 Solanum tuberosum HOM05D005311 ORTHO05D006160 2.4e-61 239.6 226 58.8
Atru.chr5.2262 Acer truncatum HOM05D005311 ORTHO05D006160 3.1e-61 239.2 196 62.8
Cc02_g20120 Coffea canephora HOM05D005311 ORTHO05D006160 9.0e-61 237.7 220 58.2
MSTRG.16668 Avicennia marina HOM05D005311 ORTHO05D006160 1.3e-59 233.8 225 58.7
Gohir.A12G018400 Gossypium hirsutum HOM05D005311 ORTHO05D006160 3.8e-59 232.3 224 58.9
Manes.07G056400 Manihot esculenta HOM05D005311 ORTHO05D006160 3.8e-59 232.3 224 55.8
COL.COLO4_32478 Corchorus olitorius HOM05D005311 ORTHO05D006160 4.9e-59 231.9 225 58.2
Gohir.D12G019000 Gossypium hirsutum HOM05D005311 ORTHO05D006160 6.4e-59 231.5 224 58.0
QL11p029204 Quercus lobata HOM05D005311 ORTHO05D006160 6.4e-59 231.5 240 55.8
SalBow6G1857 Salvia bowleyana HOM05D005311 ORTHO05D006160 6.4e-59 231.5 223 57.0
Gorai.008G019300 Gossypium raimondii HOM05D005311 ORTHO05D006160 1.9e-58 229.9 224 57.6
SGA_v2.0_scaffold32G12981 Striga asiatica HOM05D005311 ORTHO05D006160 1.9e-58 229.9 223 57.0
MD05G1106900 Malus domestica HOM05D005311 ORTHO05D006160 2.4e-58 229.6 223 55.6
Ciclev10029272m.g Citrus clementina HOM05D005311 ORTHO05D006160 4.2e-58 228.8 175 65.7
CANSAT25G3378 Cannabis sativa HOM05D005311 ORTHO05D006160 1.2e-57 227.3 224 57.1
Aqoxy5G01939 Aquilegia oxysepala HOM05D005311 ORTHO05D006160 3.5e-57 225.7 211 57.8
Migut.B00474 Erythranthe guttata HOM05D005311 ORTHO05D006160 3.5e-57 225.7 223 55.2
Duzib052G0370 Durio zibethinus HOM05D005311 ORTHO05D006160 1.0e-56 224.2 225 58.2
Nn6g32054 Nelumbo nucifera HOM05D005311 ORTHO05D006160 2.3e-56 223.0 152 75.0
Thecc.02G120600 Theobroma cacao HOM05D005311 ORTHO05D006160 2.3e-56 223.0 224 55.8
Gohir.A03G180600 Gossypium hirsutum HOM05D005311 ORTHO05D006160 3.9e-56 222.2 224 56.2
Gohir.D02G203104 Gossypium hirsutum HOM05D005311 ORTHO05D006160 6.6e-56 221.5 224 56.2
CAN.G606.76 Capsicum annuum HOM05D005311 ORTHO05D006160 1.1e-55 220.7 227 55.1
Lsat_1_v5_gn_9_113920 Lactuca sativa HOM05D005311 ORTHO05D006160 2.5e-55 219.5 224 55.8
TWI14G0308 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 2.5e-55 219.5 230 57.4
Nitab4.5_0009103g0020 Nicotiana tabacum HOM05D005311 ORTHO05D006160 3.3e-55 219.2 225 57.3
TWI59G0049 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 3.3e-55 219.2 222 55.9
FvH4_2g03130 Fragaria vesca HOM05D005311 ORTHO05D006160 5.6e-55 218.4 224 54.9
Lalb_Chr21g0307981 Lupinus albus HOM05D005311 ORTHO05D006160 5.6e-55 218.4 222 56.3
Gorai.005G229500 Gossypium raimondii HOM05D005311 ORTHO05D006160 1.6e-54 216.9 224 55.4
Potri.009G084800 Populus trichocarpa HOM05D005311 ORTHO05D006160 2.1e-54 216.5 229 55.0
Nitab4.5_0000772g0050 Nicotiana tabacum HOM05D005311 ORTHO05D006160 6.2e-54 214.9 225 56.4
arahy.Tifrunner.gnm1.ann1.KVB0K0 Arachis hypogaea HOM05D005311 ORTHO05D006160 8.1e-54 214.5 235 54.5
ECA240G0703 Erigeron canadensis HOM05D005311 ORTHO05D006160 1.1e-53 214.2 225 55.1
Cpa.g.sc106.28 Carica papaya HOM05D005311 ORTHO05D006160 1.4e-53 213.8 275 47.3
THA.LOC104815219 Tarenaya hassleriana HOM05D005311 ORTHO05D006160 1.4e-53 213.8 224 55.8
MD10G1111900 Malus domestica HOM05D005311 ORTHO05D006160 5.3e-53 211.8 225 54.2
FAN24G0492 Fragaria x ananassa HOM05D005311 ORTHO05D006160 9.0e-53 211.1 228 53.5
vmacro01940 Vaccinium macrocarpon HOM05D000211 ORTHO05D002517 9.0e-53 211.1 178 66.3
Peaxi162Scf00016g03127 Petunia axillaris HOM05D005311 ORTHO05D006160 1.5e-52 210.3 221 55.2
FAN27G0024 Fragaria x ananassa HOM05D005311 ORTHO05D006160 2.0e-52 209.9 228 53.1
HanXRQChr15g0495651 Helianthus annuus HOM05D005311 ORTHO05D006160 3.4e-52 209.1 225 53.8
Medtr1g105970 Medicago truncatula HOM05D005311 ORTHO05D006160 3.4e-52 209.1 187 59.4
Lalb_Chr02g0144871 Lupinus albus HOM05D005311 ORTHO05D006160 4.5e-52 208.8 224 53.6
Sed0009957 Sechium edule HOM05D005311 ORTHO05D006160 7.6e-52 208.0 225 53.8
FAN20G1889 Fragaria x ananassa HOM05D005311 ORTHO05D006160 1.7e-51 206.8 228 53.1
Eucgr.I02500 Eucalyptus grandis HOM05D005311 ORTHO05D006160 2.2e-51 206.5 226 56.2
Glyma.10G255200 Glycine max HOM05D005311 ORTHO05D006160 2.9e-51 206.1 223 54.3
Phvul.007G047500 Phaseolus vulgaris HOM05D005311 ORTHO05D006160 2.9e-51 206.1 226 53.5
ATR0767G087 Amborella trichopoda HOM05D005311 ORTHO05D006160 3.8e-51 205.7 222 55.9
FAN15G1540 Fragaria x ananassa HOM05D005311 ORTHO05D006160 3.8e-51 205.7 222 54.1
Ah.01g024570 Amaranthus hybridus HOM05D005311 ORTHO05D006160 8.4e-51 204.5 226 54.0
Lj9A337G44 Lonicera japonica HOM05D005311 ORTHO05D006160 1.4e-50 203.8 172 61.0
Potri.001G289400 Populus trichocarpa HOM05D005311 ORTHO05D006160 1.4e-50 203.8 220 53.2
Lsat_1_v5_gn_7_84560 Lactuca sativa HOM05D005311 ORTHO05D006160 2.4e-50 203.0 225 51.6
Lj5g0014269 Lotus japonicus HOM05D005311 ORTHO05D006160 2.4e-50 203.0 172 61.0
arahy.Tifrunner.gnm1.ann1.QK2693 Arachis hypogaea HOM05D005311 ORTHO05D006160 3.2e-50 202.6 157 66.2
Hund00418 Selenicereus undatus HOM05D005311 ORTHO05D006160 5.5e-50 201.8 220 54.1
RcHm_v2.0_Chr6g0248001 Rosa chinensis HOM05D005311 ORTHO05D006160 6.0e-49 198.4 258 47.7
Sc18g0007330 Simmondsia chinensis HOM05D005311 ORTHO05D006160 6.0e-49 198.4 223 52.0
MELO3C018026.2 Cucumis melo HOM05D005311 ORTHO05D006160 7.9e-49 198.0 223 52.5
DCAR_021939 Daucus carota HOM05D005311 ORTHO05D006160 1.3e-48 197.2 151 68.9
Thhalv10011774m.g Eutrema salsugineum HOM05D005311 ORTHO05D006160 2.3e-48 196.4 222 51.4
Ca_11020_v3 Cicer arietinum L. HOM05D005311 ORTHO05D006160 3.0e-48 196.1 194 57.2
PSO210G6612 Papaver somniferum HOM05D005311 ORTHO05D006160 1.1e-47 194.1 222 54.5
ECA236G2995 Erigeron canadensis HOM05D000211 ORTHO05D002517 1.5e-47 193.7 169 60.4
AUR62030871 Chenopodium quinoa HOM05D005311 ORTHO05D006160 1.9e-47 193.4 224 53.1
AUR62027028 Chenopodium quinoa HOM05D005311 ORTHO05D006160 2.5e-47 193.0 222 52.7
Lalb_Chr16g0376301 Lupinus albus HOM05D005311 ORTHO05D006160 2.5e-47 193.0 181 58.6
VMungo0720G0066 Vigna mungo HOM05D005311 ORTHO05D006160 2.5e-47 193.0 152 65.1
AT1G50020 Arabidopsis thaliana HOM05D005311 ORTHO05D006160 9.6e-47 191.0 213 50.7
ClCG10G010010 Citrullus lanatus HOM05D005311 ORTHO05D006160 9.6e-47 191.0 154 64.3
Glyma.20G136100 Glycine max HOM05D005311 ORTHO05D006160 9.6e-47 191.0 223 52.0
Sp1g36880 Schrenkiella parvula HOM05D005311 ORTHO05D006160 1.3e-46 190.7 222 50.0
AL1G57590 Arabidopsis lyrata HOM05D005311 ORTHO05D006160 2.1e-46 189.9 165 58.8
Carub.0001s3920 Capsella rubella HOM05D005311 ORTHO05D006160 4.8e-46 188.7 168 57.7
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 4.8e-46 188.7 152 61.2
Prupe.8G151000 Prunus persica HOM05D005311 ORTHO05D006160 6.9e-45 184.9 185 58.4
A08p03390 Brassica napus HOM05D005311 ORTHO05D006160 1.2e-44 184.1 226 51.3
PSO447G0012 Papaver somniferum HOM05D005311 ORTHO05D006160 1.5e-44 183.7 222 52.7
CARHR040130 Cardamine hirsuta HOM05D005311 ORTHO05D006160 2.0e-44 183.3 168 57.7
BolC3t21257H Brassica oleracea HOM05D005311 ORTHO05D006160 7.6e-44 181.4 227 49.8
Oeu037294.1 Olea europaea HOM05D005311 ORTHO05D006160 7.6e-44 181.4 142 65.5
BraA08t32371Z Brassica rapa HOM05D005311 ORTHO05D006160 1.7e-43 180.3 226 50.0
C03p89430 Brassica napus HOM05D005311 ORTHO05D006160 2.2e-43 179.9 220 50.5
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 4.9e-43 178.7 192 53.6
BcaB07g33454 Brassica carinata HOM05D005311 ORTHO05D006160 1.1e-42 177.6 158 61.4
A06p03410 Brassica napus HOM05D005311 ORTHO05D006160 4.2e-42 175.6 158 60.8
C06p04800 Brassica napus HOM05D005311 ORTHO05D006160 4.2e-42 175.6 158 59.5
BraA06t23549Z Brassica rapa HOM05D005311 ORTHO05D006160 4.2e-42 175.6 158 60.8
CsaV3_4G000050 Cucumis sativus L. HOM05D005311 ORTHO05D006160 7.1e-42 174.9 151 60.3
BcaC08g43180 Brassica carinata HOM05D005311 ORTHO05D006160 1.6e-41 173.7 158 58.9
BolC6t35609H Brassica oleracea HOM05D005311 ORTHO05D006160 1.6e-41 173.7 158 58.9
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 2.1e-41 173.3 154 58.4
Dinv09534 Davidia involucrata HOM05D000211 ORTHO05D002517 2.1e-41 173.3 186 54.3
HanXRQChr03g0073011 Helianthus annuus HOM05D005311 ORTHO05D006160 2.1e-41 173.3 226 51.3
Lj5A221T62 Lonicera japonica HOM05D005311 ORTHO05D006160 2.1e-41 173.3 143 62.2
unitig_61.g26039 Utricularia gibba HOM05D005311 ORTHO05D006160 3.9e-40 169.1 218 49.1
GSVIVG01009264001 Vitis vinifera HOM05D005311 ORTHO05D006160 3.9e-40 169.1 160 55.0
Zm00001eb201730 Zea mays HOM05D005311 ORTHO05D006160 1.4e-37 160.6 165 56.4
CSS0025480 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 9.0e-37 157.9 154 63.0
Duzib132G0391 Durio zibethinus HOM05D005311 ORTHO05D006160 1.2e-36 157.5 224 45.5
BcaB04g17278 Brassica carinata HOM05D005311 ORTHO05D006160 7.6e-36 154.8 136 61.0
Psat6g210680 Pisum sativum HOM05D005311 ORTHO05D006160 1.0e-35 154.5 128 65.6
Sabra09G0065400 Salix brachista HOM05D000308 ORTHO05D002517 1.3e-35 154.1 111 73.0
TPR.G21150 Trifolium pratense HOM05D005311 ORTHO05D006160 1.4e-34 150.6 143 60.1
Os11g0549900 Oryza sativa ssp. japonica HOM05D005311 ORTHO05D006160 2.5e-34 149.8 154 54.5
unitig_60.g25463 Utricularia gibba HOM05D005311 ORTHO05D006160 2.7e-33 146.4 149 56.4
EL10Ac9g22172 Beta vulgaris HOM05D005311 ORTHO05D006160 2.3e-32 143.3 187 51.3
arahy.Tifrunner.gnm1.ann1.YXS8EF Arachis hypogaea HOM05D005311 ORTHO05D006160 7.4e-31 138.3 143 53.8
TAR365G0893 Trochodendron aralioides HOM05D005311 ORTHO05D006160 1.3e-30 137.5 170 50.6
Oeu025305.1 Olea europaea HOM05D005311 ORTHO05D006160 6.9e-29 131.7 115 63.5
SMO118G0105 Selaginella moellendorffii HOM05D005311 ORTHO05D006160 1.3e-27 127.5 185 42.2
vmacro22259 Vaccinium macrocarpon HOM05D005311 ORTHO05D006160 3.8e-27 125.9 147 53.7
PGR142G3492 Punica granatum HOM05D005311 ORTHO05D006160 6.5e-27 125.2 169 44.4
Oeu037691.1 Olea europaea HOM05D005311 ORTHO05D006160 1.4e-26 124.0 95 70.5
Dinv16067 Davidia involucrata HOM05D005311 ORTHO05D006160 1.9e-26 123.6 131 53.4
Pp3c9_20640 Physcomitrium patens HOM05D005311 ORTHO05D006160 9.4e-26 121.3 153 48.4
CDE04G0288 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 1.6e-25 120.6 87 67.8
SGA_v2.0_scaffold225G43064 Striga asiatica HOM05D005311 ORTHO05D006160 1.8e-24 117.1 150 50.7
Mapoly0159s0003 Marchantia polymorpha HOM05D005311 ORTHO05D006160 4.8e-22 109.0 166 43.4
Haze_10287 Corylus avellana HOM05D005311 ORTHO05D006160 5.3e-21 105.5 86 65.1
Rhsim05G0093200 Rhododendron simsii HOM05D005311 ORTHO05D006160 5.3e-21 105.5 192 40.6
AagrBONN_evm.TU.Sc2ySwM_340.346 Anthoceros agrestis HOM05D005311 ORTHO05D006160 5.9e-20 102.1 162 42.0
Cfa004693 Carpinus fangiana HOM05D005311 ORTHO05D006160 7.7e-20 101.7 78 70.5
arahy.Tifrunner.gnm1.ann1.YSC4AN Arachis hypogaea HOM05D005311 ORTHO05D006160 1.7e-19 100.5 138 41.3
CDE02G0336 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 1.1e-18 97.8 155 43.2
Dinv44912 Davidia involucrata HOM05D005311 ORTHO05D006160 1.1e-18 97.8 135 44.4
arahy.Tifrunner.gnm1.ann1.6ZTX4G Arachis hypogaea HOM05D005311 ORTHO05D006160 2.5e-18 96.7 147 39.5
HPP92_006035 Vanilla planifolia HOM05D005311 ORTHO05D006160 1.4e-13 80.9 103 51.5
Cre14.g614000 Chlamydomonas reinhardtii HOM05D005311 ORTHO05D006160 1.2e-12 77.8 88 48.9
CARHR113150 Cardamine hirsuta HOM05D005311 ORTHO05D006160 8.5e-11 71.6 51 68.6
CBR_g12748 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-10 71.2 76 51.3
arahy.Tifrunner.gnm1.ann1.HG6PX3 Arachis hypogaea HOM05D005311 ORTHO05D006160 4.2e-10 69.3 136 34.6
arahy.Tifrunner.gnm1.ann1.TC5M0Q Arachis hypogaea HOM05D005311 ORTHO05D006160 4.2e-10 69.3 130 33.8
SEGI_31449 Sequoiadendron giganteum HOM05D005311 ORTHO05D006160 8.8e-08 61.6 104 48.1


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