Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 1.6e-83 312.8 160 100.0
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 5.4e-60 234.6 160 73.8
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 3.3e-57 225.3 160 70.0
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 1.9e-52 209.5 160 67.5
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 1.0e-50 203.8 160 61.9
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 1.7e-50 203.0 161 65.8
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 3.3e-49 198.7 160 65.0
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 3.3e-49 198.7 161 60.9
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 1.6e-48 196.4 160 63.1
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 6.2e-48 194.5 160 63.1
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 2.0e-46 189.5 161 61.5
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 3.4e-46 188.7 160 61.9
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 1.3e-45 186.8 160 55.6
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 2.9e-45 185.7 160 57.5
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 4.9e-45 184.9 160 55.6
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 6.4e-45 184.5 160 57.5
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 4.2e-44 181.8 160 59.4
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 2.1e-43 179.5 162 58.6
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 2.7e-43 179.1 160 57.5
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 2.7e-43 179.1 160 56.2
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 2.7e-43 179.1 184 52.7
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 4.6e-43 178.3 161 56.5
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 7.8e-43 177.6 160 56.9
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 1.7e-42 176.4 160 53.1
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 8.7e-42 174.1 160 57.5
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 1.6e-40 169.9 162 53.1
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 3.6e-40 168.7 160 53.1
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 6.2e-40 167.9 143 55.2
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.4e-39 166.0 165 53.9
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 5.3e-39 164.9 163 53.4
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 9.0e-39 164.1 160 53.1
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 1.5e-38 163.3 150 54.7
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 2.6e-38 162.5 142 59.2
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 9.9e-38 160.6 188 49.5
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 3.8e-37 158.7 163 54.6
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 6.4e-37 157.9 160 53.1
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.4e-36 156.8 163 52.1
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 1.9e-36 156.4 165 50.9
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 2.4e-36 156.0 163 50.9
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.4e-36 156.0 163 53.4
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 2.4e-36 156.0 142 54.2
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 9.3e-36 154.1 186 47.3
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 9.3e-36 154.1 161 52.2
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 1.2e-35 153.7 161 52.8
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 1.2e-35 153.7 161 52.8
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 1.6e-35 153.3 163 49.1
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 3.5e-35 152.1 163 49.7
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 3.5e-35 152.1 187 46.5
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 6.0e-35 151.4 163 47.9
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 6.0e-35 151.4 161 52.8
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 7.8e-35 151.0 166 48.2
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 7.8e-35 151.0 163 49.1
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 7.8e-35 151.0 161 49.7
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.7e-34 149.8 187 46.5
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 2.3e-34 149.4 163 48.5
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 3.9e-34 148.7 215 43.3
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 5.1e-34 148.3 163 47.9
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 1.1e-33 147.1 163 47.2
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 1.1e-33 147.1 163 47.2
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 1.1e-33 147.1 164 45.7
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 2.5e-33 146.0 160 50.6
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 7.3e-33 144.4 163 48.5
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 9.6e-33 144.1 165 49.1
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 9.6e-33 144.1 160 48.1
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 1.6e-32 143.3 167 47.9
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 1.6e-32 143.3 163 49.1
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 2.1e-32 142.9 163 46.0
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 2.1e-32 142.9 163 46.0
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 2.1e-32 142.9 163 46.0
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 3.6e-32 142.1 107 64.5
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 8.1e-32 141.0 147 52.4
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 1.1e-31 140.6 175 47.4
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 1.4e-31 140.2 163 46.6
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 2.4e-31 139.4 166 48.2
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 6.9e-31 137.9 141 48.9
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 1.2e-30 137.1 106 65.1
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 2.4e-28 129.4 161 47.2
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 7.1e-28 127.9 161 46.6
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 2.7e-27 125.9 161 46.6
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 2.7e-27 125.9 164 45.1
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 5.6e-25 118.2 160 39.4
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 5.3e-23 111.7 83 62.7
FAN09G2471 Fragaria x ananassa HOM05D007488 ORTHO05D009461 2.6e-22 109.4 156 41.7
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 2.6e-22 109.4 138 42.8
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.3e-21 107.1 297 29.0
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 1.1e-20 104.0 83 61.4
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 1.4e-20 103.6 161 40.4
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 2.5e-20 102.8 162 38.3
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 2.1e-19 99.8 84 56.0
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 8.7e-18 94.4 164 37.8
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 4.3e-17 92.0 96 51.0
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 9.6e-17 90.9 176 37.5
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 4.0e-15 85.5 79 54.4
Zm00001eb347080 Zea mays HOM05D007488 ORTHO05D009461 5.3e-15 85.1 161 36.0
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 3.8e-13 79.0 98 46.9
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 3.8e-13 79.0 98 46.9
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 8.4e-13 77.8 66 57.6
Os01g0955600 Oryza sativa ssp. japonica HOM05D007488 ORTHO05D009461 7.4e-09 64.7 101 41.6
MBI13_g11934_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 1.3e-08 63.9 76 42.1
ATR0057G037 Amborella trichopoda HOM05D007488 ORTHO05D009461 5.3e-07 58.5 166 23.5
unitig_21.g20692 Utricularia gibba HOM05D007488 ORTHO05D009461 6.9e-07 58.2 76 40.8


User provided reference genes

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