Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia01802 Actinidia chinensis HOM05D024403 ORTHO05D007321 2.5e-108 396.0 285 100.0
CSS0031442 Camellia sinensis var. sinensis HOM05D001603 ORTHO05D001393 3.4e-12 76.6 75 46.7
BraSC143t45651Z Brassica rapa HOM05D004182 ORTHO05D007321 6.3e-11 72.4 44 70.5
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 8.3e-11 72.0 74 48.6
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 1.6e-09 67.8 44 68.2
Aqoxy3G03256 Aquilegia oxysepala HOM05D020091 ORTHO05D009596 2.0e-09 67.4 74 36.5
VMungo1080G1108 Vigna mungo HOM05D004182 ORTHO05D007321 1.0e-08 65.1 46 63.0
EL10As15g24133 Beta vulgaris HOM05D004182 ORTHO05D007321 2.9e-08 63.5 40 67.5
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 5.0e-08 62.8 40 67.5
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.5e-08 62.4 38 71.1
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 1.1e-07 61.6 38 68.4
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BolSC35t60712H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BraSC103t45421Z Brassica rapa HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BraSC58t46465Z Brassica rapa HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 1.1e-07 61.6 38 68.4
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 1.1e-07 61.6 39 66.7
SEGI_13516 Sequoiadendron giganteum HOM05D004182 ORTHO05D007321 3.2e-07 60.1 38 68.4
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 3.2e-07 60.1 40 62.5
THA.LOC104807891 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 4.2e-07 59.7 71 40.8
Sp1g35035 Schrenkiella parvula HOM05D001603 ORTHO05D001393 5.5e-07 59.3 74 36.5
BraSC59t46543Z Brassica rapa HOM05D004182 ORTHO05D007321 1.2e-06 58.2 36 69.4
DCAR_013301 Daucus carota HOM05D024403 ORTHO05D045080 1.6e-06 57.8 79 34.2
BcaC01g06102 Brassica carinata HOM05D001603 ORTHO05D001393 2.1e-06 57.4 73 35.6
BcaC01g06105 Brassica carinata HOM05D001603 ORTHO05D001393 2.1e-06 57.4 73 35.6
Peaxi162Scf00001g00029 Petunia axillaris HOM05D010902 ORTHO05D013276 2.1e-06 57.4 72 30.6
DCAR_013300 Daucus carota HOM05D024403 ORTHO05D045080 3.6e-06 56.6 66 34.8
RcHm_v2.0_Chr1g0323971 Rosa chinensis HOM05D001603 ORTHO05D001393 3.6e-06 56.6 72 38.9
Thhalv10005396m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 4.7e-06 56.2 75 40.0
MD17G1163700 Malus domestica HOM05D001603 ORTHO05D001393 6.1e-06 55.8 78 33.3
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 6.1e-06 55.8 35 68.6
Sc09g0006250 Simmondsia chinensis HOM05D002578 ORTHO05D005154 6.1e-06 55.8 49 51.0


User provided reference genes

Program Settings