Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia00599 Actinidia chinensis HOM05D001991 ORTHO05D002030 4.7e-79 297.7 145 100.0
Actinidia20489 Actinidia chinensis HOM05D001991 ORTHO05D002030 5.5e-19 98.2 60 88.3
CSS0034955 Camellia sinensis var. sinensis HOM05D001991 ORTHO05D002030 3.8e-12 75.5 59 66.1
vmacro02254 Vaccinium macrocarpon HOM05D001991 ORTHO05D002030 1.4e-09 67.0 61 62.3
CSS0044440 Camellia sinensis var. sinensis HOM05D001991 ORTHO05D002030 2.3e-09 66.2 64 59.4
Sabra09G0099600 Salix brachista HOM05D001991 ORTHO05D002030 3.9e-09 65.5 70 55.7
Sabra09G0100900 Salix brachista HOM05D001991 ORTHO05D002030 3.9e-09 65.5 70 55.7
Glyma.12G030200 Glycine max HOM05D001991 ORTHO05D002030 6.7e-09 64.7 69 52.2
Lj5P183T88 Lonicera japonica HOM05D001991 ORTHO05D002030 1.5e-08 63.5 81 46.9
Oeu042186.2 Olea europaea HOM05D001991 ORTHO05D002030 1.5e-08 63.5 60 60.0
Potri.009G130200 Populus trichocarpa HOM05D001991 ORTHO05D002030 1.5e-08 63.5 70 54.3
MSTRG.16883 Avicennia marina HOM05D001991 ORTHO05D002030 2.0e-08 63.2 71 54.9
Cc02_g16460 Coffea canephora HOM05D001991 ORTHO05D002030 2.5e-08 62.8 69 52.2
Sabra04G0113400 Salix brachista HOM05D001991 ORTHO05D002030 3.3e-08 62.4 69 55.1
Migut.B00116 Erythranthe guttata HOM05D001991 ORTHO05D002030 4.3e-08 62.0 59 59.3
Glyma.11G105400 Glycine max HOM05D001991 ORTHO05D002030 7.4e-08 61.2 65 50.8
Dinv41971 Davidia involucrata HOM05D001991 ORTHO05D002030 9.7e-08 60.8 60 56.7
Medtr4g074040 Medicago truncatula HOM05D001991 ORTHO05D002030 9.7e-08 60.8 69 52.2
COL.COLO4_17265 Corchorus olitorius HOM05D001991 ORTHO05D002030 1.3e-07 60.5 69 49.3
SGA_v2.0_scaffold58G20423 Striga asiatica HOM05D001375 ORTHO05D001222 1.3e-07 60.5 60 60.0
Oeu060420.1 Olea europaea HOM05D001991 ORTHO05D002030 1.7e-07 60.1 73 49.3
Hund06409 Selenicereus undatus HOM05D001991 ORTHO05D002030 2.2e-07 59.7 69 49.3
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 3.7e-07 58.9 66 54.5
Cpa.g.sc37.183 Carica papaya HOM05D001991 ORTHO05D002030 4.8e-07 58.5 85 43.5
arahy.Tifrunner.gnm1.ann1.CXE5JY Arachis hypogaea HOM05D001991 ORTHO05D002030 6.3e-07 58.2 69 53.6
Ca_03054_v3 Cicer arietinum L. HOM05D001991 ORTHO05D002030 6.3e-07 58.2 69 50.7
Ciclev10028634m.g Citrus clementina HOM05D001991 ORTHO05D002030 8.2e-07 57.8 60 53.3
Rhsim11G0188300 Rhododendron simsii HOM05D001991 ORTHO05D002030 1.4e-06 57.0 61 55.7
RcHm_v2.0_Chr6g0244781 Rosa chinensis HOM05D001991 ORTHO05D002030 1.4e-06 57.0 123 38.2
AL7G10600 Arabidopsis lyrata HOM05D001991 ORTHO05D002030 1.8e-06 56.6 60 50.0
arahy.Tifrunner.gnm1.ann1.H3HBDV Arachis hypogaea HOM05D001991 ORTHO05D002030 1.8e-06 56.6 69 52.2
AT4G38710 Arabidopsis thaliana HOM05D001991 ORTHO05D002030 2.4e-06 56.2 83 39.8
ClCG02G011610 Citrullus lanatus HOM05D001991 ORTHO05D002030 2.4e-06 56.2 69 49.3
MELO3C020790.2 Cucumis melo HOM05D001991 ORTHO05D002030 3.1e-06 55.8 69 49.3
Aa31LG6G16470 Aethionema arabicum HOM05D001991 ORTHO05D002030 4.1e-06 55.5 83 42.2
CARHR294420 Cardamine hirsuta HOM05D001991 ORTHO05D002030 4.1e-06 55.5 83 44.6
FvH4_2g01750 Fragaria vesca HOM05D001991 ORTHO05D002030 4.1e-06 55.5 132 36.4
FAN24G0537 Fragaria x ananassa HOM05D001991 ORTHO05D002030 4.1e-06 55.5 132 36.4
Nitab4.5_0000283g0030 Nicotiana tabacum HOM05D001991 ORTHO05D002030 4.1e-06 55.5 63 54.0
Potri.004G169100 Populus trichocarpa HOM05D001991 ORTHO05D002030 4.1e-06 55.5 69 50.7
Sopen01g053250 Solanum pennellii HOM05D001991 ORTHO05D002030 4.1e-06 55.5 63 52.4
THA.LOC104804098 Tarenaya hassleriana HOM05D001991 ORTHO05D002030 4.1e-06 55.5 59 52.5
TPR.G19905 Trifolium pratense HOM05D001991 ORTHO05D002030 4.1e-06 55.5 69 49.3
MELO3C013373.2 Cucumis melo HOM05D001991 ORTHO05D002030 6.9e-06 54.7 39 61.5
Duzib248G0809 Durio zibethinus HOM05D001991 ORTHO05D002030 6.9e-06 54.7 75 46.7
VMungo1127G1801 Vigna mungo HOM05D001991 ORTHO05D002030 6.9e-06 54.7 69 47.8
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 9.1e-06 54.3 82 40.2
FAN15G2134 Fragaria x ananassa HOM05D001991 ORTHO05D002030 9.1e-06 54.3 64 48.4
FAN20G2078 Fragaria x ananassa HOM05D001991 ORTHO05D002030 9.1e-06 54.3 64 48.4
SalBow6G0737 Salvia bowleyana HOM05D001991 ORTHO05D002030 9.1e-06 54.3 70 44.3


User provided reference genes

Program Settings