Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 1.2e-183 646.4 333 100.0
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 8.0e-82 308.1 380 50.5
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 1.2e-48 198.0 115 89.6
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 1.2e-48 198.0 115 89.6
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 3.4e-48 196.4 115 89.6
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 2.2e-47 193.7 115 87.8
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 2.9e-47 193.4 115 88.7
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 2.9e-47 193.4 115 88.7
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 2.9e-47 193.4 115 88.7
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 4.9e-47 192.6 115 86.1
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 8.3e-47 191.8 115 86.1
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 8.3e-47 191.8 115 86.1
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 1.1e-46 191.4 115 86.1
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.1e-46 191.4 116 87.9
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.1e-46 191.4 116 87.9
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 1.4e-46 191.0 115 87.0
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 1.9e-46 190.7 115 83.5
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 5.4e-46 189.1 157 66.9
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 5.4e-46 189.1 115 86.1
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 7.1e-46 188.7 134 76.9
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 7.1e-46 188.7 119 81.5
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 9.2e-46 188.3 132 76.5
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 1.2e-45 188.0 115 83.5
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 1.6e-45 187.6 115 84.3
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 1.6e-45 187.6 119 81.5
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 2.1e-45 187.2 115 83.5
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 3.5e-45 186.4 115 85.2
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 3.5e-45 186.4 115 83.5
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.5e-45 186.4 115 83.5
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.5e-45 186.4 115 83.5
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 4.6e-45 186.0 115 83.5
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 6.0e-45 185.7 115 85.2
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 7.8e-45 185.3 115 85.2
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 7.8e-45 185.3 115 85.2
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 7.8e-45 185.3 115 85.2
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 7.8e-45 185.3 123 78.0
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 7.8e-45 185.3 136 73.5
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 7.8e-45 185.3 115 85.2
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 1.0e-44 184.9 115 82.6
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 1.3e-44 184.5 115 84.3
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 1.3e-44 184.5 154 66.2
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 1.7e-44 184.1 126 81.0
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 3.0e-44 183.3 115 81.7
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 3.0e-44 183.3 115 81.7
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 3.0e-44 183.3 115 80.9
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 3.0e-44 183.3 115 81.7
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 3.9e-44 183.0 115 82.6
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 3.9e-44 183.0 126 78.6
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 3.9e-44 183.0 115 81.7
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 5.1e-44 182.6 115 83.5
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 5.1e-44 182.6 115 83.5
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 6.6e-44 182.2 105 89.5
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 8.6e-44 181.8 115 83.5
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 8.6e-44 181.8 115 82.6
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 1.1e-43 181.4 115 83.5
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.1e-43 181.4 116 81.9
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.5e-43 181.0 115 81.7
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 1.5e-43 181.0 115 81.7
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 1.5e-43 181.0 119 78.2
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.9e-43 180.6 115 83.5
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.9e-43 180.6 115 83.5
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.9e-43 180.6 115 81.7
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 1.9e-43 180.6 115 80.9
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 2.5e-43 180.3 115 80.0
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 3.3e-43 179.9 115 80.9
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 4.3e-43 179.5 115 82.6
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 7.3e-43 178.7 115 82.6
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 7.3e-43 178.7 117 81.2
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 9.6e-43 178.3 118 78.8
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 1.6e-42 177.6 115 79.1
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 2.1e-42 177.2 115 80.9
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 2.1e-42 177.2 115 81.7
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.8e-42 176.8 109 85.3
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 8.1e-42 175.3 120 77.5
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.1e-41 174.9 120 77.5
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.1e-41 174.9 120 77.5
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 1.4e-41 174.5 115 78.3
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 3.1e-41 173.3 115 78.3
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 3.1e-41 173.3 115 77.4
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 4.0e-41 172.9 116 77.6
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 5.2e-41 172.6 121 77.7
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 5.2e-41 172.6 115 80.0
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 5.2e-41 172.6 115 78.3
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.8e-41 172.2 124 75.0
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.8e-41 172.2 124 75.0
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.2e-40 171.4 115 77.4
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 2.6e-40 170.2 116 81.0
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 9.9e-40 168.3 115 72.2
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 2.2e-39 167.2 117 78.6
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 1.1e-38 164.9 121 73.6
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 2.4e-38 163.7 117 75.2
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 5.4e-38 162.5 100 83.0
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 7.1e-38 162.2 126 70.6
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 1.6e-37 161.0 123 70.7
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 2.7e-37 160.2 123 70.7
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 4.6e-37 159.5 119 73.1
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 6.0e-37 159.1 122 69.7
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 1.0e-36 158.3 122 69.7
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 1.0e-36 158.3 120 71.7
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 1.3e-36 157.9 120 71.7
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 1.7e-36 157.5 115 71.3
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 3.0e-36 156.8 120 70.8
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 5.1e-36 156.0 115 72.2
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 8.7e-36 155.2 115 72.2
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 1.5e-35 154.5 124 68.5
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 1.5e-35 154.5 124 68.5
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.5e-35 154.5 115 72.2
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 2.5e-35 153.7 119 68.9
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 3.3e-35 153.3 115 71.3
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 1.6e-34 151.0 115 68.7
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 2.0e-32 144.1 116 67.2
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 3.4e-32 143.3 116 65.5
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 3.4e-32 143.3 122 63.1
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 7.1e-30 135.6 99 73.7
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 5.1e-28 129.4 120 61.7
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 5.6e-27 125.9 81 84.0
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 1.3e-26 124.8 98 68.4
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 1.1e-25 121.7 81 81.5
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 3.1e-25 120.2 115 64.3
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 6.9e-25 119.0 99 65.7
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 1.2e-24 118.2 115 59.1
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 3.4e-24 116.7 121 54.5
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 4.9e-23 112.8 120 51.7
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 4.9e-23 112.8 121 52.1
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 7.9e-21 105.5 73 74.0
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 7.9e-21 105.5 73 74.0
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 1.3e-20 104.8 79 63.3
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 1.8e-20 104.4 79 65.8
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 3.9e-20 103.2 78 67.9
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.5e-19 101.3 90 61.1
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 7.4e-19 99.0 71 69.0
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 7.4e-19 99.0 71 69.0
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 1.1e-17 95.1 71 67.6
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 5.3e-17 92.8 69 62.3
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 9.0e-17 92.0 69 66.7
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.2e-16 91.7 69 66.7
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.5e-16 91.3 69 65.2
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 4.9e-15 86.3 127 44.1
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 9.3e-14 82.0 62 69.4
Eucgr.I01257 Eucalyptus grandis HOM05D005136 ORTHO05D191236 1.2e-13 81.6 112 45.5
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 1.6e-13 81.3 115 41.7
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 4.6e-13 79.7 75 54.7
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 1.8e-12 77.8 72 55.6
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 2.5e-11 73.9 72 54.2
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 2.1e-10 70.9 70 50.0
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 3.7e-10 70.1 125 43.2
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 1.3e-07 61.6 51 64.7
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 2.2e-07 60.8 72 43.1
HPP92_014777 Vanilla planifolia HOM05D005136 ORTHO05D006619 4.2e-06 56.6 92 38.0


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