Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 2.9e-171 605.1 310 100.0
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 4.5e-55 219.2 155 67.7
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 2.1e-52 210.3 155 67.1
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 6.1e-52 208.8 163 63.2
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 3.0e-51 206.5 188 57.4
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 5.2e-51 205.7 188 56.9
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 5.2e-51 205.7 168 61.3
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 5.2e-51 205.7 188 54.3
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 6.8e-51 205.3 164 62.2
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 1.2e-50 204.5 155 64.5
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 1.2e-50 204.5 152 65.1
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 1.2e-50 204.5 185 56.2
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 2.0e-50 203.8 227 48.5
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 2.0e-50 203.8 234 49.6
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 2.0e-50 203.8 225 50.7
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 2.6e-50 203.4 187 57.2
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 2.6e-50 203.4 155 64.5
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 2.6e-50 203.4 170 61.2
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 4.4e-50 202.6 234 50.0
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 5.8e-50 202.2 152 64.5
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 7.5e-50 201.8 194 56.2
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 7.5e-50 201.8 186 56.5
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 7.5e-50 201.8 171 60.8
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 7.5e-50 201.8 171 60.8
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 9.8e-50 201.4 156 64.1
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 1.3e-49 201.1 214 49.1
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 1.7e-49 200.7 155 63.9
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 1.7e-49 200.7 155 63.2
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 2.2e-49 200.3 189 57.1
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 2.9e-49 199.9 168 58.9
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 3.7e-49 199.5 177 58.8
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 4.9e-49 199.1 171 60.2
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 4.9e-49 199.1 155 63.9
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 6.4e-49 198.7 155 63.2
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 6.4e-49 198.7 186 55.4
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 8.3e-49 198.4 157 62.4
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 8.3e-49 198.4 166 59.0
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 1.1e-48 198.0 172 61.6
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 1.1e-48 198.0 155 63.2
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 1.1e-48 198.0 155 63.2
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 1.4e-48 197.6 182 57.7
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 1.8e-48 197.2 155 63.9
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 1.8e-48 197.2 220 50.9
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 5.4e-48 195.7 162 60.5
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 7.0e-48 195.3 155 63.2
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 9.2e-48 194.9 155 62.6
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 1.2e-47 194.5 179 57.0
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.6e-47 194.1 166 57.2
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.6e-47 194.1 155 62.6
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 1.6e-47 194.1 154 63.0
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 2.7e-47 193.4 152 65.1
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 2.7e-47 193.4 155 61.3
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 4.6e-47 192.6 155 61.3
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 4.6e-47 192.6 166 56.6
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 4.6e-47 192.6 166 56.6
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 6.0e-47 192.2 162 58.0
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 1.3e-46 191.0 155 61.9
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 1.1e-45 188.0 209 51.7
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 1.1e-45 188.0 149 61.7
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.6e-44 184.1 155 58.1
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.6e-44 184.1 147 62.6
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 6.4e-41 172.2 162 58.0
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.2e-40 169.9 218 43.6
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 1.3e-30 137.9 101 64.4
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 2.4e-27 127.1 172 45.3
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 3.1e-27 126.7 81 77.8
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 3.2e-24 116.7 155 43.9
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 6.0e-23 112.5 141 38.3
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.1e-16 91.7 113 44.2
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.1e-15 87.4 167 33.5
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 2.4e-08 63.9 47 61.7
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 3.2e-08 63.5 49 59.2
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 4.2e-08 63.2 49 57.1
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 5.4e-08 62.8 40 72.5
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 5.4e-08 62.8 116 32.8
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 7.1e-08 62.4 47 61.7
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 2.1e-07 60.8 116 30.2
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 2.1e-07 60.8 119 31.1
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 6.0e-07 59.3 58 51.7
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 1.8e-06 57.8 48 60.4
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 3.9e-06 56.6 47 55.3
Cre10.g436850 Chlamydomonas reinhardtii HOM05D019817 ORTHO05D016515 6.7e-06 55.8 107 35.5


User provided reference genes

Program Settings