Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_344.4934 Anthoceros agrestis HOM05D022984 ORTHO05D023490 2.6e-124 448.7 230 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4935 Anthoceros agrestis HOM05D022984 ORTHO05D023490 1.1e-58 230.7 197 59.9
AagrBONN_evm.TU.Sc2ySwM_362.166 Anthoceros agrestis HOM05D022984 ORTHO05D023490 2.9e-54 216.1 194 58.2
AagrBONN_evm.TU.Sc2ySwM_344.4844 Anthoceros agrestis HOM05D022984 ORTHO05D023490 1.3e-19 100.9 203 31.0
AagrBONN_evm.TU.Sc2ySwM_228.1712 Anthoceros agrestis HOM05D022984 ORTHO05D023490 4.3e-10 69.3 133 32.3
SalBow6G0798 Salvia bowleyana HOM05D000180 ORTHO05D000099 2.4e-08 63.5 126 33.3
Eucgr.A01114 Eucalyptus grandis HOM05D000180 ORTHO05D000099 6.9e-08 62.0 168 26.8
SEGI_35627 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 5.8e-07 58.9 112 35.7
SGA_v2.0_scaffold302G47819 Striga asiatica HOM05D000180 ORTHO05D000099 5.8e-07 58.9 102 35.3
SGA_v2.0_scaffold58G20418 Striga asiatica HOM05D000180 ORTHO05D000099 5.8e-07 58.9 102 35.3
COL.COLO4_30590 Corchorus olitorius HOM05D000180 ORTHO05D000099 7.6e-07 58.5 129 31.8
Sed0005928 Sechium edule HOM05D000180 ORTHO05D000099 7.6e-07 58.5 165 30.3
Sed0020913 Sechium edule HOM05D000180 ORTHO05D000099 7.6e-07 58.5 131 29.8
SEGI_28266 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 7.6e-07 58.5 115 33.9
Lsat_1_v5_gn_1_15201 Lactuca sativa HOM05D000180 ORTHO05D000099 1.0e-06 58.2 108 36.1
AagrBONN_evm.TU.Sc2ySwM_228.5025 Anthoceros agrestis HOM05D000180 ORTHO05D000099 1.3e-06 57.8 146 30.1
HanXRQChr01g0024951 Helianthus annuus HOM05D000180 ORTHO05D000099 1.3e-06 57.8 103 31.1
FvH4_6g42930 Fragaria vesca HOM05D000180 ORTHO05D000099 1.7e-06 57.4 123 32.5
FvH4_7g31480 Fragaria vesca HOM05D000180 ORTHO05D000099 1.7e-06 57.4 120 30.8
FAN06G0338 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.7e-06 57.4 120 30.8
FAN06G1956 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.7e-06 57.4 120 30.8
FAN14G4538 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.7e-06 57.4 123 32.5
HanXRQChr01g0024961 Helianthus annuus HOM05D000180 ORTHO05D000099 1.7e-06 57.4 103 32.0
TWI79G0054 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 1.7e-06 57.4 105 35.2
SEGI_34023 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 2.9e-06 56.6 128 31.2
Ah.01g022720 Amaranthus hybridus HOM05D000180 ORTHO05D000099 3.8e-06 56.2 146 33.6
RcHm_v2.0_Chr2g0158911 Rosa chinensis HOM05D000180 ORTHO05D000099 3.8e-06 56.2 97 35.1
FAN05G0464 Fragaria x ananassa HOM05D000180 ORTHO05D000099 4.9e-06 55.8 123 32.5
Lsat_1_v5_gn_9_29500 Lactuca sativa HOM05D000180 ORTHO05D000099 4.9e-06 55.8 103 30.1
Lsat_1_v5_gn_9_29520 Lactuca sativa HOM05D000180 ORTHO05D000099 4.9e-06 55.8 103 30.1
AagrBONN_evm.TU.Sc2ySwM_228.5024 Anthoceros agrestis HOM05D000180 ORTHO05D000099 6.4e-06 55.5 143 27.3
BraA01t04146Z Brassica rapa HOM05D000180 ORTHO05D000099 6.4e-06 55.5 100 35.0
Eucgr.A01112 Eucalyptus grandis HOM05D000180 ORTHO05D000099 6.4e-06 55.5 98 39.8
Eucgr.A01115 Eucalyptus grandis HOM05D000180 ORTHO05D000099 6.4e-06 55.5 167 31.1
HanXRQChr02g0043641 Helianthus annuus HOM05D000180 ORTHO05D000099 6.4e-06 55.5 107 35.5
TWI60G0471 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 6.4e-06 55.5 96 40.6
TWI60G1599 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 6.4e-06 55.5 96 40.6
FvH4_6g42490 Fragaria vesca HOM05D000180 ORTHO05D000099 8.4e-06 55.1 97 37.1
FAN14G0740 Fragaria x ananassa HOM05D000180 ORTHO05D000099 8.4e-06 55.1 97 37.1
Lsat_1_v5_gn_1_60080 Lactuca sativa HOM05D000180 ORTHO05D000099 8.4e-06 55.1 103 36.9
Mapoly0009s0115 Marchantia polymorpha HOM05D000180 ORTHO05D000099 8.4e-06 55.1 97 36.1
Os11g0179500 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 8.4e-06 55.1 122 31.1


User provided reference genes

Program Settings