Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_344.4908 Anthoceros agrestis HOM05D006559 ORTHO05D008867 0.0e+00 1344.3 664 100.0
Mapoly0086s0053 Marchantia polymorpha HOM05D006559 ORTHO05D008867 1.1e-143 514.6 655 45.8
SEGI_33199 Sequoiadendron giganteum HOM05D006559 ORTHO05D008867 1.5e-132 477.6 669 41.9
Gohir.A09G234700 Gossypium hirsutum HOM05D006559 ORTHO05D008867 7.6e-124 448.7 664 39.0
vmacro08053 Vaccinium macrocarpon HOM05D006559 ORTHO05D008867 3.7e-123 446.4 659 38.8
Gohir.D09G235500 Gossypium hirsutum HOM05D006559 ORTHO05D008867 4.1e-122 443.0 664 38.9
Gorai.006G258500 Gossypium raimondii HOM05D006559 ORTHO05D008867 1.6e-121 441.0 664 38.7
Cpa.g.sc9.65 Carica papaya HOM05D006559 ORTHO05D008867 7.8e-121 438.7 640 40.0
Aqoxy2G02735 Aquilegia oxysepala HOM05D006559 ORTHO05D008867 2.8e-118 430.3 669 38.4
Hma1.2p1_0078F.1_g039970 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.4e-117 427.9 627 39.7
Dinv44291 Davidia involucrata HOM05D006559 ORTHO05D008867 2.6e-116 423.7 627 39.4
TWI73G0870 Tripterygium wilfordii HOM05D006559 ORTHO05D008867 3.4e-116 423.3 634 39.4
SGA_v2.0_scaffold18G08402 Striga asiatica HOM05D006559 ORTHO05D008867 5.8e-116 422.5 633 39.0
arahy.Tifrunner.gnm1.ann1.Y9UCUD Arachis hypogaea HOM05D006559 ORTHO05D008867 7.6e-116 422.2 649 38.8
Lalb_Chr07g0182081 Lupinus albus HOM05D006559 ORTHO05D008867 9.9e-116 421.8 624 38.6
RcHm_v2.0_Chr4g0424901 Rosa chinensis HOM05D006559 ORTHO05D008867 1.3e-115 421.4 674 38.7
GSVIVG01035001001 Vitis vinifera HOM05D006559 ORTHO05D008867 1.3e-115 421.4 661 39.0
CAN.G244.5 Capsicum annuum HOM05D006559 ORTHO05D008867 1.7e-115 421.0 660 39.1
Rhsim04G0235400 Rhododendron simsii HOM05D006559 ORTHO05D008867 1.7e-115 421.0 625 38.9
MBI18_g32021_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D008867 2.9e-115 420.2 665 38.5
THA.LOC104820440 Tarenaya hassleriana HOM05D006559 ORTHO05D008867 4.9e-115 419.5 653 36.3
Glyma.07G240200 Glycine max HOM05D006559 ORTHO05D008867 6.4e-115 419.1 653 37.7
Medtr4g122000 Medicago truncatula HOM05D006559 ORTHO05D008867 6.4e-115 419.1 660 38.8
Thecc.04G299700 Theobroma cacao HOM05D006559 ORTHO05D008867 6.4e-115 419.1 661 37.5
VMungo1215G0265 Vigna mungo HOM05D006559 ORTHO05D008867 1.1e-114 418.3 659 38.4
arahy.Tifrunner.gnm1.ann1.57X5SD Arachis hypogaea HOM05D006559 ORTHO05D008867 1.4e-114 417.9 649 38.7
CsaV3_3G015150 Cucumis sativus L. HOM05D006559 ORTHO05D008867 1.4e-114 417.9 663 38.0
Migut.G00055 Erythranthe guttata HOM05D006559 ORTHO05D008867 1.4e-114 417.9 655 38.8
Oeu032013.1 Olea europaea HOM05D006559 ORTHO05D008867 2.4e-114 417.2 649 38.7
Hund11970 Selenicereus undatus HOM05D006559 ORTHO05D008867 4.2e-114 416.4 634 37.9
MELO3C006713.2 Cucumis melo HOM05D006559 ORTHO05D008867 7.1e-114 415.6 672 37.9
Eucgr.H04041 Eucalyptus grandis HOM05D006559 ORTHO05D008867 9.3e-114 415.2 633 38.7
Lj4g0009670 Lotus japonicus HOM05D006559 ORTHO05D008867 2.7e-113 413.7 658 37.5
ATR0796G144 Amborella trichopoda HOM05D006559 ORTHO05D008867 3.5e-113 413.3 655 38.6
Peaxi162Scf00228g00226 Petunia axillaris HOM05D006559 ORTHO05D008867 1.0e-112 411.8 625 38.7
PGSC0003DMG400021843 Solanum tuberosum HOM05D006559 ORTHO05D008867 1.3e-112 411.4 651 37.0
AL3G30010 Arabidopsis lyrata HOM05D006559 ORTHO05D008867 1.7e-112 411.0 668 37.1
AT3G17030 Arabidopsis thaliana HOM05D006559 ORTHO05D008867 1.7e-112 411.0 665 37.3
Sopen01g026050 Solanum pennellii HOM05D006559 ORTHO05D008867 2.3e-112 410.6 662 37.0
Cc03_g00890 Coffea canephora HOM05D006559 ORTHO05D008867 3.0e-112 410.2 630 39.5
Manes.03G204300 Manihot esculenta HOM05D006559 ORTHO05D008867 3.0e-112 410.2 633 38.1
Ciclev10004497m.g Citrus clementina HOM05D006559 ORTHO05D008867 3.9e-112 409.8 634 38.6
Glyma.17G033200 Glycine max HOM05D006559 ORTHO05D008867 3.9e-112 409.8 665 37.3
Potri.010G144400 Populus trichocarpa HOM05D006559 ORTHO05D008867 3.9e-112 409.8 668 37.3
Solyc01g059920.4 Solanum lycopersicum HOM05D006559 ORTHO05D008867 3.9e-112 409.8 662 37.0
MSTRG.3859 Avicennia marina HOM05D006559 ORTHO05D008867 5.1e-112 409.5 655 37.6
Cfa008663 Carpinus fangiana HOM05D006559 ORTHO05D008867 8.7e-112 408.7 628 37.9
Sed0004607 Sechium edule HOM05D006559 ORTHO05D008867 8.7e-112 408.7 658 37.5
Carub.0003s1678 Capsella rubella HOM05D006559 ORTHO05D008867 1.9e-111 407.5 660 36.5
DCAR_002509 Daucus carota HOM05D006559 ORTHO05D008867 1.9e-111 407.5 657 37.9
Ca_21444_v3 Cicer arietinum L. HOM05D006559 ORTHO05D008867 3.3e-111 406.8 666 38.0
Os03g0832500 Oryza sativa ssp. japonica HOM05D006559 ORTHO05D008867 7.3e-111 405.6 649 36.5
Phvul.003G113900 Phaseolus vulgaris HOM05D006559 ORTHO05D008867 1.3e-110 404.8 659 37.2
Nn3g21720 Nelumbo nucifera HOM05D006559 ORTHO05D008867 2.1e-110 404.1 649 37.9
Psat4g024080 Pisum sativum HOM05D006559 ORTHO05D008867 2.8e-110 403.7 633 38.4
Sabra10G0111500 Salix brachista HOM05D006559 ORTHO05D008867 3.6e-110 403.3 634 37.7
PSO210G1317 Papaver somniferum HOM05D006559 ORTHO05D008867 6.2e-110 402.5 636 37.1
Nitab4.5_0011895g0010 Nicotiana tabacum HOM05D006559 ORTHO05D008867 8.1e-110 402.1 630 38.4
Sc19g0003140 Simmondsia chinensis HOM05D006559 ORTHO05D008867 8.1e-110 402.1 628 37.3
Sp3g15250 Schrenkiella parvula HOM05D006559 ORTHO05D008867 1.4e-109 401.4 664 36.0
FvH4_4g19640 Fragaria vesca HOM05D006559 ORTHO05D008867 1.8e-109 401.0 670 37.8
Thhalv10020210m.g Eutrema salsugineum HOM05D006559 ORTHO05D008867 4.0e-109 399.8 650 37.1
AUR62039288 Chenopodium quinoa HOM05D006559 ORTHO05D008867 7.6e-108 395.6 672 35.6
SalBow8G4902 Salvia bowleyana HOM05D006559 ORTHO05D008867 9.9e-108 395.2 627 37.0
Zm00001eb063450 Zea mays HOM05D006559 ORTHO05D008867 4.9e-107 392.9 649 36.5
Lsat_1_v5_gn_6_116281 Lactuca sativa HOM05D006559 ORTHO05D008867 1.4e-106 391.3 652 37.1
TPR.G5276 Trifolium pratense HOM05D006559 ORTHO05D008867 1.4e-106 391.3 673 36.8
FAN12G1983 Fragaria x ananassa HOM05D006559 ORTHO05D008867 5.4e-106 389.4 682 37.1
BcaC09g48654 Brassica carinata HOM05D006559 ORTHO05D008867 7.1e-106 389.0 678 36.1
Aa31LG8G4060 Aethionema arabicum HOM05D006559 ORTHO05D008867 9.3e-106 388.7 658 35.7
A01p37300 Brassica napus HOM05D006559 ORTHO05D008867 2.7e-105 387.1 668 36.2
BraA01t03788Z Brassica rapa HOM05D006559 ORTHO05D008867 4.6e-105 386.3 668 36.1
CANSAT64G0770 Cannabis sativa HOM05D006559 ORTHO05D008867 7.9e-105 385.6 631 36.9
AUR62016199 Chenopodium quinoa HOM05D006559 ORTHO05D008867 7.9e-105 385.6 726 33.6
Haze_11682 Corylus avellana HOM05D006559 ORTHO05D008867 7.9e-105 385.6 615 38.0
C01p47240 Brassica napus HOM05D006559 ORTHO05D008867 1.3e-104 384.8 679 36.1
Lj6A690G72 Lonicera japonica HOM05D006559 ORTHO05D008867 2.3e-104 384.0 512 42.2
BolC1t04694H Brassica oleracea HOM05D006559 ORTHO05D008867 5.1e-104 382.9 666 36.2
Prupe.1G118000 Prunus persica HOM05D006559 ORTHO05D008867 6.6e-104 382.5 627 36.8
MD13G1155000 Malus domestica HOM05D006559 ORTHO05D008867 1.1e-103 381.7 631 37.2
ECA246G2012 Erigeron canadensis HOM05D006559 ORTHO05D008867 1.3e-102 378.3 666 36.0
EL10Ac3g05493 Beta vulgaris HOM05D006559 ORTHO05D008867 3.6e-102 376.7 696 34.3
CSS0039775 Camellia sinensis var. sinensis HOM05D006559 ORTHO05D008867 4.8e-102 376.3 657 36.4
Nitab4.5_0000169g0190 Nicotiana tabacum HOM05D006559 ORTHO05D008867 1.2e-97 361.7 525 40.2
Ah.13g071910 Amaranthus hybridus HOM05D006559 ORTHO05D008867 7.9e-97 359.0 639 33.6
Actinidia40373 Actinidia chinensis HOM05D006559 ORTHO05D008867 2.3e-96 357.5 455 42.9
HanXRQChr08g0236161 Helianthus annuus HOM05D006559 ORTHO05D008867 2.5e-95 354.0 650 34.2
Atru.chr4.3010 Acer truncatum HOM05D006559 ORTHO05D008867 4.0e-93 346.7 629 34.7
CiPaw.01G113700 Carya illinoinensis HOM05D006559 ORTHO05D008867 6.9e-93 345.9 514 39.1
SHI00146 Sapria himalayana HOM05D006559 ORTHO05D008867 5.8e-92 342.8 637 34.9
FAN07G1421 Fragaria x ananassa HOM05D006559 ORTHO05D008867 1.9e-90 337.8 639 35.1
Duzib151G0228 Durio zibethinus HOM05D006559 ORTHO05D008867 3.7e-86 323.6 651 32.7
COL.COLO4_34624 Corchorus olitorius HOM05D006559 ORTHO05D008867 3.1e-85 320.5 661 34.0
SMO239G0200 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 1.2e-84 318.5 521 38.0
SMO116G0303 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 1.3e-83 315.1 464 41.2
ClCG00G004240 Citrullus lanatus HOM05D006559 ORTHO05D008867 2.3e-80 304.3 515 37.5
Hma1.2p1_0078F.1_g039960 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 5.7e-79 299.7 509 37.3
CARHR092280 Cardamine hirsuta HOM05D006559 ORTHO05D008867 4.8e-78 296.6 407 40.3
unitig_32.g11851 Utricularia gibba HOM05D006559 ORTHO05D008867 7.4e-71 272.7 631 32.3
HPP92_015242 Vanilla planifolia HOM05D006559 ORTHO05D008867 2.8e-70 270.8 632 30.2
TAR365G1053 Trochodendron aralioides HOM05D006559 ORTHO05D008867 1.8e-53 214.9 246 45.9
SMO195G0016 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 6.5e-43 179.9 395 32.7
RcHm_v2.0_Chr4g0424931 Rosa chinensis HOM05D006559 ORTHO05D008867 1.9e-42 178.3 398 32.7
TPR.G16835 Trifolium pratense HOM05D006559 ORTHO05D008867 2.0e-28 131.7 392 27.8
Actinidia27128 Actinidia chinensis HOM05D006559 ORTHO05D008867 1.9e-18 98.6 101 52.5
RcHm_v2.0_Chr4g0425061 Rosa chinensis HOM05D006559 ORTHO05D008867 2.0e-15 88.6 130 39.2
AUR62044438 Chenopodium quinoa HOM05D006559 ORTHO05D008867 2.4e-13 81.6 196 30.1
AUR62035935 Chenopodium quinoa HOM05D006559 ORTHO05D008867 4.6e-12 77.4 228 26.8
Cc03_g00880 Coffea canephora HOM05D006559 ORTHO05D008867 6.0e-12 77.0 88 48.9
MBI14_g17950_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D241410 1.2e-07 62.8 146 28.8
RcHm_v2.0_Chr3g0458131 Rosa chinensis HOM05D006559 ORTHO05D050582 7.6e-07 60.1 74 44.6


User provided reference genes

Program Settings