Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_344.4010 Anthoceros agrestis HOM05D004003 ORTHO05D004595 5.8e-71 270.8 137 100.0
Pp3c5_12290 Physcomitrium patens HOM05D004003 ORTHO05D004595 6.3e-49 197.6 134 71.6
Mapoly0111s0029 Marchantia polymorpha HOM05D004003 ORTHO05D004595 4.1e-48 194.9 134 67.9
SEGI_14933 Sequoiadendron giganteum HOM05D004003 ORTHO05D004595 2.1e-44 182.6 135 66.7
PSO017G3679 Papaver somniferum HOM05D004003 ORTHO05D004595 2.7e-44 182.2 136 66.2
PSO478G4828 Papaver somniferum HOM05D004003 ORTHO05D004595 3.6e-44 181.8 137 65.7
SalBow2G3526 Salvia bowleyana HOM05D004003 ORTHO05D004595 3.6e-44 181.8 136 64.7
Aqoxy7G00202 Aquilegia oxysepala HOM05D004003 ORTHO05D004595 6.1e-44 181.0 134 65.7
arahy.Tifrunner.gnm1.ann1.SB31NP Arachis hypogaea HOM05D004003 ORTHO05D004595 1.0e-43 180.3 134 63.4
Ca_20595_v3 Cicer arietinum L. HOM05D004003 ORTHO05D004595 1.8e-43 179.5 134 64.2
SGA_v2.0_scaffold10G05280 Striga asiatica HOM05D004003 ORTHO05D004595 1.8e-43 179.5 136 64.7
arahy.Tifrunner.gnm1.ann1.R03NAB Arachis hypogaea HOM05D004003 ORTHO05D004595 2.3e-43 179.1 134 62.7
Hund13071 Selenicereus undatus HOM05D004003 ORTHO05D004595 2.3e-43 179.1 134 64.2
unitig_0.g1158 Utricularia gibba HOM05D004003 ORTHO05D004595 2.3e-43 179.1 136 64.0
ClCG05G008500 Citrullus lanatus HOM05D004003 ORTHO05D004595 3.9e-43 178.3 134 62.7
Cc02_g02230 Coffea canephora HOM05D004003 ORTHO05D004595 3.9e-43 178.3 136 64.0
Gohir.D11G013100 Gossypium hirsutum HOM05D004003 ORTHO05D004595 3.9e-43 178.3 134 64.2
Oeu003331.1 Olea europaea HOM05D004003 ORTHO05D004595 3.9e-43 178.3 136 64.0
Actinidia31844 Actinidia chinensis HOM05D004003 ORTHO05D004595 5.1e-43 177.9 134 64.2
COL.COLO4_30289 Corchorus olitorius HOM05D004003 ORTHO05D004595 5.1e-43 177.9 134 63.4
Dinv35269 Davidia involucrata HOM05D004003 ORTHO05D004595 5.1e-43 177.9 134 63.4
Sed0014667 Sechium edule HOM05D004003 ORTHO05D004595 5.1e-43 177.9 134 63.4
Duzib084G0289 Durio zibethinus HOM05D004003 ORTHO05D004595 6.7e-43 177.6 134 63.4
Lalb_Chr19g0130491 Lupinus albus HOM05D004003 ORTHO05D004595 6.7e-43 177.6 134 63.4
Actinidia03142 Actinidia chinensis HOM05D004003 ORTHO05D004595 8.8e-43 177.2 134 63.4
TWI23G0858 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 8.8e-43 177.2 134 63.4
GSVIVG01028820001 Vitis vinifera HOM05D004003 ORTHO05D004595 8.8e-43 177.2 134 63.4
MELO3C006949.2 Cucumis melo HOM05D004003 ORTHO05D004595 1.1e-42 176.8 134 62.7
Duzib205G1856 Durio zibethinus HOM05D004003 ORTHO05D004595 1.1e-42 176.8 134 63.4
Oeu061668.1 Olea europaea HOM05D004003 ORTHO05D004595 1.1e-42 176.8 136 64.0
EL10Ac2g03211 Beta vulgaris HOM05D004003 ORTHO05D004595 2.0e-42 176.0 134 63.4
CsaV3_3G017590 Cucumis sativus L. HOM05D004003 ORTHO05D004595 2.0e-42 176.0 134 61.9
Gohir.A11G012800 Gossypium hirsutum HOM05D004003 ORTHO05D004595 2.5e-42 175.6 134 62.7
Phvul.004G105700 Phaseolus vulgaris HOM05D004003 ORTHO05D004595 2.5e-42 175.6 134 64.2
CSS0000705 Camellia sinensis var. sinensis HOM05D004003 ORTHO05D004595 3.3e-42 175.3 134 62.7
Migut.F01081 Erythranthe guttata HOM05D004003 ORTHO05D004595 3.3e-42 175.3 136 63.2
Gorai.007G013400 Gossypium raimondii HOM05D004003 ORTHO05D004595 3.3e-42 175.3 136 64.0
Hma1.2p1_1713F.1_g298900 Hydrangea macrophylla HOM05D004003 ORTHO05D004595 3.3e-42 175.3 134 62.7
Gohir.D12G255500 Gossypium hirsutum HOM05D004003 ORTHO05D004595 4.3e-42 174.9 134 63.4
Gohir.D12G255550 Gossypium hirsutum HOM05D004003 ORTHO05D004595 4.3e-42 174.9 134 63.4
Lj2g0001989 Lotus japonicus HOM05D004003 ORTHO05D004595 4.3e-42 174.9 134 62.7
Lalb_Chr03g0034981 Lupinus albus HOM05D004003 ORTHO05D004595 4.3e-42 174.9 134 62.7
Nn6g32413 Nelumbo nucifera HOM05D004003 ORTHO05D004595 4.3e-42 174.9 134 64.2
Sed0009881 Sechium edule HOM05D004003 ORTHO05D004595 4.3e-42 174.9 134 62.7
VMungo0464G2050 Vigna mungo HOM05D004003 ORTHO05D004595 4.3e-42 174.9 134 64.2
Thecc.03G186200 Theobroma cacao HOM05D004003 ORTHO05D004595 5.7e-42 174.5 134 62.7
MSTRG.8697 Avicennia marina HOM05D004003 ORTHO05D004595 7.4e-42 174.1 136 61.8
FvH4_7g30480 Fragaria vesca HOM05D004003 ORTHO05D004595 7.4e-42 174.1 134 62.7
FAN01G1512 Fragaria x ananassa HOM05D004003 ORTHO05D004595 7.4e-42 174.1 134 62.7
FAN06G3020 Fragaria x ananassa HOM05D004003 ORTHO05D004595 7.4e-42 174.1 134 62.7
FAN10G2159 Fragaria x ananassa HOM05D004003 ORTHO05D004595 7.4e-42 174.1 134 62.7
Gorai.008G273600 Gossypium raimondii HOM05D004003 ORTHO05D004595 7.4e-42 174.1 134 63.4
RcHm_v2.0_Chr1g0378851 Rosa chinensis HOM05D004003 ORTHO05D004595 7.4e-42 174.1 134 62.7
Sc14g0006860 Simmondsia chinensis HOM05D004003 ORTHO05D004595 7.4e-42 174.1 134 61.9
Lsat_1_v5_gn_9_56860 Lactuca sativa HOM05D004003 ORTHO05D004595 9.7e-42 173.7 138 61.6
Peaxi162Scf00444g00034 Petunia axillaris HOM05D004003 ORTHO05D004595 9.7e-42 173.7 136 62.5
Psat0s1604g0040 Pisum sativum HOM05D004003 ORTHO05D004595 9.7e-42 173.7 134 60.4
QL09p012375 Quercus lobata HOM05D004003 ORTHO05D004595 9.7e-42 173.7 134 63.4
TAR629G0127 Trochodendron aralioides HOM05D004003 ORTHO05D004595 9.7e-42 173.7 134 62.7
CDE05G0545 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 1.3e-41 173.3 135 63.7
CDE05G3305 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 1.3e-41 173.3 135 63.7
AUR62037745 Chenopodium quinoa HOM05D004003 ORTHO05D004595 1.3e-41 173.3 134 61.9
Eucgr.A02717 Eucalyptus grandis HOM05D004003 ORTHO05D004595 1.3e-41 173.3 134 61.9
Glyma.09G129000 Glycine max HOM05D004003 ORTHO05D004595 1.3e-41 173.3 134 63.4
Psat5g299680 Pisum sativum HOM05D004003 ORTHO05D004595 1.3e-41 173.3 134 60.4
Ah.11g045360 Amaranthus hybridus HOM05D004003 ORTHO05D004595 1.7e-41 172.9 134 62.7
FAN03G0349 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.7e-41 172.9 134 61.9
FAN03G2611 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.7e-41 172.9 134 61.9
FAN06G1184 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.7e-41 172.9 134 61.9
TPR.G27150 Trifolium pratense HOM05D004003 ORTHO05D004595 1.7e-41 172.9 134 60.4
Aa31LG3G9080 Aethionema arabicum HOM05D004003 ORTHO05D004595 2.2e-41 172.6 135 61.5
THA.LOC104800278 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 2.2e-41 172.6 134 61.9
Actinidia08590 Actinidia chinensis HOM05D004003 ORTHO05D004595 2.8e-41 172.2 134 61.9
Lsat_1_v5_gn_2_131500 Lactuca sativa HOM05D004003 ORTHO05D004595 2.8e-41 172.2 139 61.2
Prupe.2G302600 Prunus persica HOM05D004003 ORTHO05D004595 2.8e-41 172.2 134 61.2
CBR_g31069 Chara braunii HOM05D004003 ORTHO05D004595 3.7e-41 171.8 133 63.2
DCAR_010652 Daucus carota HOM05D004003 ORTHO05D004595 3.7e-41 171.8 136 61.8
Gohir.A12G253200 Gossypium hirsutum HOM05D004003 ORTHO05D004595 3.7e-41 171.8 134 62.7
Atru.chr1.335 Acer truncatum HOM05D004003 ORTHO05D004595 4.8e-41 171.4 134 63.4
FAN10G2319 Fragaria x ananassa HOM05D004003 ORTHO05D004595 4.8e-41 171.4 134 61.9
Medtr6g053280 Medicago truncatula HOM05D004003 ORTHO05D004595 4.8e-41 171.4 134 61.2
Nitab4.5_0011314g0010 Nicotiana tabacum HOM05D004003 ORTHO05D004595 4.8e-41 171.4 136 63.2
THA.LOC104825117 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 4.8e-41 171.4 134 61.9
AT5G52840 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 6.3e-41 171.0 134 61.9
CANSAT21G1389 Cannabis sativa HOM05D004003 ORTHO05D004595 6.3e-41 171.0 134 62.7
CANSAT21G1446 Cannabis sativa HOM05D004003 ORTHO05D004595 6.3e-41 171.0 134 62.7
AL8G27280 Arabidopsis lyrata HOM05D004003 ORTHO05D004595 8.2e-41 170.6 134 61.9
BcaC01g06202 Brassica carinata HOM05D004003 ORTHO05D004595 8.2e-41 170.6 134 61.9
A03p15550 Brassica napus HOM05D004003 ORTHO05D004595 8.2e-41 170.6 134 61.9
C03p18160 Brassica napus HOM05D004003 ORTHO05D004595 8.2e-41 170.6 134 61.9
BolC3t14217H Brassica oleracea HOM05D004003 ORTHO05D004595 8.2e-41 170.6 134 61.9
CAN.G126.15 Capsicum annuum HOM05D004003 ORTHO05D004595 8.2e-41 170.6 136 63.2
Ciclev10006072m.g Citrus clementina HOM05D004003 ORTHO05D004595 8.2e-41 170.6 134 60.4
Thhalv10014849m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 8.2e-41 170.6 134 61.9
HanXRQChr15g0494181 Helianthus annuus HOM05D004003 ORTHO05D004595 8.2e-41 170.6 138 60.9
Manes.14G021000 Manihot esculenta HOM05D004003 ORTHO05D004595 8.2e-41 170.6 134 60.4
PGR042G1718 Punica granatum HOM05D004003 ORTHO05D004595 8.2e-41 170.6 134 61.2
BcaB01g04212 Brassica carinata HOM05D004003 ORTHO05D004595 1.1e-40 170.2 134 61.9
BraA03t10847Z Brassica rapa HOM05D004003 ORTHO05D004595 1.1e-40 170.2 134 61.9
Carub.0008s1300 Capsella rubella HOM05D004003 ORTHO05D004595 1.1e-40 170.2 134 61.2
Thhalv10026409m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 1.1e-40 170.2 134 61.2
Lj1A1007T57 Lonicera japonica HOM05D004003 ORTHO05D004595 1.1e-40 170.2 136 61.8
Lj1A1007T58 Lonicera japonica HOM05D004003 ORTHO05D004595 1.1e-40 170.2 136 61.8
Manes.06G153700 Manihot esculenta HOM05D004003 ORTHO05D004595 1.1e-40 170.2 134 61.2
Rhsim09G0201100 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.1e-40 170.2 134 60.4
Sp7g25950 Schrenkiella parvula HOM05D004003 ORTHO05D004595 1.1e-40 170.2 135 60.0
CiPaw.06G004300 Carya illinoinensis HOM05D004003 ORTHO05D004595 1.4e-40 169.9 134 59.7
Dinv28379 Davidia involucrata HOM05D004003 ORTHO05D004595 1.4e-40 169.9 134 61.9
Sp6g15000 Schrenkiella parvula HOM05D004003 ORTHO05D004595 1.4e-40 169.9 134 61.9
ATR0721G154 Amborella trichopoda HOM05D004003 ORTHO05D004595 1.8e-40 169.5 130 63.1
CARHR265770 Cardamine hirsuta HOM05D004003 ORTHO05D004595 1.8e-40 169.5 134 61.9
Solyc03g007660.4 Solanum lycopersicum HOM05D004003 ORTHO05D004595 1.8e-40 169.5 136 62.5
Sopen03g003590 Solanum pennellii HOM05D004003 ORTHO05D004595 1.8e-40 169.5 136 62.5
A02p11580 Brassica napus HOM05D004003 ORTHO05D004595 2.4e-40 169.1 134 61.2
BraA02t06220Z Brassica rapa HOM05D004003 ORTHO05D004595 2.4e-40 169.1 134 61.2
MD01G1210300 Malus domestica HOM05D004003 ORTHO05D004595 2.4e-40 169.1 134 61.9
Zm00001eb015010 Zea mays HOM05D004003 ORTHO05D004595 2.4e-40 169.1 142 61.3
BraA10t43109Z Brassica rapa HOM05D004003 ORTHO05D004595 3.1e-40 168.7 134 61.2
Nitab4.5_0000472g0260 Nicotiana tabacum HOM05D004003 ORTHO05D004595 3.1e-40 168.7 136 62.5
MD07G1280400 Malus domestica HOM05D004003 ORTHO05D004595 4.1e-40 168.3 134 60.4
Sopen06g012130 Solanum pennellii HOM05D004003 ORTHO05D004595 4.1e-40 168.3 136 62.5
TWI14G1326 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 4.1e-40 168.3 137 59.9
BcaB08g35638 Brassica carinata HOM05D004003 ORTHO05D004595 5.3e-40 167.9 134 61.2
A10p10290 Brassica napus HOM05D004003 ORTHO05D004595 5.3e-40 167.9 134 61.2
ECA232G1033 Erigeron canadensis HOM05D004003 ORTHO05D004595 5.3e-40 167.9 138 58.7
Rhsim03G0192400 Rhododendron simsii HOM05D004003 ORTHO05D004595 5.3e-40 167.9 129 62.8
Solyc06g036350.3 Solanum lycopersicum HOM05D004003 ORTHO05D004595 5.3e-40 167.9 136 62.5
PGSC0003DMG400028905 Solanum tuberosum HOM05D004003 ORTHO05D004595 5.3e-40 167.9 136 61.8
BcaC04g20535 Brassica carinata HOM05D004003 ORTHO05D004595 1.2e-39 166.8 134 61.2
C09p42440 Brassica napus HOM05D004003 ORTHO05D004595 1.2e-39 166.8 134 61.2
DCAR_020275 Daucus carota HOM05D004003 ORTHO05D004595 1.2e-39 166.8 136 61.0
Potri.004G071900 Populus trichocarpa HOM05D004003 ORTHO05D004595 1.2e-39 166.8 130 63.8
Os03g0313000 Oryza sativa ssp. japonica HOM05D004003 ORTHO05D004595 1.5e-39 166.4 142 59.9
HPP92_001384 Vanilla planifolia HOM05D004003 ORTHO05D004595 3.4e-39 165.2 140 59.3
BcaB05g21985 Brassica carinata HOM05D004003 ORTHO05D004595 4.5e-39 164.9 134 60.4
ECA233G0998 Erigeron canadensis HOM05D004003 ORTHO05D004595 4.5e-39 164.9 138 60.1
Sabra17G0124400 Salix brachista HOM05D004003 ORTHO05D004595 5.9e-39 164.5 130 63.1
Potri.017G149100 Populus trichocarpa HOM05D004003 ORTHO05D004595 1.3e-38 163.3 130 63.1
Sabra04G0047300 Salix brachista HOM05D004003 ORTHO05D004595 2.2e-38 162.5 130 63.8
C02p19300 Brassica napus HOM05D004003 ORTHO05D004595 1.4e-37 159.8 134 60.4
BolC2t08066H Brassica oleracea HOM05D004003 ORTHO05D004595 1.4e-37 159.8 134 60.4
vmacro06614 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 9.7e-34 147.1 190 44.2
SMO119G0129 Selaginella moellendorffii HOM05D004003 ORTHO05D004595 4.8e-33 144.8 120 58.3
PSO478G1314 Papaver somniferum HOM05D004003 ORTHO05D004595 1.1e-32 143.7 111 61.3
AUR62042233 Chenopodium quinoa HOM05D004003 ORTHO05D004595 9.1e-32 140.6 134 53.0
HanXRQChr10g0304961 Helianthus annuus HOM05D004003 ORTHO05D004595 7.2e-29 131.0 107 64.5
BolC9t57124H Brassica oleracea HOM05D004003 ORTHO05D004595 1.0e-27 127.1 134 49.3
TAR636G0624 Trochodendron aralioides HOM05D004003 ORTHO05D004595 3.3e-26 122.1 119 52.1
Haze_00063 Corylus avellana HOM05D004003 ORTHO05D004595 4.4e-26 121.7 95 58.9
Ah.10g032500 Amaranthus hybridus HOM05D004003 ORTHO05D004595 1.7e-25 119.8 130 46.9
Zm00001eb395850 Zea mays HOM05D004003 ORTHO05D004595 1.7e-25 119.8 111 58.6
MD00G1172600 Malus domestica HOM05D004003 ORTHO05D004595 8.2e-25 117.5 117 52.1
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 2.1e-20 102.8 105 54.3
RcHm_v2.0_Chr1g0362161 Rosa chinensis HOM05D004003 ORTHO05D004595 2.1e-20 102.8 86 60.5
BcaC03g14495 Brassica carinata HOM05D004003 ORTHO05D004595 3.6e-20 102.1 88 59.1
MD13G1261600 Malus domestica HOM05D004003 ORTHO05D004595 8.0e-20 100.9 94 54.3
Thhalv10015894m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 2.6e-18 95.9 136 42.6
Ah.03g141030 Amaranthus hybridus HOM05D004003 ORTHO05D004595 4.4e-18 95.1 93 49.5
Psat6g098040 Pisum sativum HOM05D000395 ORTHO05D004595 1.4e-16 90.1 95 51.6
vmacro09809 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 5.3e-16 88.2 123 38.2
MCO01G593 Micromonas commoda HOM05D004003 ORTHO05D004595 2.0e-15 86.3 104 47.1
MCO01G594 Micromonas commoda HOM05D004003 ORTHO05D004595 2.0e-15 86.3 104 47.1
Dinv24022 Davidia involucrata HOM05D004003 ORTHO05D004595 1.9e-13 79.7 72 51.4
ECA240G1980 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.6e-12 76.6 94 41.5
ECA240G4361 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.6e-12 76.6 94 41.5
ECA238G0868 Erigeron canadensis HOM05D004003 ORTHO05D004595 3.6e-12 75.5 145 35.2
Cre13.g568800 Chlamydomonas reinhardtii HOM05D004003 ORTHO05D004595 4.7e-12 75.1 98 42.9
ECA240G4047 Erigeron canadensis HOM05D004003 ORTHO05D004595 4.7e-12 75.1 101 39.6
CAN.G204.11 Capsicum annuum HOM05D004003 ORTHO05D004595 8.0e-12 74.3 55 61.8
Haze_26197 Corylus avellana HOM05D004003 ORTHO05D004595 4.4e-10 68.6 95 33.7
PRCOL_00006691 Prasinoderma coloniale HOM05D004003 ORTHO05D004595 4.1e-08 62.0 122 37.7
Rhsim03G0124900 Rhododendron simsii HOM05D004003 ORTHO05D004595 2.0e-07 59.7 55 54.5


User provided reference genes

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