Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 0.0e+00 1292.7 658 100.0
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 7.0e-239 830.9 692 60.8
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 9.8e-225 783.9 690 58.8
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 3.4e-177 625.9 678 49.3
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 1.6e-163 580.5 690 46.4
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 3.7e-163 579.3 688 46.8
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 6.9e-162 575.1 687 45.9
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 7.7e-161 571.6 689 45.7
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 3.8e-160 569.3 695 48.2
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 2.5e-159 566.6 690 45.5
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 8.8e-157 558.1 697 45.3
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 1.1e-156 557.8 691 44.1
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 2.5e-156 556.6 688 43.9
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 2.5e-156 556.6 697 45.5
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 4.3e-156 555.8 688 45.3
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 9.7e-156 554.7 688 43.8
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 3.7e-155 552.7 687 43.8
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 8.2e-155 551.6 690 44.6
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 1.1e-154 551.2 683 44.4
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.8e-154 550.4 685 43.8
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.9e-154 548.5 688 43.3
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 1.5e-153 547.4 688 44.0
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 3.4e-153 546.2 693 44.9
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 7.7e-153 545.0 696 44.0
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 1.0e-152 544.7 679 45.7
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 8.5e-152 541.6 688 44.2
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 1.9e-151 540.4 696 43.5
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 2.5e-151 540.0 688 43.8
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 7.2e-151 538.5 688 45.2
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 7.2e-151 538.5 696 43.0
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 1.2e-150 537.7 686 43.6
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 2.1e-150 537.0 644 46.3
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 2.7e-150 536.6 688 43.8
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 1.8e-149 533.9 687 43.5
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 3.0e-149 533.1 691 42.1
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 5.1e-149 532.3 687 44.8
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 5.1e-149 532.3 690 42.6
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 2.6e-148 530.0 701 42.9
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 2.6e-148 530.0 688 43.6
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 3.3e-148 529.6 692 42.5
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 3.3e-148 529.6 691 43.1
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 5.7e-148 528.9 708 43.5
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 1.7e-147 527.3 686 43.9
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 2.2e-147 526.9 691 43.3
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 2.8e-147 526.6 708 43.6
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 6.3e-147 525.4 702 43.0
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 6.3e-147 525.4 712 41.4
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.1e-146 524.6 690 42.6
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.1e-146 524.6 690 42.5
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 1.4e-146 524.2 687 42.5
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 1.8e-146 523.9 686 43.3
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 4.1e-146 522.7 687 43.1
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 4.1e-146 522.7 683 42.9
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 4.1e-146 522.7 734 42.1
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 5.3e-146 522.3 691 43.7
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 5.3e-146 522.3 691 43.7
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 1.6e-145 520.8 687 43.1
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 3.5e-145 519.6 690 41.9
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 5.9e-145 518.8 690 42.6
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 7.7e-145 518.5 690 42.8
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 1.3e-144 517.7 652 44.0
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 1.7e-144 517.3 685 42.5
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 2.9e-144 516.5 688 44.9
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 1.9e-143 513.8 687 42.4
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 3.2e-143 513.1 687 42.1
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 4.2e-143 512.7 669 44.2
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 3.6e-142 509.6 683 42.3
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 4.7e-142 509.2 692 41.2
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 6.1e-142 508.8 684 44.0
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 3.0e-141 506.5 672 42.0
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 6.7e-141 505.4 695 41.4
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 4.4e-140 502.7 698 41.4
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 1.7e-139 500.7 673 42.8
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 2.2e-139 500.4 701 41.2
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 2.2e-139 500.4 701 41.2
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 2.2e-139 500.4 683 41.1
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 2.0e-137 493.8 683 41.3
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 2.7e-137 493.4 692 41.2
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 1.0e-136 491.5 695 41.0
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 1.7e-136 490.7 683 41.0
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 5.0e-136 489.2 696 40.8
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 8.5e-136 488.4 799 38.3
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 8.5e-136 488.4 700 40.3
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 4.7e-134 482.6 689 39.9
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 1.0e-133 481.5 689 41.8
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 1.4e-133 481.1 556 46.9
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 2.3e-133 480.3 682 40.0
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 1.8e-130 470.7 633 41.1
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 7.0e-130 468.8 487 49.1
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 1.2e-129 468.0 703 40.4
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 7.5e-124 448.7 583 43.1
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 2.2e-123 447.2 710 38.7
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 4.9e-123 446.0 620 41.6
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 1.9e-119 434.1 413 51.1
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 1.6e-113 414.5 428 50.2
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 2.0e-113 414.1 414 49.8
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 7.5e-108 395.6 700 37.4
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 9.8e-108 395.2 405 48.9
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 2.5e-103 380.6 687 36.7
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 2.3e-101 374.0 347 51.9
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 2.6e-100 370.5 701 37.2
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 2.1e-94 350.9 637 35.0
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 1.5e-92 344.7 356 50.6
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 3.4e-92 343.6 384 49.5
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 2.7e-81 307.4 491 37.7
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 1.8e-77 294.7 479 38.6
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 2.4e-77 294.3 347 44.4
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 3.4e-76 290.4 386 42.5
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 2.4e-74 284.3 491 36.0
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 1.3e-72 278.5 334 46.7
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 3.4e-68 263.8 298 48.0
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 2.1e-57 228.0 185 59.5
Haze_25491 Corylus avellana HOM05D005191 ORTHO05D006725 8.5e-43 179.5 394 31.2
Sabra06G0047500 Salix brachista HOM05D005191 ORTHO05D006725 1.3e-35 155.6 320 32.5
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 6.5e-35 153.3 154 50.0
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 6.5e-35 153.3 684 26.2
Ca_06948_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 1.0e-32 146.0 316 30.1
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 3.8e-27 127.5 143 47.6
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 2.2e-22 111.7 786 22.3
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 3.1e-21 107.8 327 27.8
CDE05G1976 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 9.4e-18 96.3 160 40.0
vmacro06156 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 2.6e-15 88.2 239 29.3
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 5.7e-15 87.0 79 50.6
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 3.7e-14 84.3 65 56.9
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.0e-11 73.9 265 24.9
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.5e-10 72.4 86 44.2
RcHm_v2.0_Chr5g0051701 Rosa chinensis HOM05D005191 ORTHO05D006725 1.0e-08 66.2 112 34.8
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 2.3e-08 65.1 51 60.8
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.8e-08 63.5 103 36.9
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 1.3e-06 59.3 58 55.2
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 1.7e-06 58.9 58 51.7
unitig_0.g2716 Utricularia gibba HOM05D005191 ORTHO05D006725 6.3e-06 57.0 150 28.7


User provided reference genes

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