Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 3.6e-140 501.5 245 100.0
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.0e-54 217.6 195 59.0
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 1.4e-54 217.2 153 66.7
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.8e-54 216.9 183 62.3
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 5.2e-54 215.3 163 64.4
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 6.8e-54 214.9 151 67.5
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 1.2e-53 214.2 152 65.8
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 2.0e-53 213.4 192 57.3
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 2.6e-53 213.0 213 51.6
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 3.4e-53 212.6 152 65.8
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 5.7e-53 211.8 197 55.8
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 7.5e-53 211.5 166 63.9
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 7.5e-53 211.5 163 63.2
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 1.3e-52 210.7 155 65.2
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 1.3e-52 210.7 152 65.8
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 1.7e-52 210.3 162 63.6
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 1.7e-52 210.3 194 56.2
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 1.7e-52 210.3 147 68.0
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 1.7e-52 210.3 155 66.5
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 1.7e-52 210.3 152 67.1
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 2.2e-52 209.9 197 55.8
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 2.2e-52 209.9 152 66.4
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 2.8e-52 209.5 161 61.5
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 2.8e-52 209.5 152 65.8
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 2.8e-52 209.5 152 65.8
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 3.7e-52 209.1 163 62.6
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 3.7e-52 209.1 152 65.1
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 3.7e-52 209.1 147 68.7
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 3.7e-52 209.1 188 55.9
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 4.9e-52 208.8 152 65.8
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 4.9e-52 208.8 150 66.7
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 4.9e-52 208.8 150 66.7
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 6.3e-52 208.4 152 65.8
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 1.1e-51 207.6 152 65.8
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 1.1e-51 207.6 152 65.8
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 1.1e-51 207.6 152 66.4
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.1e-51 207.6 147 68.0
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 1.1e-51 207.6 161 62.7
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 1.1e-51 207.6 142 69.0
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 1.4e-51 207.2 152 65.8
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.4e-51 207.2 147 68.0
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 1.4e-51 207.2 181 59.7
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 1.4e-51 207.2 152 66.4
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 1.8e-51 206.8 195 55.4
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 1.8e-51 206.8 205 54.6
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 1.8e-51 206.8 184 58.2
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 1.8e-51 206.8 152 65.8
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 5.4e-51 205.3 195 54.9
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 5.4e-51 205.3 180 59.4
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 7.0e-51 204.9 152 65.1
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 7.0e-51 204.9 162 61.1
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 9.2e-51 204.5 152 64.5
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 1.2e-50 204.1 210 52.9
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 1.2e-50 204.1 152 65.1
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 1.6e-50 203.8 152 63.8
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 2.0e-50 203.4 166 60.2
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 2.0e-50 203.4 152 63.8
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 3.5e-50 202.6 163 60.7
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 3.5e-50 202.6 211 52.6
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 3.5e-50 202.6 152 63.2
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 4.5e-50 202.2 163 60.7
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 4.5e-50 202.2 163 60.7
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 4.5e-50 202.2 152 64.5
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 5.9e-50 201.8 161 63.4
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 5.9e-50 201.8 171 60.8
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 5.9e-50 201.8 152 63.8
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 7.8e-50 201.4 167 61.7
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 1.0e-49 201.1 172 61.0
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 1.0e-49 201.1 163 60.7
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.3e-49 200.7 196 55.6
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 1.3e-49 200.7 167 61.7
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 1.3e-49 200.7 159 63.5
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 1.7e-49 200.3 163 60.7
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 1.7e-49 200.3 163 60.7
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 1.7e-49 200.3 152 63.8
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 1.7e-49 200.3 160 61.2
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 1.5e-48 197.2 152 61.8
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.9e-48 196.8 140 66.4
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 5.6e-48 195.3 161 60.9
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 7.3e-48 194.9 167 59.3
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 1.2e-47 194.1 152 63.2
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 1.6e-47 193.7 148 63.5
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 4.7e-47 192.2 193 53.4
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 8.0e-47 191.4 131 68.7
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 1.4e-46 190.7 121 72.7
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 1.4e-46 190.7 125 70.4
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 5.2e-46 188.7 153 61.4
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 5.2e-46 188.7 131 66.4
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 5.2e-46 188.7 120 71.7
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 1.2e-45 187.6 121 71.1
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 7.5e-45 184.9 161 59.0
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 2.2e-44 183.3 164 56.1
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 1.8e-43 180.3 185 51.4
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 4.6e-42 175.6 223 45.7
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 6.6e-41 171.8 145 55.9
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 1.1e-40 171.0 151 58.3
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 1.5e-40 170.6 152 56.6
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 9.5e-40 167.9 173 51.4
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 1.2e-39 167.5 144 54.2
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 1.8e-38 163.7 151 55.6
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 2.3e-38 163.3 156 55.1
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 3.1e-38 162.9 142 58.5
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 4.0e-38 162.5 152 55.9
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 8.9e-38 161.4 152 55.9
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.1e-35 154.5 96 72.9
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 2.0e-34 150.2 146 52.7
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 6.6e-33 145.2 148 49.3
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.2e-31 141.0 81 77.8
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 4.7e-31 139.0 81 77.8
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 4.0e-30 136.0 111 58.6
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.7e-28 130.6 76 77.6
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 6.4e-28 128.6 101 61.4
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 1.2e-21 107.8 69 69.6
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 7.6e-21 105.1 154 44.2
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 1.3e-20 104.4 145 40.0
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 5.4e-19 99.0 58 75.9
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 5.2e-14 82.4 82 42.7
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 5.2e-14 82.4 105 42.9
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 8.4e-12 75.1 64 56.2
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 1.4e-11 74.3 52 63.5
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 2.3e-09 67.0 44 63.6
CSS0040457 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 4.3e-08 62.8 58 53.4
Sabra13G0011100 Salix brachista HOM05D006169 ORTHO05D007698 6.2e-07 58.9 86 40.7
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 2.4e-06 57.0 59 50.8
CSS0014495 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 6.9e-06 55.5 47 59.6


User provided reference genes

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