Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_344.1485 Anthoceros agrestis HOM05D003285 ORTHO05D003740 4.2e-177 624.8 359 100.0
Pp3c11_15940 Physcomitrium patens HOM05D003285 ORTHO05D003740 3.6e-11 73.6 38 78.9
vmacro06535 Vaccinium macrocarpon HOM05D000036 ORTHO05D000095 6.1e-11 72.8 235 30.2
SEGI_09051 Sequoiadendron giganteum HOM05D000281 ORTHO05D009440 1.4e-10 71.6 190 30.5
Glyma.14G189000 Glycine max HOM05D003285 ORTHO05D003740 1.8e-10 71.2 63 57.1
Pp3c3_25910 Physcomitrium patens HOM05D003285 ORTHO05D003740 1.8e-10 71.2 34 82.4
PSO384G5091 Papaver somniferum HOM05D003285 ORTHO05D003740 5.2e-10 69.7 80 46.2
Glyma.02G221700 Glycine max HOM05D003285 ORTHO05D003740 6.7e-10 69.3 63 57.1
Eucgr.A00973 Eucalyptus grandis HOM05D003285 ORTHO05D003740 8.8e-10 68.9 105 40.0
Ca_05536_v3 Cicer arietinum L. HOM05D003285 ORTHO05D003740 1.1e-09 68.6 69 52.2
Phvul.007G085900 Phaseolus vulgaris HOM05D003285 ORTHO05D003740 1.1e-09 68.6 63 54.0
PSO782G3038 Papaver somniferum HOM05D003285 ORTHO05D003740 1.5e-09 68.2 68 52.9
PGR142G3185 Punica granatum HOM05D003285 ORTHO05D003740 1.5e-09 68.2 71 53.5
Aa31LG5G1300 Aethionema arabicum HOM05D003285 ORTHO05D003740 2.0e-09 67.8 40 72.5
TPR.G27920 Trifolium pratense HOM05D003285 ORTHO05D003740 2.0e-09 67.8 66 50.0
Duzib205G0511 Durio zibethinus HOM05D003285 ORTHO05D003740 2.6e-09 67.4 40 70.0
LjContig00155g0008247 Lotus japonicus HOM05D003285 ORTHO05D003740 2.6e-09 67.4 81 46.9
Medtr5g068760 Medicago truncatula HOM05D003285 ORTHO05D003740 2.6e-09 67.4 62 54.8
QL09p006144 Quercus lobata HOM05D003285 ORTHO05D003740 2.6e-09 67.4 38 76.3
Gohir.D11G016800 Gossypium hirsutum HOM05D003285 ORTHO05D003740 3.3e-09 67.0 40 67.5
Gorai.007G017600 Gossypium raimondii HOM05D003285 ORTHO05D003740 3.3e-09 67.0 40 67.5
Nn7g38272 Nelumbo nucifera HOM05D003285 ORTHO05D003740 3.3e-09 67.0 38 73.7
Pp3c12_15800 Physcomitrium patens HOM05D003285 ORTHO05D003740 3.3e-09 67.0 34 82.4
Oeu055416.1 Olea europaea HOM05D003285 ORTHO05D003740 5.7e-09 66.2 69 49.3
BcaB01g02372 Brassica carinata HOM05D003285 ORTHO05D003740 7.4e-09 65.9 40 70.0
BcaB01g02373 Brassica carinata HOM05D003285 ORTHO05D003740 7.4e-09 65.9 40 70.0
BcaC01g06810 Brassica carinata HOM05D003285 ORTHO05D003740 7.4e-09 65.9 40 70.0
A03p31560 Brassica napus HOM05D003285 ORTHO05D003740 7.4e-09 65.9 40 70.0
C03p38540 Brassica napus HOM05D003285 ORTHO05D003740 7.4e-09 65.9 40 70.0
BolC3t16127H Brassica oleracea HOM05D003285 ORTHO05D003740 7.4e-09 65.9 40 70.0
BraA03t12334Z Brassica rapa HOM05D003285 ORTHO05D003740 7.4e-09 65.9 40 70.0
CiPaw.05G208100 Carya illinoinensis HOM05D003285 ORTHO05D003740 7.4e-09 65.9 38 73.7
Pp3c10_17540 Physcomitrium patens HOM05D003285 ORTHO05D003740 7.4e-09 65.9 34 79.4
Thecc.03G211400 Theobroma cacao HOM05D003285 ORTHO05D003740 7.4e-09 65.9 40 67.5
MELO3C024848.2 Cucumis melo HOM05D003285 ORTHO05D003740 1.3e-08 65.1 38 71.1
CsaV3_4G009810 Cucumis sativus L. HOM05D003285 ORTHO05D003740 1.3e-08 65.1 38 71.1
SMO143G0107 Selaginella moellendorffii HOM05D003285 ORTHO05D003740 1.3e-08 65.1 49 55.1
SEGI_11696 Sequoiadendron giganteum HOM05D003285 ORTHO05D003740 1.3e-08 65.1 38 71.1
unitig_90.g27504 Utricularia gibba HOM05D003285 ORTHO05D003740 1.3e-08 65.1 38 68.4
DCAR_026758 Daucus carota HOM05D003285 ORTHO05D003740 1.7e-08 64.7 38 68.4
FvH4_6g41470 Fragaria vesca HOM05D003285 ORTHO05D003740 1.7e-08 64.7 38 71.1
FAN02G2748 Fragaria x ananassa HOM05D003285 ORTHO05D003740 1.7e-08 64.7 38 71.1
FAN05G2811 Fragaria x ananassa HOM05D003285 ORTHO05D003740 1.7e-08 64.7 38 71.1
FAN05G5244 Fragaria x ananassa HOM05D003285 ORTHO05D003740 1.7e-08 64.7 38 71.1
FAN09G4844 Fragaria x ananassa HOM05D003285 ORTHO05D003740 1.7e-08 64.7 38 71.1
FAN14G1926 Fragaria x ananassa HOM05D003285 ORTHO05D000521 1.7e-08 64.7 38 71.1
Gohir.A12G118000 Gossypium hirsutum HOM05D003285 ORTHO05D003740 1.7e-08 64.7 38 71.1
Gohir.D12G121700 Gossypium hirsutum HOM05D003285 ORTHO05D003740 1.7e-08 64.7 38 71.1
Lj1g0024603 Lotus japonicus HOM05D003285 ORTHO05D003740 1.7e-08 64.7 38 71.1
Rhsim03G0217700 Rhododendron simsii HOM05D003285 ORTHO05D003740 1.7e-08 64.7 38 68.4
CANSAT21G0620 Cannabis sativa HOM05D003285 ORTHO05D003740 2.2e-08 64.3 70 45.7
Cc03_g11320 Coffea canephora HOM05D003285 ORTHO05D003740 2.2e-08 64.3 38 71.1
Gohir.A12G245200 Gossypium hirsutum HOM05D003285 ORTHO05D003740 2.2e-08 64.3 67 50.7
Gohir.D12G245950 Gossypium hirsutum HOM05D003285 ORTHO05D003740 2.2e-08 64.3 67 50.7
Gorai.008G132600 Gossypium raimondii HOM05D003285 ORTHO05D003740 2.2e-08 64.3 38 68.4
Gorai.008G263600 Gossypium raimondii HOM05D003285 ORTHO05D003740 2.2e-08 64.3 67 50.7
MD17G1110400 Malus domestica HOM05D003285 ORTHO05D003740 2.2e-08 64.3 81 44.4
Sopen12g015690 Solanum pennellii HOM05D003285 ORTHO05D003740 2.2e-08 64.3 38 71.1
VMungo1309G2970 Vigna mungo HOM05D003285 ORTHO05D003740 2.2e-08 64.3 38 68.4
Atru.chr5.808 Acer truncatum HOM05D003285 ORTHO05D003740 2.8e-08 63.9 38 71.1
BcaC04g24084 Brassica carinata HOM05D003285 ORTHO05D003740 2.8e-08 63.9 40 67.5
Carub.0006s3562 Capsella rubella HOM05D003285 ORTHO05D003740 2.8e-08 63.9 40 67.5
Duzib068G0147 Durio zibethinus HOM05D003285 ORTHO05D003740 2.8e-08 63.9 33 78.8
Medtr3g093240 Medicago truncatula HOM05D003285 ORTHO05D003740 2.8e-08 63.9 69 49.3
Phvul.009G039700 Phaseolus vulgaris HOM05D003285 ORTHO05D003740 2.8e-08 63.9 69 49.3
Psat5g070680 Pisum sativum HOM05D003285 ORTHO05D003740 2.8e-08 63.9 72 48.6
Prupe.3G204600 Prunus persica HOM05D003285 ORTHO05D003740 2.8e-08 63.9 79 44.3
THA.LOC104825916 Tarenaya hassleriana HOM05D003285 ORTHO05D003740 2.8e-08 63.9 65 47.7
BcaB01g02133 Brassica carinata HOM05D003285 ORTHO05D003740 3.7e-08 63.5 40 67.5
A09p01140 Brassica napus HOM05D003285 ORTHO05D003740 3.7e-08 63.5 40 67.5
C09p01220 Brassica napus HOM05D003285 ORTHO05D003740 3.7e-08 63.5 40 67.5
BolC9t53056H Brassica oleracea HOM05D003285 ORTHO05D003740 3.7e-08 63.5 40 67.5
BraA09t35785Z Brassica rapa HOM05D003285 ORTHO05D003740 3.7e-08 63.5 40 67.5
CSS0006312 Camellia sinensis var. sinensis HOM05D003285 ORTHO05D003740 3.7e-08 63.5 83 45.8
CiPaw.06G038900 Carya illinoinensis HOM05D003285 ORTHO05D003740 3.7e-08 63.5 38 71.1
CBR_g54989 Chara braunii HOM05D003285 ORTHO05D003740 3.7e-08 63.5 62 48.4
Gohir.A11G017000 Gossypium hirsutum HOM05D003285 ORTHO05D003740 3.7e-08 63.5 34 73.5
Lalb_Chr04g0252531 Lupinus albus HOM05D003285 ORTHO05D003740 3.7e-08 63.5 38 68.4
MBI12_g26902_MAGBIO Magnolia biondii HOM05D003285 ORTHO05D003740 3.7e-08 63.5 38 71.1
MD09G1119600 Malus domestica HOM05D003285 ORTHO05D003740 3.7e-08 63.5 81 43.2
Sp6g01490 Schrenkiella parvula HOM05D003285 ORTHO05D003740 3.7e-08 63.5 40 67.5
Aqoxy5G04377 Aquilegia oxysepala HOM05D003285 ORTHO05D003740 4.8e-08 63.2 38 68.4
CARHR250100 Cardamine hirsuta HOM05D003285 ORTHO05D003740 4.8e-08 63.2 40 67.5
COL.COLO4_14392 Corchorus olitorius HOM05D003285 ORTHO05D003740 4.8e-08 63.2 69 50.7
Thhalv10029452m.g Eutrema salsugineum HOM05D003285 ORTHO05D003740 4.8e-08 63.2 40 67.5
Prupe.2G321500 Prunus persica HOM05D003285 ORTHO05D003740 4.8e-08 63.2 38 68.4
Sc13g0010640 Simmondsia chinensis HOM05D003285 ORTHO05D003740 4.8e-08 63.2 38 68.4
CSS0001679 Camellia sinensis var. sinensis HOM05D003285 ORTHO05D003740 6.3e-08 62.8 38 68.4
Manes.07G094100 Manihot esculenta HOM05D003285 ORTHO05D003740 6.3e-08 62.8 38 68.4
PGSC0003DMG400004434 Solanum tuberosum HOM05D003285 ORTHO05D003740 6.3e-08 62.8 38 68.4
Thecc.01G330000 Theobroma cacao HOM05D003285 ORTHO05D003740 6.3e-08 62.8 38 68.4
TAR375G0298 Trochodendron aralioides HOM05D003285 ORTHO05D003740 6.3e-08 62.8 38 68.4
COL.COLO4_23077 Corchorus olitorius HOM05D003285 ORTHO05D003740 8.2e-08 62.4 38 68.4
HanXRQChr08g0225821 Helianthus annuus HOM05D003285 ORTHO05D003740 8.2e-08 62.4 38 65.8
Psat2g061520 Pisum sativum HOM05D003285 ORTHO05D003740 8.2e-08 62.4 68 48.5
Sed0005285 Sechium edule HOM05D003285 ORTHO05D003740 8.2e-08 62.4 36 72.2
AL6G51760 Arabidopsis lyrata HOM05D003285 ORTHO05D003740 1.1e-07 62.0 72 45.8
CAN.G34.17 Capsicum annuum HOM05D003285 ORTHO05D003740 1.1e-07 62.0 38 65.8
Duzib133G1556 Durio zibethinus HOM05D003285 ORTHO05D003740 1.1e-07 62.0 38 68.4
Lalb_Chr10g0103031 Lupinus albus HOM05D003285 ORTHO05D003740 1.1e-07 62.0 38 68.4
QL05p047742 Quercus lobata HOM05D003285 ORTHO05D003740 1.1e-07 62.0 33 78.8
TAR629G1225 Trochodendron aralioides HOM05D003285 ORTHO05D003740 1.1e-07 62.0 39 64.1
vmacro10170 Vaccinium macrocarpon HOM05D003285 ORTHO05D003740 1.1e-07 62.0 38 68.4
Ah.13g070960 Amaranthus hybridus HOM05D003285 ORTHO05D003740 1.4e-07 61.6 38 65.8
AT4G01575 Arabidopsis thaliana HOM05D003285 ORTHO05D003740 1.4e-07 61.6 40 65.0
Duzib138G1807 Durio zibethinus HOM05D003285 ORTHO05D003740 1.4e-07 61.6 38 68.4
FAN10G0895 Fragaria x ananassa HOM05D003285 ORTHO05D003740 1.4e-07 61.6 38 65.8
MD07G1302300 Malus domestica HOM05D003285 ORTHO05D003740 1.4e-07 61.6 38 65.8
Cfa016138 Carpinus fangiana HOM05D003285 ORTHO05D003740 1.8e-07 61.2 40 62.5
Dinv17284 Davidia involucrata HOM05D003285 ORTHO05D003740 1.8e-07 61.2 38 68.4
Migut.F00970 Erythranthe guttata HOM05D003285 ORTHO05D003740 1.8e-07 61.2 67 46.3
FvH4_7g33250 Fragaria vesca HOM05D003285 ORTHO05D003740 1.8e-07 61.2 38 65.8
FAN03G0131 Fragaria x ananassa HOM05D003285 ORTHO05D003740 1.8e-07 61.2 38 65.8
MD01G1231000 Malus domestica HOM05D003285 ORTHO05D003740 1.8e-07 61.2 38 65.8
Manes.01G237800 Manihot esculenta HOM05D003285 ORTHO05D003740 1.8e-07 61.2 38 65.8
Nitab4.5_0000327g0010 Nicotiana tabacum HOM05D003285 ORTHO05D003740 1.8e-07 61.2 38 68.4
Nitab4.5_0000921g0070 Nicotiana tabacum HOM05D003285 ORTHO05D003740 1.8e-07 61.2 38 68.4
Nitab4.5_0004582g0030 Nicotiana tabacum HOM05D003285 ORTHO05D003740 1.8e-07 61.2 38 65.8
RcHm_v2.0_Chr1g0383241 Rosa chinensis HOM05D003285 ORTHO05D003740 1.8e-07 61.2 38 65.8
SEGI_32649 Sequoiadendron giganteum HOM05D000281 ORTHO05D009440 1.8e-07 61.2 159 25.2
THA.LOC104801338 Tarenaya hassleriana HOM05D003285 ORTHO05D003740 1.8e-07 61.2 65 44.6
Oeu000711.1 Olea europaea HOM05D003285 ORTHO05D003740 2.4e-07 60.8 69 46.4
RcHm_v2.0_Chr2g0157141 Rosa chinensis HOM05D003285 ORTHO05D003740 2.4e-07 60.8 33 75.8
MSTRG.8551 Avicennia marina HOM05D003285 ORTHO05D003740 3.1e-07 60.5 38 65.8
CAN.G65.145 Capsicum annuum HOM05D003285 ORTHO05D003740 3.1e-07 60.5 88 39.8
Ca_16834_v3 Cicer arietinum L. HOM05D003285 ORTHO05D003740 3.1e-07 60.5 38 63.2
MBI05_g43774_MAGBIO Magnolia biondii HOM05D003285 ORTHO05D003740 3.1e-07 60.5 38 63.2
Oeu062810.1 Olea europaea HOM05D003285 ORTHO05D003740 3.1e-07 60.5 70 44.3
Sabra15G0001100 Salix brachista HOM05D003285 ORTHO05D003740 3.1e-07 60.5 37 64.9
SEGI_39138 Sequoiadendron giganteum HOM05D003285 ORTHO05D003740 3.1e-07 60.5 40 62.5
Lsat_1_v5_gn_2_135500 Lactuca sativa HOM05D003285 ORTHO05D003740 4.1e-07 60.1 65 44.6
Potri.015G001800 Populus trichocarpa HOM05D003285 ORTHO05D003740 4.1e-07 60.1 37 64.9
Solyc03g080040.1 Solanum lycopersicum HOM05D003285 ORTHO05D003740 4.1e-07 60.1 38 65.8
Sopen03g021760 Solanum pennellii HOM05D003285 ORTHO05D003740 4.1e-07 60.1 38 65.8
PGSC0003DMG400000552 Solanum tuberosum HOM05D003285 ORTHO05D003740 4.1e-07 60.1 38 65.8
PGSC0003DMG400027024 Solanum tuberosum HOM05D003285 ORTHO05D003740 4.1e-07 60.1 38 68.4
VMungo0860G0001 Vigna mungo HOM05D003285 ORTHO05D003740 4.1e-07 60.1 37 70.3
ATR0824G057 Amborella trichopoda HOM05D003285 ORTHO05D003740 5.3e-07 59.7 36 66.7
Ciclev10022908m.g Citrus clementina HOM05D003285 ORTHO05D003740 5.3e-07 59.7 38 65.8
FAN10G2316 Fragaria x ananassa HOM05D003285 ORTHO05D003740 5.3e-07 59.7 38 63.2
Pp3c4_11240 Physcomitrium patens HOM05D003285 ORTHO05D003740 5.3e-07 59.7 38 68.4
SEGI_34745 Sequoiadendron giganteum HOM05D000036 ORTHO05D000095 5.3e-07 59.7 191 24.1
Solyc06g073020.3 Solanum lycopersicum HOM05D003285 ORTHO05D003740 5.3e-07 59.7 38 68.4
Sopen06g029370 Solanum pennellii HOM05D003285 ORTHO05D003740 5.3e-07 59.7 38 68.4
Zm00001eb369200 Zea mays HOM05D003285 ORTHO05D003740 5.3e-07 59.7 40 60.0
ECA233G5428 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.0e-07 59.3 40 60.0
Gohir.A11G102600 Gossypium hirsutum HOM05D003285 ORTHO05D003740 7.0e-07 59.3 38 65.8
Lj1C1030T12 Lonicera japonica HOM05D003285 ORTHO05D003740 7.0e-07 59.3 40 60.0
Potri.014G108600 Populus trichocarpa HOM05D003285 ORTHO05D003740 7.0e-07 59.3 38 65.8
SalBow2G0415 Salvia bowleyana HOM05D003285 ORTHO05D003740 7.0e-07 59.3 38 63.2
SalBow4G0988 Salvia bowleyana HOM05D003285 ORTHO05D003740 7.0e-07 59.3 38 63.2
SalBow7G2502 Salvia bowleyana HOM05D003285 ORTHO05D003740 7.0e-07 59.3 38 63.2
CDE11G0266 Ceratophyllum demersum HOM05D003285 ORTHO05D003740 9.1e-07 58.9 38 63.2
Lalb_Chr08g0239451 Lupinus albus HOM05D003285 ORTHO05D003740 9.1e-07 58.9 38 63.2
ATR0620G008 Amborella trichopoda HOM05D003285 ORTHO05D003740 1.2e-06 58.5 38 63.2
CAN.G303.48 Capsicum annuum HOM05D003285 ORTHO05D003740 1.2e-06 58.5 38 63.2
MD07G1053300 Malus domestica HOM05D000036 ORTHO05D002265 1.2e-06 58.5 237 24.1
Gohir.A07G133000 Gossypium hirsutum HOM05D003285 ORTHO05D003740 1.6e-06 58.2 38 63.2
Gorai.001G149500 Gossypium raimondii HOM05D003285 ORTHO05D003740 1.6e-06 58.2 38 63.2
HPP92_015067 Vanilla planifolia HOM05D003285 ORTHO05D003740 1.6e-06 58.2 41 61.0
Ciclev10024059m.g Citrus clementina HOM05D003285 ORTHO05D003740 2.0e-06 57.8 38 60.5
Haze_00324 Corylus avellana HOM05D003285 ORTHO05D003740 2.0e-06 57.8 40 57.5
Gohir.D11G107100 Gossypium hirsutum HOM05D003285 ORTHO05D003740 2.0e-06 57.8 38 63.2
Gorai.007G114700 Gossypium raimondii HOM05D003285 ORTHO05D003740 2.0e-06 57.8 38 63.2
SalBow4G2464 Salvia bowleyana HOM05D003285 ORTHO05D003740 2.0e-06 57.8 68 42.6
SGA_v2.0_scaffold165G38207 Striga asiatica HOM05D003285 ORTHO05D003740 2.0e-06 57.8 68 41.2
Potri.002G182800 Populus trichocarpa HOM05D003285 ORTHO05D003740 3.5e-06 57.0 38 63.2
SEGI_39021 Sequoiadendron giganteum HOM05D000036 ORTHO05D000095 3.5e-06 57.0 193 25.9
Lsat_1_v5_gn_8_4021 Lactuca sativa HOM05D003285 ORTHO05D003740 4.5e-06 56.6 41 58.5
SalBow7G1786 Salvia bowleyana HOM05D003285 ORTHO05D003740 4.5e-06 56.6 68 41.2
Zm00001eb152730 Zea mays HOM05D003285 ORTHO05D003740 4.5e-06 56.6 33 66.7
Aa31LG10G15970 Aethionema arabicum HOM05D003285 ORTHO05D003740 5.9e-06 56.2 34 67.6
BcaC07g40695 Brassica carinata HOM05D003285 ORTHO05D003740 5.9e-06 56.2 37 62.2
BcaC07g42624 Brassica carinata HOM05D003285 ORTHO05D003740 5.9e-06 56.2 37 62.2
A09p54050 Brassica napus HOM05D003285 ORTHO05D003740 5.9e-06 56.2 37 62.2
C08p36940 Brassica napus HOM05D003285 ORTHO05D003740 5.9e-06 56.2 37 62.2
BolC8t51270H Brassica oleracea HOM05D003285 ORTHO05D003740 5.9e-06 56.2 37 62.2
BraA09t40819Z Brassica rapa HOM05D003285 ORTHO05D003740 5.9e-06 56.2 37 62.2
CARHR172340 Cardamine hirsuta HOM05D003285 ORTHO05D003740 5.9e-06 56.2 37 62.2
DCAR_009103 Daucus carota HOM05D003285 ORTHO05D003740 5.9e-06 56.2 34 67.6
Thhalv10006320m.g Eutrema salsugineum HOM05D003285 ORTHO05D003740 5.9e-06 56.2 37 62.2
THA.LOC104802105 Tarenaya hassleriana HOM05D003285 ORTHO05D003740 5.9e-06 56.2 37 62.2
AT3G61980 Arabidopsis thaliana HOM05D003285 ORTHO05D003740 7.7e-06 55.8 37 62.2
Carub.0005s2874 Capsella rubella HOM05D003285 ORTHO05D003740 7.7e-06 55.8 37 62.2
Gohir.D07G137400 Gossypium hirsutum HOM05D003285 ORTHO05D003740 7.7e-06 55.8 38 60.5
SEGI_29462 Sequoiadendron giganteum HOM05D000036 ORTHO05D000095 7.7e-06 55.8 238 21.8


User provided reference genes

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