Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_344.1379 Anthoceros agrestis HOM05D003532 ORTHO05D015853 2.3e-139 498.8 245 100.0
AagrBONN_evm.TU.Sc2ySwM_368.236 Anthoceros agrestis HOM05D003532 ORTHO05D015853 2.2e-89 332.8 197 84.3
AagrBONN_evm.TU.Sc2ySwM_368.264 Anthoceros agrestis HOM05D003532 ORTHO05D003298 8.8e-62 241.1 197 61.4
AagrBONN_evm.TU.Sc2ySwM_368.330 Anthoceros agrestis HOM05D002844 ORTHO05D003298 1.2e-61 240.7 197 60.9
AagrBONN_evm.TU.Sc2ySwM_117.4062 Anthoceros agrestis HOM05D003532 ORTHO05D015853 5.7e-61 238.4 196 59.7
AagrBONN_evm.TU.Sc2ySwM_368.290 Anthoceros agrestis HOM05D002844 ORTHO05D003298 2.8e-60 236.1 197 59.9
AagrBONN_evm.TU.Sc2ySwM_368.391 Anthoceros agrestis HOM05D002844 ORTHO05D015853 2.8e-60 236.1 197 58.9
AagrBONN_evm.TU.Sc2ySwM_362.1324 Anthoceros agrestis HOM05D002844 ORTHO05D003298 4.2e-56 222.2 180 61.7
AagrBONN_evm.TU.Sc2ySwM_344.5368 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.2e-45 187.6 150 62.7
AagrBONN_evm.TU.Sc2ySwM_368.322 Anthoceros agrestis HOM05D002844 ORTHO05D015853 1.3e-41 174.1 135 63.0
AagrBONN_evm.TU.Sc2ySwM_368.274 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.1e-31 140.2 93 69.9
AagrBONN_evm.TU.Sc2ySwM_362.2213 Anthoceros agrestis HOM05D021531 ORTHO05D015853 1.6e-26 124.0 191 36.1
AagrBONN_evm.TU.Sc2ySwM_362.1938 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.0e-25 119.8 188 38.8
AagrBONN_evm.TU.Sc2ySwM_362.556 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.6e-23 112.8 190 35.3
AagrBONN_evm.TU.Sc2ySwM_362.1677 Anthoceros agrestis HOM05D021531 ORTHO05D015853 8.1e-23 111.7 168 38.7
AagrBONN_evm.TU.Sc2ySwM_362.848 Anthoceros agrestis HOM05D002844 ORTHO05D071116 1.1e-19 101.3 115 47.8
Mapoly0072s0037 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.9e-19 100.5 188 31.9
AagrBONN_evm.TU.Sc2ySwM_362.1906 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.1e-19 99.4 88 48.9
Mapoly0002s0170 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.2e-18 97.8 208 31.2
AagrBONN_evm.TU.Sc2ySwM_362.2762 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.1e-18 97.1 192 35.9
AagrBONN_evm.TU.Sc2ySwM_344.717 Anthoceros agrestis HOM05D002844 ORTHO05D003298 3.5e-18 96.3 65 63.1
Mapoly0007s0136 Marchantia polymorpha HOM05D005435 ORTHO05D007370 3.5e-18 96.3 188 34.0
AagrBONN_evm.TU.Sc2ySwM_344.716 Anthoceros agrestis HOM05D002844 ORTHO05D071843 6.2e-15 85.5 95 47.4
Mapoly0182s0017 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.4e-14 84.3 192 28.1
AagrBONN_evm.TU.Sc2ySwM_368.1056 Anthoceros agrestis HOM05D003532 ORTHO05D003298 9.0e-14 81.6 188 30.9
Hund23137 Selenicereus undatus HOM05D003532 ORTHO05D003298 1.4e-11 74.3 192 30.7
THA.LOC104811650 Tarenaya hassleriana HOM05D003532 ORTHO05D003298 2.4e-11 73.6 192 29.2
GSVIVG01037769001 Vitis vinifera HOM05D003532 ORTHO05D003298 3.2e-11 73.2 191 31.9
MD03G1189500 Malus domestica HOM05D003532 ORTHO05D003298 5.4e-11 72.4 196 28.1
unitig_899.g15279 Utricularia gibba HOM05D003532 ORTHO05D003298 5.4e-11 72.4 189 28.0
Prupe.4G231800 Prunus persica HOM05D003532 ORTHO05D003298 1.2e-10 71.2 198 28.8
CiPaw.11G200200 Carya illinoinensis HOM05D003532 ORTHO05D003298 2.1e-10 70.5 202 28.2
Solyc03g112750.4 Solanum lycopersicum HOM05D003532 ORTHO05D003298 2.1e-10 70.5 192 27.1
Sopen03g031830 Solanum pennellii HOM05D003532 ORTHO05D003298 2.1e-10 70.5 192 27.1
CAN.G1166.12 Capsicum annuum HOM05D003532 ORTHO05D003298 3.5e-10 69.7 192 27.1
Duzib213G0377 Durio zibethinus HOM05D003532 ORTHO05D003298 3.5e-10 69.7 198 27.3
Eucgr.F00625 Eucalyptus grandis HOM05D003532 ORTHO05D003298 4.6e-10 69.3 195 27.2
Lsat_1_v5_gn_0_15220 Lactuca sativa HOM05D003532 ORTHO05D003298 4.6e-10 69.3 222 28.8
Mapoly0069s0085 Marchantia polymorpha HOM05D003532 ORTHO05D003298 4.6e-10 69.3 164 31.1
vmacro11564 Vaccinium macrocarpon HOM05D003532 ORTHO05D003298 4.6e-10 69.3 192 29.7
CANSAT11G0309 Cannabis sativa HOM05D003532 ORTHO05D003298 6.0e-10 68.9 227 28.2
Nitab4.5_0003218g0080 Nicotiana tabacum HOM05D003532 ORTHO05D003298 6.0e-10 68.9 192 26.6
Cfa020236 Carpinus fangiana HOM05D003532 ORTHO05D003298 7.8e-10 68.6 194 28.4
COL.COLO4_09777 Corchorus olitorius HOM05D003532 ORTHO05D003298 7.8e-10 68.6 199 28.1
Dinv10304 Davidia involucrata HOM05D003532 ORTHO05D003298 7.8e-10 68.6 196 27.6
Thecc.07G023400 Theobroma cacao HOM05D003532 ORTHO05D003298 1.0e-09 68.2 195 27.2
Nitab4.5_0002423g0060 Nicotiana tabacum HOM05D003532 ORTHO05D003298 1.3e-09 67.8 199 28.6
RcHm_v2.0_Chr5g0042451 Rosa chinensis HOM05D003532 ORTHO05D003298 1.3e-09 67.8 207 26.6
CSS0034495 Camellia sinensis var. sinensis HOM05D003532 ORTHO05D003298 1.7e-09 67.4 194 28.4
FvH4_3g23950 Fragaria vesca HOM05D003532 ORTHO05D003298 1.7e-09 67.4 94 37.2
FAN11G2286 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.7e-09 67.4 94 37.2
FAN21G0475 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.7e-09 67.4 94 37.2
Oeu019616.1 Olea europaea HOM05D003532 ORTHO05D003298 1.7e-09 67.4 191 27.2
PGR083G2272 Punica granatum HOM05D003532 ORTHO05D003298 1.7e-09 67.4 192 27.6
FAN25G2872 Fragaria x ananassa HOM05D003532 ORTHO05D003298 2.3e-09 67.0 94 37.2
FAN25G3696 Fragaria x ananassa HOM05D003532 ORTHO05D003298 2.3e-09 67.0 94 37.2
Cc05_g14600 Coffea canephora HOM05D003532 ORTHO05D003298 3.0e-09 66.6 195 28.2
Manes.15G064000 Manihot esculenta HOM05D003532 ORTHO05D003298 3.0e-09 66.6 199 27.1
Peaxi162Scf00568g00016 Petunia axillaris HOM05D003532 ORTHO05D003298 3.0e-09 66.6 201 26.9
QL08p005936 Quercus lobata HOM05D003532 ORTHO05D003298 3.0e-09 66.6 195 28.7
PGSC0003DMG400018160 Solanum tuberosum HOM05D003532 ORTHO05D003298 3.0e-09 66.6 198 27.8
Haze_09779 Corylus avellana HOM05D003532 ORTHO05D003298 3.9e-09 66.2 194 28.4
ECA240G1125 Erigeron canadensis HOM05D003532 ORTHO05D003298 3.9e-09 66.2 190 27.9
FAN16G2517 Fragaria x ananassa HOM05D003532 ORTHO05D003298 3.9e-09 66.2 94 37.2
Gohir.A01G086600 Gossypium hirsutum HOM05D003532 ORTHO05D003298 3.9e-09 66.2 198 26.8
Lj1P884T43 Lonicera japonica HOM05D003532 ORTHO05D003298 3.9e-09 66.2 196 27.6
Sabra16G0238200 Salix brachista HOM05D003532 ORTHO05D003298 3.9e-09 66.2 199 28.6
DCAR_016632 Daucus carota HOM05D003532 ORTHO05D003298 5.1e-09 65.9 94 38.3
Glyma.18G081800 Glycine max HOM05D003532 ORTHO05D003298 5.1e-09 65.9 192 26.0
Rhsim06G0226200 Rhododendron simsii HOM05D003532 ORTHO05D003298 5.1e-09 65.9 195 27.7
Sc07g0002980 Simmondsia chinensis HOM05D003532 ORTHO05D003298 5.1e-09 65.9 193 26.4
Glyma.08G325400 Glycine max HOM05D003532 ORTHO05D003298 6.6e-09 65.5 193 26.4
Potri.001G361200 Populus trichocarpa HOM05D003532 ORTHO05D003298 6.6e-09 65.5 199 27.1
Lj6g0018545 Lotus japonicus HOM05D003532 ORTHO05D003298 8.7e-09 65.1 191 26.2
TPR.G1921 Trifolium pratense HOM05D003532 ORTHO05D003298 8.7e-09 65.1 194 29.4
Gohir.D01G072800 Gossypium hirsutum HOM05D003532 ORTHO05D003298 1.1e-08 64.7 195 26.2
Gorai.002G095800 Gossypium raimondii HOM05D003532 ORTHO05D003298 1.1e-08 64.7 195 26.2
Lalb_Chr15g0081911 Lupinus albus HOM05D003532 ORTHO05D003298 1.1e-08 64.7 193 28.0
Ah.06g181150 Amaranthus hybridus HOM05D003532 ORTHO05D003298 1.5e-08 64.3 194 28.4
AagrBONN_evm.TU.Sc2ySwM_228.4443 Anthoceros agrestis HOM05D021531 ORTHO05D015853 1.9e-08 63.9 118 39.0
arahy.Tifrunner.gnm1.ann1.5HZ9E9 Arachis hypogaea HOM05D003532 ORTHO05D003298 1.9e-08 63.9 191 26.7
Sed0014342 Sechium edule HOM05D003532 ORTHO05D003298 1.9e-08 63.9 197 27.9
Cpa.g.sc12.202 Carica papaya HOM05D003532 ORTHO05D003298 2.5e-08 63.5 195 26.7
Phvul.006G052900 Phaseolus vulgaris HOM05D003532 ORTHO05D003298 2.5e-08 63.5 193 27.5
SGA_v2.0_scaffold171G38893 Striga asiatica HOM05D003532 ORTHO05D003298 2.5e-08 63.5 197 28.4
VMungo0540G1592 Vigna mungo HOM05D003532 ORTHO05D003298 2.5e-08 63.5 193 27.5
AUR62015940 Chenopodium quinoa HOM05D003532 ORTHO05D003298 4.3e-08 62.8 194 28.4
Ciclev10007256m.g Citrus clementina HOM05D003532 ORTHO05D003298 4.3e-08 62.8 197 25.9
Migut.M01683 Erythranthe guttata HOM05D003532 ORTHO05D003298 4.3e-08 62.8 193 25.4
TWI39G0358 Tripterygium wilfordii HOM05D003532 ORTHO05D003298 4.3e-08 62.8 205 27.8
Medtr3g055970 Medicago truncatula HOM05D003532 ORTHO05D003298 7.3e-08 62.0 193 25.9
Aqoxy1G04019 Aquilegia oxysepala HOM05D003532 ORTHO05D003298 9.6e-08 61.6 122 32.8
Ca_16739_v3 Cicer arietinum L. HOM05D003532 ORTHO05D003298 1.3e-07 61.2 193 25.9
TAR631G0007 Trochodendron aralioides HOM05D003532 ORTHO05D003298 1.3e-07 61.2 94 36.2
Zm00001eb057430 Zea mays HOM05D003532 ORTHO05D003298 1.6e-07 60.8 193 26.9
EL10Ac4g07624 Beta vulgaris HOM05D003532 ORTHO05D003298 2.8e-07 60.1 182 27.5
MELO3C024898.2 Cucumis melo HOM05D003532 ORTHO05D003298 2.8e-07 60.1 196 28.1
CsaV3_7G018660 Cucumis sativus L. HOM05D003532 ORTHO05D003298 2.8e-07 60.1 196 28.1
PSO210G6712 Papaver somniferum HOM05D003532 ORTHO05D003298 2.8e-07 60.1 200 26.0
ClCG09G021030 Citrullus lanatus HOM05D003532 ORTHO05D003298 4.8e-07 59.3 94 35.1
MBI19_g37319_MAGBIO Magnolia biondii HOM05D003532 ORTHO05D003298 6.2e-07 58.9 94 34.0
Psat5g171200 Pisum sativum HOM05D003532 ORTHO05D003298 8.1e-07 58.5 193 26.4
Nn1g07430 Nelumbo nucifera HOM05D003532 ORTHO05D003298 1.1e-06 58.2 79 39.2
HPP92_012225 Vanilla planifolia HOM05D003532 ORTHO05D003298 1.1e-06 58.2 94 36.2
AagrBONN_evm.TU.Sc2ySwM_362.2172 Anthoceros agrestis HOM05D021531 ORTHO05D015853 1.4e-06 57.8 119 35.3
SalBow8G0547 Salvia bowleyana HOM05D003532 ORTHO05D003298 1.4e-06 57.8 93 35.5
SHI26496 Sapria himalayana HOM05D003532 ORTHO05D003298 1.4e-06 57.8 94 36.2
Atru.chr2.3624 Acer truncatum HOM05D003532 ORTHO05D003298 1.8e-06 57.4 94 31.9
ATR0712G118 Amborella trichopoda HOM05D003532 ORTHO05D003298 1.8e-06 57.4 194 29.4
CBR_g38589 Chara braunii HOM05D003532 ORTHO05D003298 3.1e-06 56.6 198 27.8
Aa31LG3G11480 Aethionema arabicum HOM05D003532 ORTHO05D003298 5.3e-06 55.8 197 23.9
AagrBONN_evm.TU.Sc2ySwM_362.2175 Anthoceros agrestis HOM05D021531 ORTHO05D015853 6.9e-06 55.5 104 38.5
CBR_g12185 Chara braunii HOM05D003532 ORTHO05D003298 6.9e-06 55.5 197 25.9


User provided reference genes

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