Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 1.2e-194 682.9 340 100.0
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 4.2e-70 269.2 361 44.3
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.5e-64 250.8 320 45.3
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 5.1e-60 235.7 319 44.2
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 6.7e-60 235.3 340 40.9
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 1.3e-58 231.1 357 39.2
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 2.2e-58 230.3 350 38.9
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 9.1e-57 224.9 358 38.3
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 1.5e-56 224.2 290 46.9
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 3.5e-56 223.0 329 43.2
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 5.9e-56 222.2 357 37.0
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 7.7e-56 221.9 357 38.1
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 2.9e-55 219.9 344 40.4
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 5.0e-55 219.2 341 39.3
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 5.0e-55 219.2 368 37.2
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 8.5e-55 218.4 319 42.6
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 1.1e-54 218.0 361 39.3
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 1.5e-54 217.6 350 39.1
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.2e-54 216.5 354 38.7
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 4.2e-54 216.1 359 37.0
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 4.2e-54 216.1 360 36.9
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 4.2e-54 216.1 344 39.8
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 5.5e-54 215.7 333 40.8
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 1.2e-53 214.5 320 40.9
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 3.6e-53 213.0 332 38.3
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 8.0e-53 211.8 281 44.1
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 1.0e-52 211.5 365 37.8
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 1.4e-52 211.1 368 37.0
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 1.4e-52 211.1 361 38.0
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 1.8e-52 210.7 367 37.3
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 1.8e-52 210.7 358 37.2
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.3e-52 210.3 353 38.5
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.3e-52 210.3 358 38.3
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 3.0e-52 209.9 364 39.0
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 4.0e-52 209.5 359 37.6
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 4.0e-52 209.5 327 39.4
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 4.0e-52 209.5 356 39.0
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 5.2e-52 209.1 364 37.6
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 8.8e-52 208.4 379 38.3
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 1.1e-51 208.0 367 36.5
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 2.0e-51 207.2 349 38.4
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.6e-51 206.8 348 38.5
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 4.4e-51 206.1 359 35.7
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 5.7e-51 205.7 364 36.3
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 7.5e-51 205.3 287 43.6
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 1.3e-50 204.5 371 35.8
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 1.7e-50 204.1 332 39.2
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 2.2e-50 203.8 355 36.6
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 2.8e-50 203.4 351 38.5
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 3.7e-50 203.0 336 38.1
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 4.8e-50 202.6 348 37.9
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 8.2e-50 201.8 351 38.5
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 8.2e-50 201.8 365 37.3
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 8.2e-50 201.8 331 37.8
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 1.8e-49 200.7 371 37.7
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 2.4e-49 200.3 313 42.8
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 4.1e-49 199.5 303 40.3
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 5.3e-49 199.1 304 42.1
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 5.3e-49 199.1 304 42.1
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 5.3e-49 199.1 330 40.3
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 1.2e-48 198.0 317 39.7
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 1.2e-48 198.0 359 37.9
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 1.6e-48 197.6 331 37.5
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 2.0e-48 197.2 304 41.8
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 2.0e-48 197.2 366 38.5
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 5.9e-48 195.7 303 42.2
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 5.9e-48 195.7 312 38.8
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 5.9e-48 195.7 357 35.3
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 1.3e-47 194.5 303 42.6
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 2.2e-47 193.7 338 38.2
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 2.9e-47 193.4 363 35.8
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 6.5e-47 192.2 363 35.3
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 8.5e-47 191.8 337 37.4
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 1.9e-46 190.7 337 36.8
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 1.9e-46 190.7 335 37.0
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 3.2e-46 189.9 301 39.9
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 7.2e-46 188.7 311 37.6
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 2.1e-45 187.2 321 39.9
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 4.7e-45 186.0 328 37.8
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 1.4e-44 184.5 280 39.3
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 1.8e-44 184.1 302 37.1
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 1.2e-43 181.4 313 38.7
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 2.6e-43 180.3 316 39.9
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 4.4e-43 179.5 356 36.8
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 5.7e-43 179.1 244 42.6
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 2.2e-42 177.2 321 39.3
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 6.3e-42 175.6 329 37.1
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 3.1e-41 173.3 374 35.0
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 4.1e-41 172.9 274 38.0
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 5.4e-41 172.6 295 38.3
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 4.5e-40 169.5 220 44.1
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 2.5e-38 163.7 207 44.9
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 2.7e-37 160.2 337 36.2
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 5.2e-36 156.0 268 38.4
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 2.6e-35 153.7 279 37.3
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 8.3e-34 148.7 244 42.2
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 4.1e-33 146.4 277 36.1
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 7.0e-33 145.6 274 37.2
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 7.7e-32 142.1 419 30.1
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 3.8e-31 139.8 183 44.8
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 6.1e-29 132.5 266 37.6
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 1.0e-28 131.7 132 50.8
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 8.9e-28 128.6 312 31.4
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 7.5e-27 125.6 225 37.8
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 1.3e-23 114.8 205 39.5
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 3.3e-22 110.2 298 32.6
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.2e-21 108.2 209 35.9
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.0e-20 105.1 167 42.5
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 7.0e-17 92.4 271 31.7
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 3.0e-15 87.0 94 44.7
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 8.6e-15 85.5 109 43.1
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 1.9e-14 84.3 192 30.7
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 3.3e-14 83.6 191 33.0
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 4.3e-14 83.2 117 37.6
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 8.9e-12 75.5 341 28.7
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 6.4e-10 69.3 156 33.3
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 8.3e-10 68.9 187 31.0
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 4.1e-09 66.6 75 45.3
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.3e-07 60.8 218 30.3
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 3.0e-07 60.5 105 32.4
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 3.0e-07 60.5 53 49.1
Cre01.g033763 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 6.6e-07 59.3 60 48.3


User provided reference genes

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