Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_117.1738 Anthoceros agrestis HOM05D004914 ORTHO05D038447 2.0e-62 242.3 121 100.0
AagrBONN_evm.TU.Sc2ySwM_344.881 Anthoceros agrestis HOM05D004914 ORTHO05D006512 2.9e-42 175.3 101 86.1
HanXRQChr13g0411091 Helianthus annuus HOM05D004914 ORTHO05D006512 1.2e-32 143.3 101 69.3
SMO134G0146 Selaginella moellendorffii HOM05D004914 ORTHO05D006512 1.2e-32 143.3 101 69.3
Nn3g19257 Nelumbo nucifera HOM05D004914 ORTHO05D006512 4.7e-32 141.4 101 68.3
CSS0043328 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 6.1e-32 141.0 101 66.3
CSS0049486 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 8.0e-32 140.6 101 66.3
CSS0032490 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.8e-31 139.4 101 65.3
Lj8C331T9 Lonicera japonica HOM05D004914 ORTHO05D006512 1.8e-31 139.4 101 67.3
CSS0040630 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.3e-31 139.0 101 65.3
CSS0048600 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.3e-31 139.0 106 64.2
CSS0023780 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 3.0e-31 138.7 101 65.3
MD06G1017300 Malus domestica HOM05D004914 ORTHO05D006512 3.0e-31 138.7 101 66.3
Sabra03G0071100 Salix brachista HOM05D004914 ORTHO05D006512 3.0e-31 138.7 101 65.3
TWI12G0750 Tripterygium wilfordii HOM05D004914 ORTHO05D006512 3.0e-31 138.7 101 65.3
Aqoxy7G00885 Aquilegia oxysepala HOM05D004914 ORTHO05D006512 4.0e-31 138.3 101 65.3
FvH4_5g24140 Fragaria vesca HOM05D004914 ORTHO05D006512 4.0e-31 138.3 101 66.3
FAN18G4324 Fragaria x ananassa HOM05D004914 ORTHO05D006512 4.0e-31 138.3 101 66.3
Mapoly0022s0194 Marchantia polymorpha HOM05D004914 ORTHO05D006512 4.0e-31 138.3 101 64.4
Mapoly0244s0005 Marchantia polymorpha HOM05D004914 ORTHO05D006512 4.0e-31 138.3 101 64.4
Prupe.5G019100 Prunus persica HOM05D004914 ORTHO05D006512 4.0e-31 138.3 101 64.4
A09p21740 Brassica napus HOM05D004914 ORTHO05D006512 5.2e-31 137.9 101 64.4
BraA09t37776Z Brassica rapa HOM05D004914 ORTHO05D006512 5.2e-31 137.9 101 64.4
ECA240G3397 Erigeron canadensis HOM05D004914 ORTHO05D006512 5.2e-31 137.9 101 65.3
Manes.17G007000 Manihot esculenta HOM05D004914 ORTHO05D006512 5.2e-31 137.9 101 66.3
TPR.G17253 Trifolium pratense HOM05D004914 ORTHO05D006512 5.2e-31 137.9 101 66.3
TAR375G1103 Trochodendron aralioides HOM05D004914 ORTHO05D006512 5.2e-31 137.9 101 66.3
HPP92_015125 Vanilla planifolia HOM05D004914 ORTHO05D006512 5.2e-31 137.9 101 67.3
Atru.chr6.2105 Acer truncatum HOM05D004914 ORTHO05D006512 6.8e-31 137.5 101 65.3
CARHR176690 Cardamine hirsuta HOM05D004914 ORTHO05D006512 6.8e-31 137.5 101 63.4
ClCG10G000930 Citrullus lanatus HOM05D004914 ORTHO05D006512 6.8e-31 137.5 101 65.3
PGR042G1968 Punica granatum HOM05D004914 ORTHO05D006512 6.8e-31 137.5 101 66.3
Sed0010004 Sechium edule HOM05D004914 ORTHO05D006512 6.8e-31 137.5 101 66.3
SEGI_28013 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 6.8e-31 137.5 101 65.3
BcaB07g30888 Brassica carinata HOM05D004914 ORTHO05D006512 8.9e-31 137.1 101 63.4
Lsat_1_v5_gn_5_55660 Lactuca sativa HOM05D004914 ORTHO05D006512 8.9e-31 137.1 101 66.3
AUR62027313 Chenopodium quinoa HOM05D004914 ORTHO05D006512 1.2e-30 136.7 101 65.3
MELO3C013790.2 Cucumis melo HOM05D004914 ORTHO05D006512 1.2e-30 136.7 101 66.3
Lalb_Chr05g0215361 Lupinus albus HOM05D004914 ORTHO05D006512 1.2e-30 136.7 101 64.4
Thecc.03G324700 Theobroma cacao HOM05D004914 ORTHO05D006512 1.2e-30 136.7 101 65.3
FAN13G2505 Fragaria x ananassa HOM05D004914 ORTHO05D006512 1.5e-30 136.3 101 66.3
QL12p001913 Quercus lobata HOM05D004914 ORTHO05D006512 1.5e-30 136.3 101 61.4
RcHm_v2.0_Chr7g0213721 Rosa chinensis HOM05D004914 ORTHO05D006512 1.5e-30 136.3 101 65.3
SEGI_09515 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 1.5e-30 136.3 101 65.3
BcaC04g21765 Brassica carinata HOM05D004914 ORTHO05D006512 2.0e-30 136.0 101 63.4
C09p27840 Brassica napus HOM05D004914 ORTHO05D006512 2.0e-30 136.0 101 63.4
BolC9t55648H Brassica oleracea HOM05D004914 ORTHO05D006512 2.0e-30 136.0 101 63.4
CiPaw.13G121600 Carya illinoinensis HOM05D004914 ORTHO05D006512 2.0e-30 136.0 101 64.4
CsaV3_3G001000 Cucumis sativus L. HOM05D004914 ORTHO05D006512 2.0e-30 136.0 101 64.4
FAN04G0884 Fragaria x ananassa HOM05D004914 ORTHO05D006512 2.0e-30 136.0 101 65.3
Actinidia01258 Actinidia chinensis HOM05D004914 ORTHO05D006512 2.6e-30 135.6 101 63.4
AUR62007419 Chenopodium quinoa HOM05D004914 ORTHO05D006512 2.6e-30 135.6 101 64.4
Ca_25087_v3 Cicer arietinum L. HOM05D004914 ORTHO05D006512 2.6e-30 135.6 101 64.4
Oeu046797.1 Olea europaea HOM05D004914 ORTHO05D006512 2.6e-30 135.6 101 65.3
Psat2g142640 Pisum sativum HOM05D004914 ORTHO05D006512 2.6e-30 135.6 101 64.4
Dinv37416 Davidia involucrata HOM05D004914 ORTHO05D006512 3.4e-30 135.2 101 63.4
Medtr5g026640 Medicago truncatula HOM05D004914 ORTHO05D006512 3.4e-30 135.2 101 65.3
QL12p001923 Quercus lobata HOM05D004914 ORTHO05D006512 3.4e-30 135.2 101 60.4
arahy.Tifrunner.gnm1.ann1.AE6EEZ Arachis hypogaea HOM05D004914 ORTHO05D006512 4.4e-30 134.8 101 63.4
arahy.Tifrunner.gnm1.ann1.Q0IN0Q Arachis hypogaea HOM05D004914 ORTHO05D006512 4.4e-30 134.8 101 63.4
Duzib205G0746 Durio zibethinus HOM05D004914 ORTHO05D006512 4.4e-30 134.8 101 65.3
Lj2g0015407 Lotus japonicus HOM05D004914 ORTHO05D006512 4.4e-30 134.8 101 63.4
Thhalv10000803m.g Eutrema salsugineum HOM05D004914 ORTHO05D006512 5.7e-30 134.4 91 67.0
vmacro00075 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 5.7e-30 134.4 101 63.4
Glyma.04G123700 Glycine max HOM05D004914 ORTHO05D006512 7.5e-30 134.0 101 63.4
Rhsim11G0034500 Rhododendron simsii HOM05D004914 ORTHO05D006512 7.5e-30 134.0 101 62.4
RcHm_v2.0_Chr7g0213811 Rosa chinensis HOM05D004914 ORTHO05D006512 7.5e-30 134.0 101 65.3
Sp2g10330 Schrenkiella parvula HOM05D004914 ORTHO05D006512 7.5e-30 134.0 102 59.8
CANSAT35G0949 Cannabis sativa HOM05D004914 ORTHO05D006512 9.8e-30 133.7 101 62.4
Carub.0008s0273 Capsella rubella HOM05D004914 ORTHO05D006512 9.8e-30 133.7 101 62.4
SEGI_38788 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 9.8e-30 133.7 101 64.4
ATR0829G119 Amborella trichopoda HOM05D004914 ORTHO05D006512 1.3e-29 133.3 101 63.4
MSTRG.25735 Avicennia marina HOM05D004914 ORTHO05D006512 1.3e-29 133.3 101 65.3
Ciclev10000444m.g Citrus clementina HOM05D004914 ORTHO05D006512 1.3e-29 133.3 101 62.4
AL8G13420 Arabidopsis lyrata HOM05D004914 ORTHO05D006512 1.7e-29 132.9 101 61.4
CAN.G1731.1 Capsicum annuum HOM05D004914 ORTHO05D006512 1.7e-29 132.9 101 64.4
Eucgr.E01216 Eucalyptus grandis HOM05D004914 ORTHO05D006512 1.7e-29 132.9 101 65.3
PSO717G0130 Papaver somniferum HOM05D004914 ORTHO05D006512 1.7e-29 132.9 101 64.4
Pp3c1_21890 Physcomitrium patens HOM05D004914 ORTHO05D006512 1.7e-29 132.9 101 65.3
Potri.003G104000 Populus trichocarpa HOM05D004914 ORTHO05D006512 1.7e-29 132.9 101 61.4
CDE12G0485 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 2.2e-29 132.5 102 62.7
VMungo1215G3133 Vigna mungo HOM05D004914 ORTHO05D006512 2.2e-29 132.5 101 62.4
Cc08_g05310 Coffea canephora HOM05D004914 ORTHO05D006512 2.9e-29 132.1 101 62.4
Aa31LG9G7630 Aethionema arabicum HOM05D004914 ORTHO05D006512 3.7e-29 131.7 101 61.4
Pp3c14_7160 Physcomitrium patens HOM05D004914 ORTHO05D006512 3.7e-29 131.7 101 64.4
Phvul.002G127200 Phaseolus vulgaris HOM05D004914 ORTHO05D006512 4.9e-29 131.3 101 62.4
RcHm_v2.0_Chr4g0401421 Rosa chinensis HOM05D004914 ORTHO05D006512 4.9e-29 131.3 92 67.4
GSVIVG01022810001 Vitis vinifera HOM05D004914 ORTHO05D006512 4.9e-29 131.3 101 63.4
Eucgr.E01217 Eucalyptus grandis HOM05D004914 ORTHO05D006512 8.3e-29 130.6 101 63.4
Os10g0580400 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D006512 8.3e-29 130.6 101 63.4
Nn1g02045 Nelumbo nucifera HOM05D004914 ORTHO05D006512 1.1e-28 130.2 101 63.4
RcHm_v2.0_Chr4g0401521 Rosa chinensis HOM05D004914 ORTHO05D006512 1.1e-28 130.2 92 66.3
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 1.4e-28 129.8 101 63.4
DCAR_006313 Daucus carota HOM05D004914 ORTHO05D006512 1.4e-28 129.8 103 61.2
SalBow4G0569 Salvia bowleyana HOM05D004914 ORTHO05D006512 1.4e-28 129.8 101 63.4
PGSC0003DMG401007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 1.4e-28 129.8 101 62.4
SGA_v2.0_scaffold96G29079 Striga asiatica HOM05D004914 ORTHO05D006512 1.4e-28 129.8 101 62.4
Nitab4.5_0016045g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 1.8e-28 129.4 101 63.4
Zm00001eb279810 Zea mays HOM05D004914 ORTHO05D006512 1.8e-28 129.4 101 63.4
Solyc08g075570.4 Solanum lycopersicum HOM05D004914 ORTHO05D006512 4.1e-28 128.3 101 61.4
AT5G45380 Arabidopsis thaliana HOM05D004914 ORTHO05D006512 5.4e-28 127.9 101 59.4
Gorai.005G228700 Gossypium raimondii HOM05D004914 ORTHO05D006512 5.4e-28 127.9 101 60.4
Peaxi162Scf00053g00525 Petunia axillaris HOM05D004914 ORTHO05D006512 5.4e-28 127.9 101 62.4
BcaB07g30458 Brassica carinata HOM05D004914 ORTHO05D006512 9.2e-28 127.1 101 59.4
Eucgr.E01215 Eucalyptus grandis HOM05D004914 ORTHO05D006512 9.2e-28 127.1 88 69.3
Gohir.A03G179800 Gossypium hirsutum HOM05D004914 ORTHO05D006512 1.6e-27 126.3 101 59.4
Gohir.D02G202952 Gossypium hirsutum HOM05D004914 ORTHO05D006512 1.6e-27 126.3 101 59.4
Sopen08g024250 Solanum pennellii HOM05D004914 ORTHO05D006512 1.6e-27 126.3 101 60.4
unitig_92.g28131 Utricularia gibba HOM05D004914 ORTHO05D006512 4.6e-27 124.8 101 61.4
A02p29100 Brassica napus HOM05D004914 ORTHO05D006512 7.8e-27 124.0 101 58.4
BcaC03g16746 Brassica carinata HOM05D004914 ORTHO05D006512 1.0e-26 123.6 101 58.4
C02p46180 Brassica napus HOM05D004914 ORTHO05D006512 1.0e-26 123.6 101 58.4
BolC2t10674H Brassica oleracea HOM05D004914 ORTHO05D006512 1.0e-26 123.6 101 58.4
BraA02t07943Z Brassica rapa HOM05D004914 ORTHO05D006512 1.0e-26 123.6 101 58.4
CSS0001315 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 5.6e-25 117.9 101 58.4
EL10Ac5g11909 Beta vulgaris HOM05D004914 ORTHO05D006512 9.5e-25 117.1 77 70.1
Migut.A00542 Erythranthe guttata HOM05D004914 ORTHO05D006512 1.2e-24 116.7 101 58.4
CSS0040069 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.2e-22 110.2 94 58.5
CSS0015562 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 7.5e-22 107.5 90 62.2
Nitab4.5_0011552g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 2.2e-21 105.9 85 62.4
Os02g0689066 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D038447 1.8e-15 86.3 57 70.2
CSS0006727 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 4.0e-15 85.1 60 65.0
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 1.5e-14 83.2 94 45.7
MCO16G134 Micromonas commoda HOM05D004914 ORTHO05D006512 2.6e-14 82.4 105 45.7
Cre08.g360200 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 9.2e-12 73.9 90 45.6
Cre08.g360250 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 3.5e-11 72.0 90 44.4
Cre17.g703800 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 1.7e-10 69.7 90 41.1
vmacro00050 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 3.3e-09 65.5 96 38.5
Mapoly0006s0303 Marchantia polymorpha HOM05D004914 ORTHO05D006512 5.2e-07 58.2 101 35.6
AagrBONN_evm.TU.Sc2ySwM_228.2053 Anthoceros agrestis HOM05D004914 ORTHO05D006512 8.9e-07 57.4 103 35.9


User provided reference genes

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