Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 1.4e-272 942.6 545 100.0
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 2.5e-226 788.9 451 87.1
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 3.7e-225 785.0 451 87.4
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 8.1e-225 783.9 451 86.0
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 1.8e-224 782.7 452 86.1
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 4.0e-224 781.6 451 86.5
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 2.0e-223 779.2 452 85.6
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 2.0e-223 779.2 452 85.6
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 4.5e-223 778.1 425 90.4
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 4.5e-223 778.1 452 85.6
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 1.3e-222 776.5 432 88.7
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 2.9e-222 775.4 425 89.9
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 1.1e-218 763.5 452 84.5
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 2.1e-217 759.2 447 85.5
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 3.4e-215 751.9 424 88.2
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 3.4e-207 725.3 427 85.9
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 7.6e-207 724.2 429 83.4
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 1.8e-200 703.0 471 73.9
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 5.9e-199 698.0 449 77.1
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 3.8e-198 695.3 449 76.2
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 4.2e-197 691.8 449 76.2
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 4.2e-197 691.8 449 76.2
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 2.7e-196 689.1 446 76.0
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 4.7e-196 688.3 449 75.9
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 7.9e-196 687.6 420 79.8
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 1.0e-195 687.2 429 78.6
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 2.3e-195 686.0 420 79.8
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 8.8e-195 684.1 430 78.8
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 1.1e-194 683.7 433 77.8
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 2.6e-194 682.6 427 78.5
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 4.4e-194 681.8 438 77.6
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 5.7e-194 681.4 429 78.1
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 2.2e-193 679.5 450 74.9
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 8.2e-193 677.6 420 79.3
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 1.1e-192 677.2 420 79.3
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.1e-192 677.2 445 75.5
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.1e-192 677.2 438 76.7
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 2.4e-192 676.0 423 77.8
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 9.1e-192 674.1 425 77.9
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 1.5e-191 673.3 432 76.6
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 2.0e-191 672.9 438 76.9
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 2.0e-191 672.9 464 72.8
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 4.5e-191 671.8 432 76.6
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 5.9e-191 671.4 435 75.2
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 1.3e-190 670.2 436 75.5
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.7e-190 669.8 431 77.0
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 1.7e-190 669.8 433 75.8
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 3.8e-190 668.7 426 77.0
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 3.8e-190 668.7 453 75.5
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 6.5e-190 667.9 437 76.0
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 8.5e-190 667.5 431 75.9
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 2.5e-189 666.0 427 78.0
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 2.5e-189 666.0 433 76.9
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 2.5e-189 666.0 431 77.5
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 4.2e-189 665.2 417 77.5
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 4.2e-189 665.2 431 75.9
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 9.4e-189 664.1 449 75.3
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 2.1e-188 662.9 441 73.2
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 3.6e-188 662.1 419 76.8
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 3.6e-188 662.1 420 77.4
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 1.0e-187 660.6 435 73.8
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 1.4e-187 660.2 427 75.6
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 1.8e-187 659.8 434 75.1
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 8.8e-187 657.5 441 74.1
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 1.1e-186 657.1 419 77.3
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 2.0e-186 656.4 435 75.2
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.6e-186 656.0 419 77.1
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 2.6e-186 656.0 419 74.7
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 2.8e-185 652.5 424 76.4
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 1.4e-184 650.2 419 76.1
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 5.3e-184 648.3 421 75.8
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 1.2e-183 647.1 476 69.3
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 1.2e-183 647.1 450 72.7
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.6e-183 646.7 430 73.5
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 2.6e-183 646.0 466 70.2
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 4.5e-183 645.2 419 76.4
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 5.9e-183 644.8 417 76.7
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 1.1e-181 640.6 454 72.0
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 1.5e-181 640.2 417 76.0
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 2.5e-181 639.4 419 75.9
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 2.7e-180 636.0 416 76.0
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 1.8e-179 633.3 417 76.0
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 4.0e-179 632.1 433 74.4
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 5.2e-179 631.7 426 73.0
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 8.8e-179 630.9 448 71.0
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 1.2e-178 630.6 433 73.4
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 1.5e-178 630.2 455 70.8
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 5.7e-178 628.2 472 67.8
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 1.7e-177 626.7 453 70.0
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 1.1e-176 624.0 433 72.1
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 1.1e-176 624.0 420 73.1
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 9.1e-176 620.9 449 70.2
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 2.7e-175 619.4 425 72.7
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 6.5e-174 614.8 433 71.4
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 4.4e-170 602.1 419 72.1
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.4e-168 597.0 441 70.3
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 8.6e-166 587.8 421 71.3
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 7.2e-165 584.7 421 71.0
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 3.4e-162 575.9 416 70.4
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 1.0e-158 564.3 397 69.8
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 1.5e-157 560.5 418 68.4
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 1.5e-157 560.5 398 69.6
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 2.8e-156 556.2 432 67.1
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 3.0e-155 552.7 445 64.0
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 4.0e-155 552.4 341 78.9
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 6.8e-155 551.6 397 70.3
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 6.8e-155 551.6 433 64.2
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 8.9e-155 551.2 427 66.5
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 2.6e-154 549.7 427 66.3
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 7.5e-154 548.1 369 73.7
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 4.9e-153 545.4 429 66.7
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 5.4e-152 542.0 395 70.6
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 9.5e-149 531.2 350 73.4
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 1.1e-147 527.7 342 76.9
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 1.3e-145 520.8 352 74.4
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 1.9e-144 516.9 454 60.1
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 1.7e-142 510.4 423 61.9
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 5.0e-142 508.8 423 61.7
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 1.5e-141 507.3 356 71.3
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 9.9e-138 494.6 402 62.9
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 2.8e-132 476.5 415 60.5
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 1.7e-129 467.2 350 67.1
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 3.8e-129 466.1 433 57.7
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 1.0e-126 458.0 373 64.6
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 5.6e-125 452.2 379 60.9
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 9.6e-125 451.4 402 60.7
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 6.2e-124 448.7 425 58.4
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 2.4e-123 446.8 339 67.0
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 9.9e-122 441.4 390 56.7
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 5.4e-120 435.6 497 50.7
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 1.6e-119 434.1 362 62.2
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 1.3e-118 431.0 438 52.1
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 5.6e-117 425.6 438 52.7
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 1.6e-111 407.5 412 52.2
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 3.5e-111 406.4 433 53.8
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 9.6e-109 398.3 414 55.8
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 1.3e-105 387.9 609 39.6
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 3.3e-101 373.2 345 56.2
RcHm_v2.0_Chr5g0063241 Rosa chinensis HOM05D003858 ORTHO05D005878 1.7e-97 360.9 449 47.9
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 5.5e-96 355.9 438 48.2
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 1.0e-94 351.7 289 62.3
PSO063G1302 Papaver somniferum HOM05D003858 ORTHO05D005878 1.3e-94 351.3 282 64.2
Zm00001eb256780 Zea mays HOM05D003858 ORTHO05D005878 6.3e-92 342.4 256 69.5
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 1.5e-90 337.8 295 59.3
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 2.8e-84 317.0 378 44.4
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 8.2e-84 315.5 426 44.4
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 1.7e-81 307.8 468 40.6
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.5e-77 294.7 332 48.2
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 3.0e-70 270.4 207 66.2
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 3.0e-70 270.4 366 46.7
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 6.5e-65 252.7 156 77.6
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 5.2e-62 243.0 151 79.5
Actinidia36804 Actinidia chinensis HOM05D003858 ORTHO05D005878 1.8e-46 191.4 293 43.0
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 4.1e-35 153.7 98 72.4
C08p38970 Brassica napus HOM05D003858 ORTHO05D033539 1.6e-31 141.7 149 60.4
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 8.9e-30 136.0 105 63.8
BolC8t51470H Brassica oleracea HOM05D003858 ORTHO05D015239 2.9e-28 131.0 121 58.7
BolC8t51471H Brassica oleracea HOM05D003858 ORTHO05D033539 5.4e-27 126.7 149 57.0
FAN08G1067 Fragaria x ananassa HOM05D003858 ORTHO05D015239 8.6e-25 119.4 196 40.3
Medtr6g024025 Medicago truncatula HOM05D003858 ORTHO05D267118 1.1e-24 119.0 106 57.5
Zm00001eb256800 Zea mays HOM05D003858 ORTHO05D033539 7.3e-24 116.3 131 52.7
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.2e-22 110.2 93 62.4
FAN08G1033 Fragaria x ananassa HOM05D003858 ORTHO05D005878 3.4e-21 107.5 70 71.4
PSO675G5360 Papaver somniferum HOM05D003858 ORTHO05D015239 2.9e-20 104.4 99 59.6
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 7.1e-19 99.8 141 42.6
CBR_g61468 Chara braunii HOM05D003858 ORTHO05D131775 4.3e-16 90.5 128 46.9
FvH4_5g25261 Fragaria vesca HOM05D003858 ORTHO05D015239 7.3e-16 89.7 69 65.2
BcaC07g40899 Brassica carinata HOM05D003858 ORTHO05D015239 2.1e-15 88.2 95 52.6
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 2.1e-15 88.2 45 88.9
COL.COLO4_09285 Corchorus olitorius HOM05D003858 ORTHO05D155188 3.1e-14 84.3 48 81.2
HanXRQChr13g0426321 Helianthus annuus HOM05D003858 ORTHO05D000008 3.4e-13 80.9 66 57.6
FAN21G1362 Fragaria x ananassa HOM05D003858 ORTHO05D207154 1.7e-12 78.6 184 30.4
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 1.2e-10 72.4 211 28.0
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 2.7e-10 71.2 199 25.6
Zm00001eb256810 Zea mays HOM05D003858 ORTHO05D005878 7.8e-10 69.7 84 42.9
DCAR_007996 Daucus carota HOM05D003858 ORTHO05D176634 8.7e-09 66.2 51 58.8
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 8.7e-09 66.2 203 23.6
Nitab4.5_0002686g0020 Nicotiana tabacum HOM05D004480 ORTHO05D005546 3.3e-08 64.3 210 28.6
Nn7g35785 Nelumbo nucifera HOM05D004480 ORTHO05D005546 7.3e-08 63.2 199 23.6
ECA247G3834 Erigeron canadensis HOM05D000031 ORTHO05D000030 9.6e-08 62.8 55 56.4
Sabra17G0005500 Salix brachista HOM05D000001 ORTHO05D005546 9.6e-08 62.8 203 23.2
ECA247G3860 Erigeron canadensis HOM05D000031 ORTHO05D000030 2.8e-07 61.2 68 50.0


User provided reference genes

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