Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 4.8e-94 347.8 176 100.0
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 1.7e-46 189.9 110 85.5
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 1.9e-45 186.4 110 84.5
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 7.0e-45 184.5 110 84.5
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 9.2e-45 184.1 110 83.6
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 9.2e-45 184.1 110 83.6
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 6.0e-44 181.4 110 82.7
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 7.8e-44 181.0 112 81.2
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 8.6e-43 177.6 111 82.9
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 8.6e-43 177.6 111 82.9
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 8.6e-43 177.6 111 82.9
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 8.9e-40 167.5 110 79.1
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 7.5e-39 164.5 109 78.9
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 7.5e-39 164.5 109 78.9
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 8.6e-35 151.0 119 64.7
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 2.5e-34 149.4 116 63.8
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 4.3e-34 148.7 119 63.0
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 1.2e-33 147.1 111 65.8
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.8e-33 146.0 119 62.2
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 4.7e-33 145.2 119 62.2
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 1.1e-32 144.1 111 63.1
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 1.4e-32 143.7 119 62.2
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 1.4e-32 143.7 114 61.4
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 3.1e-32 142.5 112 63.4
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 4.0e-32 142.1 111 62.2
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 6.8e-32 141.4 115 59.1
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 3.4e-31 139.0 111 62.2
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 3.4e-31 139.0 111 60.4
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 4.4e-31 138.7 114 59.6
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 5.8e-31 138.3 86 80.2
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 7.6e-31 137.9 111 60.4
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 7.6e-31 137.9 111 61.3
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 7.6e-31 137.9 115 59.1
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 9.9e-31 137.5 111 62.2
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.3e-30 137.1 110 59.1
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 1.3e-30 137.1 110 59.1
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 1.3e-30 137.1 110 61.8
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.7e-30 136.7 119 57.1
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 2.2e-30 136.3 122 54.9
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 2.2e-30 136.3 115 57.4
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 2.2e-30 136.3 110 62.7
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 2.2e-30 136.3 114 57.0
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.9e-30 136.0 119 58.0
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 3.8e-30 135.6 111 60.4
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 3.8e-30 135.6 110 63.6
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 4.9e-30 135.2 116 58.6
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 6.4e-30 134.8 111 61.3
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 8.4e-30 134.4 109 59.6
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 8.4e-30 134.4 119 58.0
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 1.1e-29 134.0 111 60.4
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.1e-29 134.0 114 57.0
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 1.4e-29 133.7 114 57.0
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 2.4e-29 132.9 118 55.9
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 2.4e-29 132.9 111 60.4
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 2.4e-29 132.9 112 58.9
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 2.4e-29 132.9 115 53.9
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 4.1e-29 132.1 112 59.8
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 5.4e-29 131.7 110 58.2
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 9.2e-29 131.0 111 59.5
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.2e-28 130.6 111 59.5
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.6e-28 130.2 114 54.4
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 2.1e-28 129.8 114 55.3
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 2.1e-28 129.8 111 57.7
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 2.7e-28 129.4 114 57.0
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 2.7e-28 129.4 111 57.7
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 3.5e-28 129.0 111 59.5
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 3.5e-28 129.0 111 58.6
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 3.5e-28 129.0 116 56.0
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 4.6e-28 128.6 111 58.6
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 4.6e-28 128.6 110 59.1
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 4.6e-28 128.6 105 58.1
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 6.0e-28 128.3 118 53.4
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 7.8e-28 127.9 111 58.6
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.0e-27 127.5 114 54.4
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 1.0e-27 127.5 111 56.8
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 1.7e-27 126.7 111 55.0
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 1.7e-27 126.7 113 58.4
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 2.3e-27 126.3 111 55.9
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 3.9e-27 125.6 121 54.5
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 5.1e-27 125.2 111 56.8
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 8.7e-27 124.4 154 48.1
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.1e-26 124.0 111 55.0
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 1.1e-26 124.0 119 52.9
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 1.9e-26 123.2 109 58.7
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 1.9e-26 123.2 104 56.7
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.9e-26 123.2 123 52.0
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 1.9e-26 123.2 118 51.7
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 4.3e-26 122.1 114 54.4
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 7.3e-26 121.3 133 48.9
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 7.3e-26 121.3 132 47.7
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 6.2e-25 118.2 115 56.5
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 2.0e-23 113.2 110 48.2
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 2.9e-22 109.4 110 50.0
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 5.4e-21 105.1 89 55.1
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 1.6e-20 103.6 141 44.0
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.3e-19 99.8 78 62.8
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 9.6e-18 94.4 71 56.3
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.6e-17 93.6 74 58.1
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 2.1e-17 93.2 68 61.8
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.8e-16 90.1 104 48.1
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.2e-15 87.4 75 58.7
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 9.9e-15 84.3 68 58.8
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 9.9e-15 84.3 111 45.0
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.3e-14 84.0 82 51.2
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 2.2e-14 83.2 100 46.0
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.1e-13 80.9 111 42.3
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.4e-13 80.5 111 37.8
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 2.4e-13 79.7 104 38.5
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 3.5e-12 75.9 105 40.0
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.7e-09 65.9 75 49.3
Cre03.g201500 Chlamydomonas reinhardtii HOM05D006886 ORTHO05D008494 4.5e-07 58.9 101 33.7


User provided reference genes

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