Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc83G30 Aethionema arabicum HOM05D008567 ORTHO05D000004 6.0e-110 401.0 201 100.0
Aa31sc83G40 Aethionema arabicum HOM05D008567 ORTHO05D000004 1.8e-82 309.7 154 98.7
Aa31sc85G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.7e-22 109.0 101 48.5
Aa31sc502G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.0e-21 107.8 100 50.0
Aa31LG9G1250 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.8e-21 104.8 97 52.6
Aa31sc98G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-19 100.9 99 49.5
Aa31sc25G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-19 100.5 99 47.5
Aa31LG7G13940 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-18 97.1 99 44.4
Aa31LG1G4960 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-18 95.5 100 44.0
Aa31LG11G6920 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.0e-18 95.1 126 38.1
Aa31LG9G3130 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-17 94.0 92 53.3
Aa31sc387G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-17 93.6 109 44.0
Aa31sc629G10 Aethionema arabicum HOM05D008567 ORTHO05D059733 5.9e-17 92.0 64 76.6
Aa31sc480G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.7e-17 91.7 100 46.0
Aa31LG2G18830 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-16 89.7 93 45.2
Sp6g08450 Schrenkiella parvula HOM05D000003 ORTHO05D024751 5.0e-16 89.0 100 44.0
Aa31LG8G10880 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-15 87.8 100 48.0
Aa31LG9G1700 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.9e-15 87.0 99 42.4
Aa31sc270G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-15 86.7 100 46.0
Aa31LG10G9920 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.5e-15 85.5 158 37.3
Aa31sc214G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-14 84.3 101 44.6
Aa31sc230G10 Aethionema arabicum HOM05D000003 ORTHO05D004851 1.6e-14 84.0 92 44.6
Aa31sc228G50 Aethionema arabicum HOM05D008567 ORTHO05D000016 2.8e-14 83.2 43 97.7
Aa31sc657G20 Aethionema arabicum HOM05D008567 ORTHO05D000016 3.6e-14 82.8 46 91.3
Aa31LG8G12080 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.7e-14 82.4 94 45.7
Sp1g31060 Schrenkiella parvula HOM05D000003 ORTHO05D000004 5.2e-13 79.0 100 41.0
Aa31sc685G20 Aethionema arabicum HOM05D008567 ORTHO05D059298 6.8e-13 78.6 46 87.0
Aa31sc1234G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-12 77.4 90 43.3
Aa31sc188G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-12 77.0 100 38.0
BcaC07g38152 Brassica carinata HOM05D000003 ORTHO05D000004 7.5e-12 75.1 89 44.9
Aa31LG6G15220 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-11 73.9 109 39.4
BcaB05g22432 Brassica carinata HOM05D000003 ORTHO05D000004 1.8e-10 70.5 93 37.6
Aa31sc1325G10 Aethionema arabicum HOM05D008567 ORTHO05D058527 5.4e-10 68.9 46 78.3
Aa31LG7G10990 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.0e-10 68.6 63 49.2
BcaB01g00479 Brassica carinata HOM05D000003 ORTHO05D004851 1.6e-09 67.4 98 39.8
BcaC09g49873 Brassica carinata HOM05D000003 ORTHO05D000004 1.6e-09 67.4 80 43.8
Aa31sc2399G10 Aethionema arabicum HOM05D008567 ORTHO05D000016 3.5e-09 66.2 45 77.8
Aa31sc101G20 Aethionema arabicum HOM05D038140 ORTHO05D000004 7.8e-09 65.1 63 46.0
Aa31sc101G30 Aethionema arabicum HOM05D038140 ORTHO05D000004 7.8e-09 65.1 63 46.0
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 7.8e-09 65.1 102 32.4
Aa31sc416G10 Aethionema arabicum HOM05D008567 ORTHO05D000016 1.0e-08 64.7 45 77.8
BcaB02g10660 Brassica carinata HOM05D000003 ORTHO05D000004 1.0e-08 64.7 98 35.7
SpUn0001_0110 Schrenkiella parvula HOM05D000003 ORTHO05D004851 1.7e-08 63.9 70 38.6
Aa31sc1242G10 Aethionema arabicum HOM05D008567 ORTHO05D000016 2.3e-08 63.5 42 73.8
BcaC04g21052 Brassica carinata HOM05D000003 ORTHO05D000004 3.8e-08 62.8 89 37.1
Sp4g04930 Schrenkiella parvula HOM05D000003 ORTHO05D004851 5.0e-08 62.4 105 36.2
Aa31LG11G5340 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-08 62.0 99 27.3
Aa31LG4G9030 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-08 62.0 65 41.5
Aa31sc1062G10 Aethionema arabicum HOM05D008567 ORTHO05D000016 8.6e-08 61.6 46 67.4
BcaNung00070 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-08 61.6 98 37.8
Aa31LG7G11340 Aethionema arabicum HOM05D008567 ORTHO05D000016 1.5e-07 60.8 46 63.0
Aa31sc489G10 Aethionema arabicum HOM05D008567 ORTHO05D058608 1.5e-07 60.8 42 71.4
Aa31sc210G60 Aethionema arabicum HOM05D038140 ORTHO05D000004 1.9e-07 60.5 56 48.2
Aa31sc432G10 Aethionema arabicum HOM05D008567 ORTHO05D059345 1.9e-07 60.5 43 72.1
Sp3g33160 Schrenkiella parvula HOM05D004976 ORTHO05D004851 4.3e-07 59.3 62 41.9
Aa31LG2G17420 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.6e-07 58.9 55 52.7
Aa31sc1271G30 Aethionema arabicum HOM05D008567 ORTHO05D000016 5.6e-07 58.9 45 66.7
BolC8t47524H Brassica oleracea HOM05D000003 ORTHO05D000004 7.3e-07 58.5 102 33.3
Aa31sc2205G10 Aethionema arabicum HOM05D008567 ORTHO05D000016 9.5e-07 58.2 50 66.0
Sp1g34520 Schrenkiella parvula HOM05D000003 ORTHO05D000004 9.5e-07 58.2 99 35.4
Sp4g04140 Schrenkiella parvula HOM05D000003 ORTHO05D001091 9.5e-07 58.2 63 41.3
Aa31LG7G12670 Aethionema arabicum HOM05D008567 ORTHO05D000016 1.2e-06 57.8 52 63.5
Aa31sc1302G10 Aethionema arabicum HOM05D008567 ORTHO05D058738 1.2e-06 57.8 45 64.4
Aa31LG9G3490 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-06 57.4 63 42.9
Aa31sc295G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-06 57.0 57 43.9
BcaC01g03350 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-06 57.0 92 32.6
BcaC03g14322 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-06 57.0 77 35.1
CANSAT54G0625 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 57.0 97 34.0
QL05p065576 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-06 57.0 75 36.0
SpUn0004_0210 Schrenkiella parvula HOM05D000003 ORTHO05D004851 2.1e-06 57.0 68 45.6
BcaB05g22683 Brassica carinata HOM05D000003 ORTHO05D001498 2.8e-06 56.6 97 30.9
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 2.8e-06 56.6 92 32.6
BcaC01g02466 Brassica carinata HOM05D000003 ORTHO05D009772 2.8e-06 56.6 110 25.5
FvH4_3g21491 Fragaria vesca HOM05D000003 ORTHO05D000004 2.8e-06 56.6 115 27.0
Aa31LG9G5290 Aethionema arabicum HOM05D008567 ORTHO05D059227 3.6e-06 56.2 45 64.4
Aa31sc292G10 Aethionema arabicum HOM05D008567 ORTHO05D059394 3.6e-06 56.2 45 66.7
BcaB07g32788 Brassica carinata HOM05D000003 ORTHO05D000004 3.6e-06 56.2 96 33.3
BolC9t59489H Brassica oleracea HOM05D000003 ORTHO05D001091 3.6e-06 56.2 90 33.3
Aa31LG10G10270 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.7e-06 55.8 63 41.3
BolC3t16094H Brassica oleracea HOM05D000003 ORTHO05D016458 4.7e-06 55.8 100 31.0
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.7e-06 55.8 108 32.4
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.7e-06 55.8 110 29.1
Aa31csc121G20 Aethionema arabicum HOM05D008567 ORTHO05D000016 6.1e-06 55.5 45 62.2
AT3G09510 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 6.1e-06 55.5 90 31.1
CANSAT54G2929 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-06 55.5 92 29.3
Aa31LG2G16130 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.0e-06 55.1 57 47.4
Aa31sc490G10 Aethionema arabicum HOM05D008567 ORTHO05D000016 8.0e-06 55.1 46 60.9
BcaB07g33522 Brassica carinata HOM05D000003 ORTHO05D001498 8.0e-06 55.1 92 31.5
QL09p039085 Quercus lobata HOM05D000003 ORTHO05D000004 8.0e-06 55.1 96 28.1
RhsimUnG0226300 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.0e-06 55.1 112 29.5


User provided reference genes

Program Settings