Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc80G50 Aethionema arabicum HOM05D005892 ORTHO05D007364 3.0e-58 228.4 125 100.0
Aa31LG3G1670 Aethionema arabicum HOM05D005892 ORTHO05D007364 2.3e-29 132.5 93 72.0
BcaC01g06891 Brassica carinata HOM05D005892 ORTHO05D007364 5.6e-28 127.9 88 75.0
C03p43860 Brassica napus HOM05D005892 ORTHO05D007364 5.6e-28 127.9 88 75.0
BolC3t16654H Brassica oleracea HOM05D005892 ORTHO05D007364 5.6e-28 127.9 88 75.0
CARHR083520 Cardamine hirsuta HOM05D005892 ORTHO05D007364 9.5e-28 127.1 88 75.0
Sp3g07480 Schrenkiella parvula HOM05D005892 ORTHO05D007364 9.5e-28 127.1 88 75.0
C05p58840 Brassica napus HOM05D005892 ORTHO05D007364 1.2e-27 126.7 88 75.0
BolC5t34536H Brassica oleracea HOM05D005892 ORTHO05D007364 1.2e-27 126.7 88 75.0
BcaB04g18552 Brassica carinata HOM05D005892 ORTHO05D007364 2.1e-27 125.9 88 72.7
BraA05t22764Z Brassica rapa HOM05D005892 ORTHO05D007364 2.8e-27 125.6 88 73.9
Carub.0003s0830 Capsella rubella HOM05D005892 ORTHO05D007364 3.6e-27 125.2 89 73.0
AL3G20290 Arabidopsis lyrata HOM05D005892 ORTHO05D007364 4.7e-27 124.8 88 73.9
AT3G09180 Arabidopsis thaliana HOM05D005892 ORTHO05D007364 4.7e-27 124.8 88 73.9
THA.LOC104816617 Tarenaya hassleriana HOM05D005892 ORTHO05D007364 1.0e-26 123.6 89 71.9
Thhalv10020833m.g Eutrema salsugineum HOM05D005892 ORTHO05D007364 2.3e-26 122.5 88 72.7
CSS0032108 Camellia sinensis var. sinensis HOM05D005892 ORTHO05D007364 3.0e-26 122.1 89 69.7
BraA03t12793Z Brassica rapa HOM05D005892 ORTHO05D007364 1.2e-25 120.2 88 73.9
A03p36220 Brassica napus HOM05D005892 ORTHO05D007364 2.0e-25 119.4 88 75.0
RcHm_v2.0_Chr1g0331111 Rosa chinensis HOM05D005892 ORTHO05D007364 2.0e-25 119.4 63 90.5
A05p39800 Brassica napus HOM05D005892 ORTHO05D007364 3.4e-25 118.6 87 72.4
Cfa020027 Carpinus fangiana HOM05D005892 ORTHO05D007364 3.4e-25 118.6 92 68.5
Cc11_g05910 Coffea canephora HOM05D005892 ORTHO05D007364 3.4e-25 118.6 89 67.4
Haze_20187 Corylus avellana HOM05D005892 ORTHO05D007364 3.4e-25 118.6 92 68.5
Actinidia12433 Actinidia chinensis HOM05D005892 ORTHO05D007364 5.8e-25 117.9 88 69.3
Manes.08G033200 Manihot esculenta HOM05D005892 ORTHO05D007364 7.5e-25 117.5 92 67.4
CiPaw.10G017200 Carya illinoinensis HOM05D005892 ORTHO05D007364 9.8e-25 117.1 92 68.5
Ca_25808_v3 Cicer arietinum L. HOM05D005892 ORTHO05D007364 1.7e-24 116.3 90 66.7
GSVIVG01029940001 Vitis vinifera HOM05D005892 ORTHO05D007364 1.7e-24 116.3 94 66.0
Eucgr.K02619 Eucalyptus grandis HOM05D005892 ORTHO05D007364 2.2e-24 115.9 92 67.4
Lj3A860G48 Lonicera japonica HOM05D005892 ORTHO05D007364 2.2e-24 115.9 90 67.8
DCAR_026818 Daucus carota HOM05D005892 ORTHO05D007364 2.9e-24 115.5 89 68.5
Hma1.2p1_1525F.1_g288970 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 6.4e-24 114.4 89 66.3
Hma1.2p1_1525F.1_g288980 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 6.4e-24 114.4 89 66.3
arahy.Tifrunner.gnm1.ann1.EHSJ8W Arachis hypogaea HOM05D005892 ORTHO05D007364 8.3e-24 114.0 90 65.6
arahy.Tifrunner.gnm1.ann1.PAXQ04 Arachis hypogaea HOM05D005892 ORTHO05D007364 8.3e-24 114.0 90 65.6
Cpa.g.sc35.59 Carica papaya HOM05D005892 ORTHO05D007364 8.3e-24 114.0 92 66.3
Glyma.03G201900 Glycine max HOM05D005892 ORTHO05D007364 1.1e-23 113.6 89 64.0
Glyma.19G026300 Glycine max HOM05D005892 ORTHO05D007364 1.1e-23 113.6 89 64.0
Potri.016G070700 Populus trichocarpa HOM05D005892 ORTHO05D007364 1.1e-23 113.6 92 64.1
Sabra16G0070800 Salix brachista HOM05D005892 ORTHO05D007364 1.1e-23 113.6 92 64.1
Sabra16G0073000 Salix brachista HOM05D005892 ORTHO05D007364 1.1e-23 113.6 92 64.1
unitig_52.g17290 Utricularia gibba HOM05D005892 ORTHO05D007364 1.1e-23 113.6 89 65.2
Gohir.D01G191500 Gossypium hirsutum HOM05D005892 ORTHO05D007364 1.4e-23 113.2 91 68.1
Gorai.002G235400 Gossypium raimondii HOM05D005892 ORTHO05D007364 1.4e-23 113.2 91 68.1
Phvul.001G195400 Phaseolus vulgaris HOM05D005892 ORTHO05D007364 1.4e-23 113.2 90 66.7
SalBow2G2452 Salvia bowleyana HOM05D005892 ORTHO05D007364 1.4e-23 113.2 89 65.2
Migut.E00525 Erythranthe guttata HOM05D005892 ORTHO05D007364 1.9e-23 112.8 89 65.2
Prupe.7G094800 Prunus persica HOM05D005892 ORTHO05D007364 1.9e-23 112.8 92 65.2
Thecc.05G104100 Theobroma cacao HOM05D005892 ORTHO05D007364 1.9e-23 112.8 91 68.1
Gohir.A01G201600 Gossypium hirsutum HOM05D005892 ORTHO05D007364 2.4e-23 112.5 91 68.1
ECA234G1824 Erigeron canadensis HOM05D005892 ORTHO05D007364 3.2e-23 112.1 88 65.9
Peaxi162Scf01139g00002 Petunia axillaris HOM05D005892 ORTHO05D007364 3.2e-23 112.1 89 64.0
Rhsim09G0086500 Rhododendron simsii HOM05D005892 ORTHO05D007364 4.1e-23 111.7 89 67.4
FAN02G1987 Fragaria x ananassa HOM05D005892 ORTHO05D007364 5.4e-23 111.3 92 65.2
RcHm_v2.0_Chr3g0475881 Rosa chinensis HOM05D005892 ORTHO05D007364 5.4e-23 111.3 92 65.2
FvH4_6g20290 Fragaria vesca HOM05D005892 ORTHO05D007364 7.0e-23 110.9 92 65.2
FAN05G1366 Fragaria x ananassa HOM05D005892 ORTHO05D007364 7.0e-23 110.9 92 65.2
FAN05G3301 Fragaria x ananassa HOM05D005892 ORTHO05D007364 7.0e-23 110.9 92 65.2
FAN14G3222 Fragaria x ananassa HOM05D005892 ORTHO05D007364 7.0e-23 110.9 92 65.2
Nitab4.5_0007165g0010 Nicotiana tabacum HOM05D005892 ORTHO05D007364 7.0e-23 110.9 89 64.0
Ciclev10011749m.g Citrus clementina HOM05D005892 ORTHO05D007364 9.2e-23 110.5 92 64.1
FAN05G0385 Fragaria x ananassa HOM05D005892 ORTHO05D007364 9.2e-23 110.5 92 65.2
FAN05G3684 Fragaria x ananassa HOM05D005892 ORTHO05D007364 9.2e-23 110.5 92 64.1
VMungo1383G1945 Vigna mungo HOM05D005892 ORTHO05D007364 9.2e-23 110.5 89 62.9
MSTRG.13644 Avicennia marina HOM05D005892 ORTHO05D007364 1.2e-22 110.2 89 64.0
FAN09G4751 Fragaria x ananassa HOM05D005892 ORTHO05D007364 1.2e-22 110.2 92 65.2
Lj1g0008745 Lotus japonicus HOM05D005892 ORTHO05D007364 1.2e-22 110.2 90 62.2
Psat3g029200 Pisum sativum HOM05D005892 ORTHO05D007364 1.2e-22 110.2 90 63.3
MELO3C009537.2 Cucumis melo HOM05D005892 ORTHO05D007364 1.6e-22 109.8 87 66.7
Duzib093G2092 Durio zibethinus HOM05D005892 ORTHO05D007364 1.6e-22 109.8 90 67.8
ClCG10G018360 Citrullus lanatus HOM05D005892 ORTHO05D007364 2.0e-22 109.4 89 65.2
Atru.chr8.1369 Acer truncatum HOM05D005892 ORTHO05D007364 2.7e-22 109.0 92 64.1
Ah.10g030320 Amaranthus hybridus HOM05D005892 ORTHO05D007364 2.7e-22 109.0 89 65.2
COL.COLO4_29579 Corchorus olitorius HOM05D005892 ORTHO05D007364 2.7e-22 109.0 90 66.7
SGA_v2.0_scaffold65G22109 Striga asiatica HOM05D005892 ORTHO05D007364 2.7e-22 109.0 89 62.9
EL10Ac9g21147 Beta vulgaris HOM05D005892 ORTHO05D007364 3.5e-22 108.6 89 64.0
QL07p036776 Quercus lobata HOM05D005892 ORTHO05D007364 3.5e-22 108.6 56 91.1
CAN.G219.4 Capsicum annuum HOM05D005892 ORTHO05D007364 4.6e-22 108.2 87 64.4
AUR62036522 Chenopodium quinoa HOM05D005892 ORTHO05D007364 4.6e-22 108.2 89 64.0
AUR62042262 Chenopodium quinoa HOM05D005892 ORTHO05D007364 4.6e-22 108.2 89 64.0
MD14G1038600 Malus domestica HOM05D005892 ORTHO05D007364 4.6e-22 108.2 56 92.9
PSO384G1009 Papaver somniferum HOM05D005892 ORTHO05D007364 4.6e-22 108.2 56 92.9
CsaV3_3G037930 Cucumis sativus L. HOM05D005892 ORTHO05D007364 6.0e-22 107.8 56 92.9
Sed0021278 Sechium edule HOM05D005892 ORTHO05D007364 6.0e-22 107.8 56 92.9
Lsat_1_v5_gn_4_22820 Lactuca sativa HOM05D005892 ORTHO05D007364 7.8e-22 107.5 87 64.4
Hund10710 Selenicereus undatus HOM05D005892 ORTHO05D007364 7.8e-22 107.5 89 65.2
Sc07g0007600 Simmondsia chinensis HOM05D005892 ORTHO05D007364 7.8e-22 107.5 88 64.8
Solyc01g087230.3 Solanum lycopersicum HOM05D005892 ORTHO05D007364 7.8e-22 107.5 87 64.4
Sopen01g034280 Solanum pennellii HOM05D005892 ORTHO05D007364 7.8e-22 107.5 87 64.4
PGSC0003DMG400006864 Solanum tuberosum HOM05D005892 ORTHO05D007364 7.8e-22 107.5 87 64.4
HanXRQChr16g0527301 Helianthus annuus HOM05D005892 ORTHO05D007364 1.0e-21 107.1 56 91.1
Lalb_Chr20g0111381 Lupinus albus HOM05D005892 ORTHO05D007364 1.0e-21 107.1 91 60.4
Medtr7g106200 Medicago truncatula HOM05D005892 ORTHO05D007364 1.0e-21 107.1 106 56.6
Nitab4.5_0005476g0010 Nicotiana tabacum HOM05D005892 ORTHO05D007364 1.0e-21 107.1 89 62.9
PSO339G5192 Papaver somniferum HOM05D005892 ORTHO05D007364 1.0e-21 107.1 56 91.1
PGR142G3547 Punica granatum HOM05D005892 ORTHO05D007364 3.0e-21 105.5 56 89.3
Aqoxy1G00010 Aquilegia oxysepala HOM05D005892 ORTHO05D007364 5.0e-21 104.8 56 89.3
TAR633G0738 Trochodendron aralioides HOM05D005892 ORTHO05D007364 6.6e-21 104.4 56 89.3
TAR633G2239 Trochodendron aralioides HOM05D005892 ORTHO05D007364 6.6e-21 104.4 56 89.3
HPP92_001347 Vanilla planifolia HOM05D005892 ORTHO05D007364 1.9e-20 102.8 56 87.5
HPP92_001371 Vanilla planifolia HOM05D005892 ORTHO05D007364 1.9e-20 102.8 56 87.5
Nn2g14624 Nelumbo nucifera HOM05D005892 ORTHO05D007364 2.5e-20 102.4 97 59.8
MBI19_g09306_MAGBIO Magnolia biondii HOM05D005892 ORTHO05D007364 4.3e-20 101.7 56 87.5
Atru.chr9.699 Acer truncatum HOM05D005892 ORTHO05D007364 7.3e-20 100.9 56 83.9
Os01g0263500 Oryza sativa ssp. japonica HOM05D005892 ORTHO05D007364 9.5e-20 100.5 56 83.9
Zm00001eb156320 Zea mays HOM05D005892 ORTHO05D007364 9.5e-20 100.5 56 83.9
Zm00001eb348930 Zea mays HOM05D005892 ORTHO05D007364 1.2e-19 100.1 56 83.9
Nn2g14691 Nelumbo nucifera HOM05D005892 ORTHO05D007364 1.6e-19 99.8 55 89.1
CDE02G2672 Ceratophyllum demersum HOM05D005892 ORTHO05D007364 3.6e-19 98.6 56 83.9
ATR0068G118 Amborella trichopoda HOM05D005892 ORTHO05D007364 5.2e-18 94.7 57 82.5
CDE04G0639 Ceratophyllum demersum HOM05D005892 ORTHO05D007364 4.4e-17 91.7 56 78.6
TPR.G14083 Trifolium pratense HOM05D005892 ORTHO05D007364 5.8e-17 91.3 83 57.8
HPP92_001441 Vanilla planifolia HOM05D005892 ORTHO05D007364 6.6e-13 77.8 56 69.6
Mapoly0090s0009 Marchantia polymorpha HOM05D005892 ORTHO05D007364 8.1e-11 70.9 89 46.1
Peaxi162Scf00684g00585 Petunia axillaris HOM05D005892 ORTHO05D007364 6.8e-10 67.8 87 43.7
Pp3c15_4850 Physcomitrium patens HOM05D005892 ORTHO05D007364 1.2e-06 57.0 58 50.0
AagrBONN_evm.TU.Sc2ySwM_228.2745 Anthoceros agrestis HOM05D005892 ORTHO05D007364 2.7e-06 55.8 58 46.6


User provided reference genes

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