Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 3.9e-145 518.1 254 100.0
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 1.9e-112 409.5 252 79.4
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 1.2e-109 400.2 254 79.5
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 2.6e-109 399.1 253 77.5
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 4.5e-109 398.3 254 76.4
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 1.0e-108 397.1 253 77.5
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 1.7e-108 396.4 258 78.3
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 3.8e-108 395.2 253 76.7
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 3.2e-107 392.1 255 77.6
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 4.3e-104 381.7 255 75.7
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.3e-103 380.2 255 76.5
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.1e-102 377.1 256 75.4
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.1e-102 377.1 256 75.4
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 7.4e-96 354.4 260 69.6
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 1.3e-92 343.6 246 68.3
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 2.9e-92 342.4 246 68.3
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 2.9e-92 342.4 246 68.3
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 1.1e-91 340.5 258 66.7
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.4e-91 340.1 258 66.7
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 2.5e-91 339.3 250 67.6
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 3.2e-91 339.0 211 75.4
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 7.2e-91 337.8 197 78.7
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 9.4e-91 337.4 213 75.6
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 2.7e-90 335.9 221 71.0
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 2.7e-90 335.9 220 71.8
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 6.1e-90 334.7 199 78.4
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 7.9e-90 334.3 245 68.6
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 7.9e-90 334.3 222 72.5
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 1.4e-89 333.6 250 65.2
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 1.8e-89 333.2 251 65.7
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 1.8e-89 333.2 252 65.1
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.8e-89 333.2 246 67.5
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 2.3e-89 332.8 225 70.7
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 6.7e-89 331.3 215 73.5
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 1.1e-88 330.5 219 71.7
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 2.0e-88 329.7 250 65.2
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.6e-88 329.3 215 74.0
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.3e-88 328.9 214 73.4
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 3.3e-88 328.9 213 72.8
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 5.7e-88 328.2 235 67.2
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 1.3e-87 327.0 250 64.0
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 1.7e-87 326.6 209 72.7
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 2.2e-87 326.2 267 63.3
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 2.2e-87 326.2 215 73.0
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 4.8e-87 325.1 225 70.2
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 8.2e-87 324.3 242 64.0
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 8.2e-87 324.3 197 74.6
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 8.2e-87 324.3 219 71.7
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 8.2e-87 324.3 247 64.4
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 8.2e-87 324.3 194 76.3
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 1.1e-86 323.9 250 65.2
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.1e-86 323.9 261 63.6
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 1.4e-86 323.6 209 72.7
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.4e-86 323.6 208 73.6
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 2.4e-86 322.8 224 68.3
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 3.1e-86 322.4 245 63.7
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 4.1e-86 322.0 257 63.0
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 7.0e-86 321.2 208 72.1
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 9.1e-86 320.9 255 62.7
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 9.1e-86 320.9 215 72.1
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 3.5e-85 318.9 209 70.8
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 4.5e-85 318.5 196 74.5
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 5.9e-85 318.2 196 76.0
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.0e-84 317.4 196 75.5
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 3.8e-84 315.5 197 75.1
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 3.8e-84 315.5 199 74.9
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 3.8e-84 315.5 196 74.5
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 6.5e-84 314.7 197 75.1
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.9e-83 313.2 197 73.1
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 2.5e-83 312.8 231 66.7
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 3.2e-83 312.4 202 70.8
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 4.2e-83 312.0 197 74.6
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 7.2e-83 311.2 234 65.0
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 9.4e-83 310.8 249 63.5
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.0e-81 307.4 218 66.5
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 6.7e-81 304.7 200 69.5
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 6.7e-81 304.7 194 74.2
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 3.3e-80 302.4 197 72.1
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 4.4e-80 302.0 201 69.2
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 4.4e-80 302.0 169 83.4
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 4.4e-80 302.0 191 73.3
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 7.5e-80 301.2 191 70.7
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 1.8e-78 296.6 194 69.1
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 3.1e-78 295.8 193 70.5
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 1.1e-75 287.3 195 69.7
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 5.5e-75 285.0 197 70.1
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.0e-74 281.2 172 73.8
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.2e-72 277.3 236 58.9
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 9.8e-72 274.2 161 74.5
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 5.4e-70 268.5 208 65.9
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 2.7e-69 266.2 165 72.7
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 4.5e-69 265.4 198 63.1
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 1.3e-68 263.8 194 67.0
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 6.1e-66 255.0 165 73.3
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 3.0e-65 252.7 306 46.7
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 1.5e-64 250.4 278 50.4
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 8.3e-63 244.6 169 69.8
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.5e-56 223.8 186 63.4
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 1.6e-53 213.8 170 64.1
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.2e-50 204.1 122 72.1
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 3.4e-48 196.1 228 50.4
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 7.5e-48 194.9 119 72.3
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 3.5e-45 186.0 190 52.6
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 2.5e-43 179.9 165 55.8
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 4.7e-42 175.6 161 58.4
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 2.0e-40 170.2 103 73.8
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 4.1e-38 162.5 250 41.6
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 1.1e-35 154.5 435 30.1
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.8e-33 147.1 97 69.1
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 4.0e-33 146.0 213 43.2
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.3e-27 125.9 78 73.1
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 8.9e-25 118.2 76 69.7
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 1.3e-23 114.4 71 70.4
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 9.3e-14 81.6 96 45.8
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 58.2 51 60.8
Rhsim04G0095100 Rhododendron simsii HOM05D003299 ORTHO05D003811 9.3e-06 55.1 62 50.0


User provided reference genes

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