Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc79G60 Aethionema arabicum HOM05D004794 ORTHO05D005875 5.1e-199 697.6 363 100.0
Sp2g12580 Schrenkiella parvula HOM05D004794 ORTHO05D005875 3.6e-152 542.0 326 87.4
BcaC06g34216 Brassica carinata HOM05D004794 ORTHO05D005875 9.8e-150 533.9 326 86.2
Carub.0005s0009 Capsella rubella HOM05D004794 ORTHO05D005875 2.2e-149 532.7 344 83.1
C07p31580 Brassica napus HOM05D004794 ORTHO05D005875 4.8e-149 531.6 326 85.6
BolC7t43697H Brassica oleracea HOM05D004794 ORTHO05D005875 1.1e-148 530.4 326 85.6
A06p44670 Brassica napus HOM05D004794 ORTHO05D005875 1.8e-148 529.6 326 85.9
BraA06t27340Z Brassica rapa HOM05D004794 ORTHO05D005875 9.1e-148 527.3 326 85.3
BolC2t10997H Brassica oleracea HOM05D004794 ORTHO05D005875 2.7e-147 525.8 344 81.7
BcaC03g16998 Brassica carinata HOM05D004794 ORTHO05D005875 1.0e-146 523.9 326 84.7
C02p49070 Brassica napus HOM05D004794 ORTHO05D005875 3.8e-146 521.9 326 84.0
BcaB07g30424 Brassica carinata HOM05D004794 ORTHO05D005875 1.9e-145 519.6 326 84.4
AL5G10060 Arabidopsis lyrata HOM05D004794 ORTHO05D005875 2.5e-145 519.2 326 85.3
BcaC06g31333 Brassica carinata HOM05D004794 ORTHO05D005875 2.5e-145 519.2 346 81.2
A02p31690 Brassica napus HOM05D004794 ORTHO05D005875 7.2e-145 517.7 327 83.8
BraA02t08175Z Brassica rapa HOM05D004794 ORTHO05D005875 1.2e-144 516.9 327 83.8
AT2G01110 Arabidopsis thaliana HOM05D004794 ORTHO05D005875 1.0e-143 513.8 326 85.0
CARHR143660 Cardamine hirsuta HOM05D004794 ORTHO05D005875 3.7e-141 505.4 326 82.2
THA.LOC104805049 Tarenaya hassleriana HOM05D004794 ORTHO05D005875 9.2e-140 500.7 353 77.1
Thhalv10000946m.g Eutrema salsugineum HOM05D004794 ORTHO05D005875 3.0e-135 485.7 326 81.6
Ciclev10015744m.g Citrus clementina HOM05D004794 ORTHO05D005875 1.6e-131 473.4 351 73.8
Manes.14G109500 Manihot esculenta HOM05D004794 ORTHO05D005875 5.6e-129 464.9 304 81.9
Gohir.A12G142300 Gossypium hirsutum HOM05D004794 ORTHO05D005875 7.3e-129 464.5 306 82.0
Nn4g24023 Nelumbo nucifera HOM05D004794 ORTHO05D005875 1.2e-128 463.8 293 82.9
Gohir.D12G147200 Gossypium hirsutum HOM05D004794 ORTHO05D005875 1.6e-128 463.4 306 81.7
Gorai.008G158400 Gossypium raimondii HOM05D004794 ORTHO05D005875 1.6e-128 463.4 306 81.7
Phvul.007G034300 Phaseolus vulgaris HOM05D004794 ORTHO05D005875 2.8e-128 462.6 298 79.5
PGR102G0643 Punica granatum HOM05D004794 ORTHO05D005875 8.0e-128 461.1 291 82.5
Thecc.02G215600 Theobroma cacao HOM05D004794 ORTHO05D005875 1.4e-127 460.3 355 71.5
TWI75G0950 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 8.9e-127 457.6 298 82.6
Sc04g0005890 Simmondsia chinensis HOM05D004794 ORTHO05D005875 1.2e-126 457.2 289 83.0
Cfa015814 Carpinus fangiana HOM05D004794 ORTHO05D005875 1.5e-126 456.8 319 78.1
Glyma.10G268000 Glycine max HOM05D004794 ORTHO05D005875 2.6e-126 456.1 301 79.7
Eucgr.B02866 Eucalyptus grandis HOM05D004794 ORTHO05D005875 4.4e-126 455.3 302 80.1
TWI79G0577 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 4.4e-126 455.3 298 81.9
Glyma.20G123100 Glycine max HOM05D004794 ORTHO05D005875 9.8e-126 454.1 301 78.7
Psat6g222720 Pisum sativum HOM05D004794 ORTHO05D005875 1.7e-125 453.4 319 73.7
EL10Ac6g14275 Beta vulgaris HOM05D004794 ORTHO05D005875 2.9e-125 452.6 281 84.7
QL01p003046 Quercus lobata HOM05D004794 ORTHO05D005875 4.9e-125 451.8 314 78.7
Actinidia31991 Actinidia chinensis HOM05D004794 ORTHO05D005875 6.4e-125 451.4 317 75.7
Manes.06G063100 Manihot esculenta HOM05D004794 ORTHO05D005875 6.4e-125 451.4 303 79.2
Lj5g0022431 Lotus japonicus HOM05D004794 ORTHO05D005875 8.3e-125 451.1 311 75.6
TAR374G0638 Trochodendron aralioides HOM05D004794 ORTHO05D005875 8.3e-125 451.1 309 78.3
Atru.chr11.341 Acer truncatum HOM05D004794 ORTHO05D005875 1.1e-124 450.7 313 78.6
Atru.chr11.334 Acer truncatum HOM05D004794 ORTHO05D005875 1.9e-124 449.9 313 78.3
AUR62002773 Chenopodium quinoa HOM05D004794 ORTHO05D005875 2.4e-124 449.5 289 83.0
Hund25018 Selenicereus undatus HOM05D004794 ORTHO05D005875 2.4e-124 449.5 272 86.4
MD13G1032500 Malus domestica HOM05D004794 ORTHO05D005875 4.1e-124 448.7 311 75.6
CiPaw.05G245300 Carya illinoinensis HOM05D004794 ORTHO05D005875 5.4e-124 448.4 322 76.1
Ah.03g138420 Amaranthus hybridus HOM05D004794 ORTHO05D005875 7.0e-124 448.0 287 82.9
arahy.Tifrunner.gnm1.ann1.B80FEM Arachis hypogaea HOM05D004794 ORTHO05D005875 9.2e-124 447.6 354 69.5
Potri.010G117200 Populus trichocarpa HOM05D004794 ORTHO05D005875 9.2e-124 447.6 301 77.7
GSVIVG01011805001 Vitis vinifera HOM05D004794 ORTHO05D005875 9.2e-124 447.6 315 75.2
Prupe.1G320000 Prunus persica HOM05D004794 ORTHO05D005875 1.6e-123 446.8 308 76.0
RcHm_v2.0_Chr4g0434021 Rosa chinensis HOM05D004794 ORTHO05D005875 1.6e-123 446.8 308 77.3
Medtr1g109080 Medicago truncatula HOM05D004794 ORTHO05D005875 3.5e-123 445.7 295 76.9
TAR622G1294 Trochodendron aralioides HOM05D004794 ORTHO05D005875 6.0e-123 444.9 291 80.4
Zm00001eb009240 Zea mays HOM05D004794 ORTHO05D005875 7.8e-123 444.5 308 78.2
Dinv16165 Davidia involucrata HOM05D004794 ORTHO05D005875 1.3e-122 443.7 302 79.1
Aqoxy5G03876 Aquilegia oxysepala HOM05D004794 ORTHO05D005875 1.7e-122 443.4 340 72.4
Dinv04904 Davidia involucrata HOM05D004794 ORTHO05D005875 1.7e-122 443.4 300 78.7
MD16G1034600 Malus domestica HOM05D004794 ORTHO05D005875 2.3e-122 443.0 308 75.3
FvH4_4g26390 Fragaria vesca HOM05D004794 ORTHO05D005875 3.9e-122 442.2 309 77.3
FAN12G0017 Fragaria x ananassa HOM05D004794 ORTHO05D005875 3.9e-122 442.2 309 77.3
FAN12G0914 Fragaria x ananassa HOM05D004794 ORTHO05D005875 3.9e-122 442.2 309 77.3
Lj3A877T98 Lonicera japonica HOM05D004794 ORTHO05D005875 3.9e-122 442.2 289 80.3
ATR0691G049 Amborella trichopoda HOM05D004794 ORTHO05D005875 5.0e-122 441.8 298 79.9
PSO445G0020 Papaver somniferum HOM05D004794 ORTHO05D005875 5.0e-122 441.8 298 78.5
vmacro01423 Vaccinium macrocarpon HOM05D004794 ORTHO05D005875 5.0e-122 441.8 297 80.1
arahy.Tifrunner.gnm1.ann1.9SFQ4R Arachis hypogaea HOM05D004794 ORTHO05D005875 6.6e-122 441.4 357 68.9
CANSAT01G0565 Cannabis sativa HOM05D004794 ORTHO05D005875 6.6e-122 441.4 298 76.5
FAN22G0499 Fragaria x ananassa HOM05D004794 ORTHO05D005875 8.6e-122 441.0 308 77.9
PSO170G3473 Papaver somniferum HOM05D004794 ORTHO05D005875 8.6e-122 441.0 298 78.5
FAN07G1519 Fragaria x ananassa HOM05D004794 ORTHO05D005875 1.1e-121 440.7 309 77.7
FAN17G0450 Fragaria x ananassa HOM05D004794 ORTHO05D005875 1.1e-121 440.7 308 77.9
Lalb_Chr06g0165741 Lupinus albus HOM05D004794 ORTHO05D005875 1.5e-121 440.3 325 71.7
HanXRQChr15g0477711 Helianthus annuus HOM05D004794 ORTHO05D005875 2.5e-121 439.5 278 82.0
Hma1.2p1_0114F.1_g055470 Hydrangea macrophylla HOM05D004794 ORTHO05D005875 5.6e-121 438.3 285 80.0
Nitab4.5_0013146g0030 Nicotiana tabacum HOM05D004794 ORTHO05D005875 5.6e-121 438.3 311 75.9
CDE06G2233 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 7.3e-121 438.0 277 82.3
Os01g0501700 Oryza sativa ssp. japonica HOM05D004794 ORTHO05D005875 7.3e-121 438.0 308 76.9
Ca_23704_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 9.5e-121 437.6 294 76.2
Ca_30211_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 9.5e-121 437.6 294 76.2
SGA_v2.0_scaffold376G50295 Striga asiatica HOM05D004794 ORTHO05D005875 9.5e-121 437.6 308 74.7
Lalb_Chr02g0145631 Lupinus albus HOM05D004794 ORTHO05D005875 1.2e-120 437.2 298 76.2
PGSC0003DMG400030563 Solanum tuberosum HOM05D004794 ORTHO05D005875 1.2e-120 437.2 299 77.3
Peaxi162Scf00205g01022 Petunia axillaris HOM05D004794 ORTHO05D005875 1.6e-120 436.8 288 79.9
HanXRQChr01g0013251 Helianthus annuus HOM05D004794 ORTHO05D005875 2.8e-120 436.0 277 81.2
HPP92_027135 Vanilla planifolia HOM05D004794 ORTHO05D005875 2.8e-120 436.0 298 78.5
Nitab4.5_0000350g0140 Nicotiana tabacum HOM05D004794 ORTHO05D005875 3.6e-120 435.6 311 75.6
CAN.G1489.14 Capsicum annuum HOM05D004794 ORTHO05D005875 6.2e-120 434.9 313 73.2
ECA246G3704 Erigeron canadensis HOM05D004794 ORTHO05D005875 6.2e-120 434.9 294 77.6
Solyc05g008530.3 Solanum lycopersicum HOM05D004794 ORTHO05D005875 1.1e-119 434.1 299 76.6
Sopen05g004370 Solanum pennellii HOM05D004794 ORTHO05D005875 2.3e-119 433.0 299 76.6
DCAR_007276 Daucus carota HOM05D004794 ORTHO05D005875 3.1e-119 432.6 268 83.2
Sabra10G0086800 Salix brachista HOM05D004794 ORTHO05D005875 3.1e-119 432.6 258 84.5
Sabra10G0088400 Salix brachista HOM05D004794 ORTHO05D005875 3.1e-119 432.6 258 84.5
Sed0004857 Sechium edule HOM05D004794 ORTHO05D005875 4.0e-119 432.2 344 69.5
HPP92_021566 Vanilla planifolia HOM05D004794 ORTHO05D005875 6.8e-119 431.4 296 77.7
MELO3C012288.2 Cucumis melo HOM05D004794 ORTHO05D005875 8.9e-119 431.0 296 77.4
MSTRG.13564 Avicennia marina HOM05D004794 ORTHO05D005875 1.2e-118 430.6 299 75.3
CDE07G0253 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 2.0e-118 429.9 258 85.3
CsaV3_5G034760 Cucumis sativus L. HOM05D004794 ORTHO05D005875 2.0e-118 429.9 296 77.0
ClCG05G022340 Citrullus lanatus HOM05D004794 ORTHO05D005875 2.6e-118 429.5 297 78.1
Oeu029170.1 Olea europaea HOM05D004794 ORTHO05D005875 3.4e-118 429.1 310 71.6
EL10Ac4g08742 Beta vulgaris HOM05D004794 ORTHO05D005875 7.5e-118 427.9 293 78.8
SEGI_17562 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 7.5e-118 427.9 313 73.8
Lsat_1_v5_gn_3_54000 Lactuca sativa HOM05D004794 ORTHO05D005875 2.2e-117 426.4 285 78.2
Migut.E00392 Erythranthe guttata HOM05D004794 ORTHO05D005875 2.9e-117 426.0 297 73.7
Haze_00684 Corylus avellana HOM05D004794 ORTHO05D005875 4.9e-117 425.2 310 75.8
MBI16_g29821_MAGBIO Magnolia biondii HOM05D004794 ORTHO05D005875 6.4e-117 424.9 288 77.8
COL.COLO4_20120 Corchorus olitorius HOM05D004794 ORTHO05D005875 8.3e-117 424.5 256 86.7
Duzib251G0273 Durio zibethinus HOM05D004794 ORTHO05D005875 1.9e-116 423.3 312 74.4
SalBow8G5373 Salvia bowleyana HOM05D004794 ORTHO05D005875 2.4e-116 422.9 308 72.1
Cc11_g09270 Coffea canephora HOM05D004794 ORTHO05D005875 4.1e-116 422.2 298 75.5
Duzib268G0539 Durio zibethinus HOM05D004794 ORTHO05D005875 4.1e-116 422.2 315 73.0
CSS0006530 Camellia sinensis var. sinensis HOM05D004794 ORTHO05D005875 5.4e-116 421.8 353 68.8
Oeu048392.1 Olea europaea HOM05D004794 ORTHO05D005875 5.4e-116 421.8 256 82.0
Lj6A750T92 Lonicera japonica HOM05D004794 ORTHO05D005875 3.0e-114 416.0 268 79.9
AUR62037257 Chenopodium quinoa HOM05D004794 ORTHO05D005875 1.2e-112 410.6 380 63.2
HPP92_020138 Vanilla planifolia HOM05D004794 ORTHO05D005875 1.6e-112 410.2 299 75.9
Migut.L01019 Erythranthe guttata HOM05D004794 ORTHO05D005875 4.7e-112 408.7 287 75.3
Mapoly0010s0061 Marchantia polymorpha HOM05D004794 ORTHO05D005875 1.8e-111 406.8 347 66.0
Rhsim12G0088300 Rhododendron simsii HOM05D004794 ORTHO05D005875 3.4e-110 402.5 342 66.1
Pp3c3_36440 Physcomitrium patens HOM05D004794 ORTHO05D005875 1.9e-108 396.7 255 79.2
SMO119G0095 Selaginella moellendorffii HOM05D004794 ORTHO05D005875 2.4e-108 396.4 251 79.3
DCAR_030186 Daucus carota HOM05D004794 ORTHO05D005875 7.1e-108 394.8 225 88.4
Lsat_1_v5_gn_4_15760 Lactuca sativa HOM05D004794 ORTHO05D005875 4.6e-107 392.1 275 74.9
AagrBONN_evm.TU.Sc2ySwM_368.2774 Anthoceros agrestis HOM05D004794 ORTHO05D005875 1.0e-106 391.0 274 74.8
Pp3c8_3800 Physcomitrium patens HOM05D004794 ORTHO05D005875 1.0e-106 391.0 305 70.5
SalBow8G4147 Salvia bowleyana HOM05D004794 ORTHO05D005875 1.3e-106 390.6 380 60.5
CBR_g19219 Chara braunii HOM05D004794 ORTHO05D005875 6.2e-104 381.7 242 79.8
ECA234G2688 Erigeron canadensis HOM05D004794 ORTHO05D005875 8.1e-104 381.3 256 74.6
HanXRQChr17g0567091 Helianthus annuus HOM05D004794 ORTHO05D005875 6.9e-103 378.3 249 77.9
TPR.G4856 Trifolium pratense HOM05D004794 ORTHO05D005875 2.2e-101 373.2 272 71.0
PRCOL_00000588 Prasinoderma coloniale HOM05D004794 ORTHO05D005875 7.3e-97 358.2 276 66.7
Zm00001eb399680 Zea mays HOM05D004794 ORTHO05D005875 3.4e-94 349.4 297 66.3
MCO02G003 Micromonas commoda HOM05D004794 ORTHO05D005875 9.9e-94 347.8 251 71.7
Cre03.g145887 Chlamydomonas reinhardtii HOM05D004794 ORTHO05D005875 4.3e-89 332.4 273 64.5
Oeu022847.1 Olea europaea HOM05D004794 ORTHO05D005875 2.1e-88 330.1 220 76.8
VMungo0720G1627 Vigna mungo HOM05D004794 ORTHO05D005875 6.7e-82 308.5 301 60.1
BcaC03g16992 Brassica carinata HOM05D004794 ORTHO05D005875 2.0e-70 270.4 198 73.2
A09p23220 Brassica napus HOM05D004794 ORTHO05D005875 2.2e-69 266.9 155 88.4
BraA09t37925Z Brassica rapa HOM05D004794 ORTHO05D005875 1.1e-68 264.6 155 87.7
BolC2t10985H Brassica oleracea HOM05D004794 ORTHO05D005875 9.4e-68 261.5 198 71.2
unitig_8.g3987 Utricularia gibba HOM05D000722 ORTHO05D000590 4.5e-62 242.7 191 67.5
Cpa.g.sc65.92 Carica papaya HOM05D004794 ORTHO05D005875 1.1e-47 194.9 108 94.4
C09p29960 Brassica napus HOM05D004794 ORTHO05D039171 4.1e-39 166.4 121 73.6
SEGI_30482 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 3.5e-38 163.3 102 83.3
SEGI_31512 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 5.9e-38 162.5 99 84.8
SEGI_19547 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 8.0e-35 152.1 150 58.7
BcaC04g21603 Brassica carinata HOM05D004794 ORTHO05D039171 6.6e-29 132.5 238 44.1
BolC9t55859H Brassica oleracea HOM05D004794 ORTHO05D005875 2.0e-22 110.9 64 93.8
unitig_8.g3988 Utricularia gibba HOM05D004794 ORTHO05D005875 3.3e-20 103.6 61 86.9


User provided reference genes

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