Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc78G10 Aethionema arabicum HOM05D031451 ORTHO05D026454 4.6e-35 150.6 72 100.0
Aa31sc78G20 Aethionema arabicum HOM05D000436 ORTHO05D001944 2.9e-21 104.8 52 96.2
Aa31sc88G90 Aethionema arabicum HOM05D000436 ORTHO05D001944 2.9e-21 104.8 52 96.2
A04p29010 Brassica napus HOM05D000436 ORTHO05D001944 1.7e-13 79.0 52 71.2
BraA04t18374Z Brassica rapa HOM05D000436 ORTHO05D001944 1.7e-13 79.0 52 71.2
C04p66250 Brassica napus HOM05D000436 ORTHO05D001944 8.5e-13 76.6 52 69.2
BolC4t28129H Brassica oleracea HOM05D000436 ORTHO05D001944 8.5e-13 76.6 52 69.2
AT2G37880 Arabidopsis thaliana HOM05D000436 ORTHO05D001944 1.9e-12 75.5 50 76.0
Thhalv10017650m.g Eutrema salsugineum HOM05D000436 ORTHO05D001944 2.5e-12 75.1 52 67.3
AL4G34820 Arabidopsis lyrata HOM05D000436 ORTHO05D001944 4.2e-12 74.3 50 76.0
CARHR132430 Cardamine hirsuta HOM05D000436 ORTHO05D001944 1.2e-11 72.8 50 74.0
Sp4g20190 Schrenkiella parvula HOM05D000436 ORTHO05D001944 1.6e-11 72.4 52 65.4
Carub.0004s1979 Capsella rubella HOM05D000436 ORTHO05D001944 2.7e-11 71.6 50 72.0
Solyc09g011350.3 Solanum lycopersicum HOM05D000436 ORTHO05D001944 7.9e-11 70.1 52 63.5
Sopen09g006070 Solanum pennellii HOM05D000436 ORTHO05D001944 7.9e-11 70.1 52 63.5
PGSC0003DMG400024262 Solanum tuberosum HOM05D000436 ORTHO05D001944 7.9e-11 70.1 52 63.5
THA.LOC104805624 Tarenaya hassleriana HOM05D000436 ORTHO05D001944 7.9e-11 70.1 52 65.4
BraA03t11331Z Brassica rapa HOM05D000436 ORTHO05D001944 1.4e-10 69.3 52 61.5
BcaB01g03743 Brassica carinata HOM05D000436 ORTHO05D001944 1.8e-10 68.9 52 61.5
BcaC01g05587 Brassica carinata HOM05D000436 ORTHO05D001944 1.8e-10 68.9 52 61.5
A03p20910 Brassica napus HOM05D000436 ORTHO05D001944 1.8e-10 68.9 52 61.5
BolC3t14854H Brassica oleracea HOM05D000436 ORTHO05D001944 1.8e-10 68.9 52 61.5
C01p39420 Brassica napus HOM05D031451 ORTHO05D026454 5.1e-10 67.4 38 81.6
BolC1t03891H Brassica oleracea HOM05D031451 ORTHO05D026454 5.1e-10 67.4 38 81.6
BcaB01g03748 Brassica carinata HOM05D000436 ORTHO05D001944 6.7e-10 67.0 52 61.5
C03p24560 Brassica napus HOM05D000436 ORTHO05D001944 6.7e-10 67.0 52 61.5
Hma1.2p1_1498F.1_g287150 Hydrangea macrophylla HOM05D000436 ORTHO05D001944 4.3e-09 64.3 50 62.0
Nitab4.5_0000362g0090 Nicotiana tabacum HOM05D000436 ORTHO05D001944 7.4e-09 63.5 52 53.8
Dinv37127 Davidia involucrata HOM05D000436 ORTHO05D001944 1.7e-08 62.4 38 71.1
DCAR_028777 Daucus carota HOM05D000436 ORTHO05D001944 3.7e-08 61.2 52 55.8
Lj2C87T10 Lonicera japonica HOM05D000436 ORTHO05D001944 4.8e-08 60.8 52 57.7
CANSAT35G0644 Cannabis sativa HOM05D000436 ORTHO05D001944 1.8e-07 58.9 48 58.3
ECA236G3548 Erigeron canadensis HOM05D000436 ORTHO05D001944 1.8e-07 58.9 41 65.9
Lsat_1_v5_gn_8_84741 Lactuca sativa HOM05D000436 ORTHO05D001944 1.8e-07 58.9 41 63.4
Ciclev10013699m.g Citrus clementina HOM05D000436 ORTHO05D001944 2.4e-07 58.5 53 49.1
Gohir.D01G086400 Gossypium hirsutum HOM05D000436 ORTHO05D001944 2.4e-07 58.5 46 50.0
Rhsim05G0197100 Rhododendron simsii HOM05D000436 ORTHO05D001944 2.4e-07 58.5 38 68.4
Actinidia13823 Actinidia chinensis HOM05D000436 ORTHO05D001944 3.1e-07 58.2 38 65.8
CAN.G229.36 Capsicum annuum HOM05D000436 ORTHO05D001944 3.1e-07 58.2 38 65.8
Thecc.08G097800 Theobroma cacao HOM05D000436 ORTHO05D001944 3.1e-07 58.2 69 37.7
Atru.chr8.2079 Acer truncatum HOM05D000436 ORTHO05D001944 4.1e-07 57.8 38 63.2
Cc06_g02150 Coffea canephora HOM05D000436 ORTHO05D001944 5.3e-07 57.4 38 63.2
Migut.J00272 Erythranthe guttata HOM05D000436 ORTHO05D001944 5.3e-07 57.4 38 60.5
Nitab4.5_0011665g0010 Nicotiana tabacum HOM05D000436 ORTHO05D001944 6.9e-07 57.0 51 51.0
Peaxi162Scf00318g00024 Petunia axillaris HOM05D000436 ORTHO05D001944 6.9e-07 57.0 42 64.3
AT1G21050 Arabidopsis thaliana HOM05D000436 ORTHO05D001944 9.1e-07 56.6 52 50.0
COL.COLO4_14712 Corchorus olitorius HOM05D000436 ORTHO05D001944 9.1e-07 56.6 42 64.3
Haze_20873 Corylus avellana HOM05D000436 ORTHO05D001944 9.1e-07 56.6 38 65.8
HanXRQChr04g0124551 Helianthus annuus HOM05D000436 ORTHO05D001944 9.1e-07 56.6 38 63.2
SGA_v2.0_scaffold85G26821 Striga asiatica HOM05D000436 ORTHO05D001944 9.1e-07 56.6 38 60.5
Duzib106G2012 Durio zibethinus HOM05D000436 ORTHO05D001944 1.2e-06 56.2 48 54.2
Gohir.A01G101366 Gossypium hirsutum HOM05D000436 ORTHO05D001944 1.2e-06 56.2 46 50.0
Gorai.002G112000 Gossypium raimondii HOM05D000436 ORTHO05D001944 1.2e-06 56.2 46 50.0
MD04G1137600 Malus domestica HOM05D000436 ORTHO05D001944 1.2e-06 56.2 52 55.8
MD12G1152400 Malus domestica HOM05D000436 ORTHO05D001944 1.2e-06 56.2 51 56.9
Manes.08G086100 Manihot esculenta HOM05D000436 ORTHO05D001944 1.2e-06 56.2 48 52.1
Cpa.g.sc36.101 Carica papaya HOM05D000436 ORTHO05D001944 1.5e-06 55.8 69 36.2
Cpa.g.sc56.51 Carica papaya HOM05D000436 ORTHO05D001944 1.5e-06 55.8 38 63.2
COL.COLO4_12267 Corchorus olitorius HOM05D000436 ORTHO05D001944 1.5e-06 55.8 69 36.2
Prupe.6G263600 Prunus persica HOM05D000436 ORTHO05D001944 1.5e-06 55.8 50 52.0
Aa31LG7G5190 Aethionema arabicum HOM05D000436 ORTHO05D001944 2.0e-06 55.5 46 56.5
AUR62036864 Chenopodium quinoa HOM05D000436 ORTHO05D001944 2.0e-06 55.5 36 66.7
Oeu053777.1 Olea europaea HOM05D000436 ORTHO05D001944 2.0e-06 55.5 36 63.9
Actinidia17096 Actinidia chinensis HOM05D000436 ORTHO05D001944 2.6e-06 55.1 58 43.1
Aqoxy5G00939 Aquilegia oxysepala HOM05D000436 ORTHO05D001944 2.6e-06 55.1 69 39.1
EL10Ac5g11595 Beta vulgaris HOM05D000436 ORTHO05D001944 2.6e-06 55.1 49 51.0
BraA01t03223Z Brassica rapa HOM05D031451 ORTHO05D026454 2.6e-06 55.1 31 80.6
Cfa017309 Carpinus fangiana HOM05D000436 ORTHO05D001944 2.6e-06 55.1 38 63.2
Eucgr.B02722 Eucalyptus grandis HOM05D000436 ORTHO05D001944 2.6e-06 55.1 46 60.9
Sc01g0004730 Simmondsia chinensis HOM05D000436 ORTHO05D001944 2.6e-06 55.1 40 60.0
BcaB07g32097 Brassica carinata HOM05D000436 ORTHO05D001944 3.4e-06 54.7 48 52.1
BcaC05g26012 Brassica carinata HOM05D000436 ORTHO05D001944 3.4e-06 54.7 48 52.1
A06p17080 Brassica napus HOM05D000436 ORTHO05D001944 3.4e-06 54.7 48 52.1
BraA06t24815Z Brassica rapa HOM05D000436 ORTHO05D001944 3.4e-06 54.7 48 52.1
CiPaw.09G200300 Carya illinoinensis HOM05D000436 ORTHO05D001944 3.4e-06 54.7 77 42.9
FAN14G5121 Fragaria x ananassa HOM05D000436 ORTHO05D001944 3.4e-06 54.7 38 60.5
Oeu042494.1 Olea europaea HOM05D000436 ORTHO05D001944 4.5e-06 54.3 52 50.0
Actinidia29174 Actinidia chinensis HOM05D000436 ORTHO05D001944 5.9e-06 53.9 38 63.2
Carub.0001s2050 Capsella rubella HOM05D000436 ORTHO05D001944 5.9e-06 53.9 48 52.1
CARHR021490 Cardamine hirsuta HOM05D000436 ORTHO05D001944 5.9e-06 53.9 47 53.2
MELO3C003172.2 Cucumis melo HOM05D000436 ORTHO05D001944 5.9e-06 53.9 42 64.3
Thhalv10008568m.g Eutrema salsugineum HOM05D000436 ORTHO05D001944 5.9e-06 53.9 48 52.1
FvH4_6g12850 Fragaria vesca HOM05D000436 ORTHO05D001944 5.9e-06 53.9 38 60.5
FAN09G0948 Fragaria x ananassa HOM05D000436 ORTHO05D001944 5.9e-06 53.9 38 60.5
RcHm_v2.0_Chr3g0464851 Rosa chinensis HOM05D000436 ORTHO05D001944 5.9e-06 53.9 38 60.5
TWI74G1143 Tripterygium wilfordii HOM05D000436 ORTHO05D001944 5.9e-06 53.9 45 57.8
AL1G34090 Arabidopsis lyrata HOM05D000436 ORTHO05D001944 7.7e-06 53.5 47 53.2
FAN05G2034 Fragaria x ananassa HOM05D000436 ORTHO05D001944 7.7e-06 53.5 38 57.9
Gohir.A09G153000 Gossypium hirsutum HOM05D000436 ORTHO05D001944 7.7e-06 53.5 38 55.3
Nn6g31567 Nelumbo nucifera HOM05D000436 ORTHO05D001944 7.7e-06 53.5 69 37.7
PSO170G6691 Papaver somniferum HOM05D000436 ORTHO05D001944 7.7e-06 53.5 47 51.1
Potri.006G091700 Populus trichocarpa HOM05D000436 ORTHO05D001944 7.7e-06 53.5 50 50.0
PGR031G2276 Punica granatum HOM05D000436 ORTHO05D001944 7.7e-06 53.5 36 61.1
Sabra06G0069300 Salix brachista HOM05D000436 ORTHO05D001944 7.7e-06 53.5 47 53.2
Sp1g18720 Schrenkiella parvula HOM05D000436 ORTHO05D001944 7.7e-06 53.5 48 50.0
TAR623G0070 Trochodendron aralioides HOM05D000436 ORTHO05D001944 7.7e-06 53.5 36 61.1


User provided reference genes

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