Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 0.0e+00 1164.4 608 100.0
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 5.6e-275 950.7 625 80.8
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 2.2e-271 938.7 623 80.6
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 5.6e-267 924.1 623 80.3
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.3e-266 922.9 617 80.1
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 5.3e-265 917.5 623 79.3
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 2.0e-264 915.6 614 79.6
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 7.6e-264 913.7 627 79.1
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 2.2e-263 912.1 625 78.4
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 8.4e-263 910.2 617 78.6
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 5.4e-262 907.5 624 79.3
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 7.9e-261 903.7 618 78.8
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 1.8e-260 902.5 617 78.9
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 1.9e-230 802.7 615 71.1
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 1.7e-199 699.9 622 63.3
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 7.8e-192 674.5 595 63.5
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 1.9e-190 669.8 599 63.3
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 3.6e-189 665.6 618 61.5
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 1.3e-186 657.1 642 60.0
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 6.4e-186 654.8 546 65.6
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 5.9e-184 648.3 633 59.6
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 1.7e-183 646.7 622 59.6
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 8.6e-183 644.4 626 59.4
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 8.6e-183 644.4 622 59.5
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 6.2e-181 638.3 638 58.5
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.0e-180 635.6 545 64.4
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 6.8e-180 634.8 654 57.6
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 2.0e-179 633.3 631 58.8
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 7.5e-179 631.3 644 57.3
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 4.9e-178 628.6 539 65.1
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.9e-177 626.7 568 61.3
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 9.2e-177 624.4 643 56.8
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 1.0e-175 620.9 606 57.9
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 4.3e-174 615.5 661 55.5
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 7.3e-174 614.8 596 57.7
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 1.1e-172 610.9 614 57.7
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 8.9e-172 607.8 539 62.9
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 2.6e-171 606.3 606 56.8
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 3.4e-171 605.9 623 56.2
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 5.8e-171 605.1 532 61.3
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 9.9e-171 604.4 581 59.4
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 3.7e-170 602.4 620 57.6
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 6.4e-170 601.7 549 60.1
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.1e-169 600.9 595 57.3
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 1.9e-169 600.1 622 55.9
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 9.2e-169 597.8 633 57.2
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 1.6e-168 597.0 549 59.7
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 2.1e-168 596.7 615 57.9
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 3.5e-168 595.9 536 61.6
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 1.0e-167 594.3 624 57.1
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 1.7e-167 593.6 638 56.4
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 2.3e-167 593.2 615 56.4
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 3.0e-167 592.8 571 58.1
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 6.6e-167 591.7 630 56.0
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 1.1e-166 590.9 608 57.9
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.1e-166 590.9 634 57.6
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 1.9e-166 590.1 525 60.8
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 1.9e-166 590.1 553 58.2
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 9.5e-166 587.8 602 57.0
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 1.6e-165 587.0 535 61.3
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 2.8e-165 586.3 547 60.0
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.2e-164 582.0 545 60.2
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 2.0e-163 580.1 543 61.0
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 4.4e-163 578.9 617 54.6
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 1.3e-162 577.4 603 56.9
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 1.4e-161 573.9 624 54.3
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 2.4e-161 573.2 638 54.7
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 1.6e-160 570.5 537 60.3
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 2.7e-160 569.7 628 54.6
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 3.5e-160 569.3 553 59.3
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 3.0e-159 566.2 541 59.0
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 2.1e-157 560.1 637 52.1
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 2.1e-157 560.1 605 55.9
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 1.2e-155 554.3 538 58.0
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 1.5e-155 553.9 561 57.0
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 7.8e-152 541.6 638 53.8
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 3.3e-150 536.2 589 54.3
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 2.6e-147 526.6 575 52.9
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 1.2e-144 517.7 575 53.2
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 7.1e-137 491.9 573 54.8
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 1.2e-136 491.1 461 59.9
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 8.4e-130 468.4 467 57.6
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 2.5e-129 466.8 525 56.0
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 1.1e-126 458.0 530 51.1
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 9.7e-118 428.3 472 56.1
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 5.0e-114 416.0 543 44.9
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 7.2e-113 412.1 576 45.3
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.4e-105 387.9 457 53.0
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 7.2e-105 385.6 463 54.2
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 3.7e-101 373.2 414 57.5
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 6.5e-98 362.5 380 60.0
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 6.5e-98 362.5 313 61.7
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 7.2e-97 359.0 380 59.5
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 7.5e-94 349.0 466 48.3
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 2.4e-84 317.4 381 50.7
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.7e-78 296.2 433 43.6
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 6.8e-71 272.7 573 34.7
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 1.2e-54 218.8 288 49.0
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 1.1e-49 202.2 163 66.3
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 1.1e-49 202.2 523 32.7
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 7.1e-36 156.4 138 59.4
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 2.7e-35 154.5 138 58.7
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 5.6e-33 146.7 97 69.1
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.5e-30 138.7 137 55.5
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 9.9e-30 136.0 122 59.0
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 8.4e-29 132.9 349 29.2
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 4.2e-28 130.6 95 69.5
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.6e-24 118.6 161 43.5
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 3.0e-18 97.8 119 47.9
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.1e-17 95.9 53 83.0
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 1.2e-14 85.9 124 46.0
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 4.9e-13 80.5 163 37.4
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 6.5e-13 80.1 189 29.6


User provided reference genes

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