Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 5.7e-113 411.0 217 100.0
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.2e-91 340.1 229 79.9
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 1.7e-69 266.5 195 69.7
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 1.2e-62 243.8 170 74.1
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 1.2e-62 243.8 160 77.5
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 2.7e-62 242.7 170 72.4
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 4.6e-62 241.9 168 73.2
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 1.9e-60 236.5 170 71.8
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 7.3e-60 234.6 200 64.5
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 9.6e-60 234.2 175 70.3
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 4.7e-59 231.9 167 71.3
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 6.9e-58 228.0 209 61.2
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 1.2e-57 227.3 170 70.0
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 1.5e-57 226.9 172 68.6
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 5.8e-49 198.4 197 54.8
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 1.3e-48 197.2 138 72.5
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.2e-48 196.4 155 63.2
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 3.8e-48 195.7 168 59.5
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.8e-48 195.7 147 66.0
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 4.9e-48 195.3 146 69.9
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 6.4e-48 194.9 187 56.7
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 1.4e-47 193.7 162 62.3
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 1.4e-47 193.7 124 76.6
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.4e-47 193.7 147 65.3
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 5.4e-47 191.8 138 68.8
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 5.4e-47 191.8 160 61.2
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 5.4e-47 191.8 160 61.2
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 5.4e-47 191.8 199 53.8
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 9.3e-47 191.0 126 73.8
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 9.3e-47 191.0 160 62.5
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 1.2e-46 190.7 203 54.2
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 1.2e-46 190.7 168 57.7
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 1.6e-46 190.3 200 52.5
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 1.6e-46 190.3 147 68.0
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 2.1e-46 189.9 179 57.0
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.7e-46 189.5 160 60.6
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 2.7e-46 189.5 163 62.0
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 2.7e-46 189.5 182 55.5
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 3.5e-46 189.1 189 55.0
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 6.0e-46 188.3 139 67.6
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 6.0e-46 188.3 153 64.1
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 6.0e-46 188.3 168 57.1
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 1.0e-45 187.6 127 73.2
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 1.3e-45 187.2 146 66.4
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 1.3e-45 187.2 210 53.8
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 1.8e-45 186.8 159 60.4
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 1.8e-45 186.8 156 62.8
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 2.3e-45 186.4 148 64.2
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 2.3e-45 186.4 148 64.2
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 5.1e-45 185.3 119 74.8
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 5.1e-45 185.3 151 63.6
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 8.7e-45 184.5 124 73.4
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 8.7e-45 184.5 146 65.8
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 1.1e-44 184.1 197 50.3
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 1.5e-44 183.7 159 61.0
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 2.5e-44 183.0 145 66.2
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 4.3e-44 182.2 159 61.0
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 7.4e-44 181.4 139 64.7
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 9.6e-44 181.0 162 58.0
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 1.6e-43 180.3 199 51.3
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 2.8e-43 179.5 139 64.7
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 1.4e-42 177.2 192 52.6
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 1.4e-42 177.2 138 65.2
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 4.0e-42 175.6 175 52.6
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 5.3e-42 175.3 140 62.1
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.2e-41 174.1 130 64.6
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 1.5e-41 173.7 157 57.3
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 2.0e-41 173.3 125 68.0
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 2.9e-40 169.5 188 52.7
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 3.8e-40 169.1 182 50.0
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 1.6e-38 163.7 120 66.7
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.3e-37 160.6 115 69.6
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 1.3e-37 160.6 122 63.1
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 2.3e-37 159.8 130 60.8
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 1.9e-36 156.8 149 54.4
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 2.8e-35 152.9 143 54.5
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 4.8e-35 152.1 126 58.7
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 6.2e-35 151.8 83 95.2
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 4.0e-34 149.1 98 71.4
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 2.0e-33 146.7 85 82.4
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 1.0e-32 144.4 108 66.7
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 1.4e-31 140.6 124 56.5
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 1.4e-31 140.6 95 73.7
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 2.5e-31 139.8 92 73.9
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 2.1e-30 136.7 178 47.8
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 2.1e-30 136.7 127 56.7
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 1.3e-27 127.5 124 55.6
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 3.7e-27 125.9 102 62.7
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 1.8e-26 123.6 101 64.4
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.1e-26 122.5 83 72.3
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 9.0e-26 121.3 127 49.6
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.6e-25 119.8 111 56.8
Aa31sc19G70 Aethionema arabicum HOM05D007159 ORTHO05D009068 7.6e-25 118.2 65 84.6
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 1.0e-24 117.9 71 74.6
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 5.0e-24 115.5 159 44.7
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 6.5e-24 115.2 152 46.1
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.0e-21 106.3 147 44.2
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 1.1e-18 97.8 80 60.0
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.3e-16 90.9 159 38.4
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 3.8e-16 89.4 53 81.1
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 4.2e-15 85.9 92 51.1
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 5.5e-15 85.5 62 67.7
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 1.0e-13 81.3 150 38.7
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 6.7e-13 78.6 70 60.0
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 1.1e-12 77.8 40 90.0
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 1.1e-12 77.8 129 38.8
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 4.8e-11 72.4 128 38.3
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 6.3e-11 72.0 161 32.9
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 5.3e-10 68.9 152 32.2
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 2.6e-09 66.6 124 33.1
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 2.6e-09 66.6 112 35.7
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 4.5e-09 65.9 165 31.5
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 7.7e-09 65.1 123 33.3
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 1.3e-08 64.3 109 34.9
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 2.2e-08 63.5 140 31.4
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 2.2e-08 63.5 126 30.2
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 2.2e-08 63.5 133 31.6
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 3.8e-08 62.8 117 31.6
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 6.5e-08 62.0 135 31.9
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 6.5e-08 62.0 122 33.6
PGR031G3920 Punica granatum HOM05D009116 ORTHO05D011299 1.4e-07 60.8 109 33.9
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 1.9e-07 60.5 117 33.3
PGSC0003DMG400027028 Solanum tuberosum HOM05D009116 ORTHO05D011299 4.2e-07 59.3 171 28.1
CAN.G65.136 Capsicum annuum HOM05D009116 ORTHO05D011299 5.5e-07 58.9 123 30.9
Solyc06g072930.4 Solanum lycopersicum HOM05D009116 ORTHO05D011299 9.4e-07 58.2 138 29.7
Sopen06g029290 Solanum pennellii HOM05D009116 ORTHO05D011299 9.4e-07 58.2 138 29.7
EL10Ac1g00288 Beta vulgaris HOM05D009116 ORTHO05D011299 1.6e-06 57.4 196 27.6
Aa31sc26G70 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.7e-06 56.6 43 69.8


User provided reference genes

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