Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.8e-59 232.3 110 100.0
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.8e-59 232.3 110 100.0
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.0e-45 185.7 108 80.6
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 7.5e-45 183.7 110 79.1
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 9.8e-45 183.3 110 78.2
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 1.3e-44 183.0 110 78.2
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.3e-44 183.0 110 77.3
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 2.2e-44 182.2 110 80.0
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 3.7e-44 181.4 110 77.3
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 3.7e-44 181.4 110 77.3
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 4.9e-44 181.0 110 77.3
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 4.9e-44 181.0 110 77.3
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-43 179.9 110 75.5
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-43 179.9 110 75.5
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-43 179.9 110 75.5
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 1.1e-43 179.9 110 75.5
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 1.1e-43 179.9 110 75.5
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 1.4e-43 179.5 110 76.4
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.7e-42 175.3 108 76.9
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 3.3e-40 168.3 110 73.6
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 1.5e-37 159.5 98 75.5
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 7.5e-29 130.6 117 58.1
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.2e-28 129.0 115 63.5
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 2.9e-28 128.6 111 59.5
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 4.9e-28 127.9 115 63.5
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 6.4e-28 127.5 111 58.6
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 6.4e-28 127.5 111 58.6
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 8.3e-28 127.1 110 56.4
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 3.2e-27 125.2 110 55.5
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 3.2e-27 125.2 119 54.6
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 3.2e-27 125.2 111 60.4
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 4.1e-27 124.8 111 55.9
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 5.4e-27 124.4 124 54.0
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 7.1e-27 124.0 110 53.6
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.2e-26 123.2 110 55.5
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 1.2e-26 123.2 116 56.0
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 1.2e-26 123.2 116 56.0
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 2.1e-26 122.5 126 54.0
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 3.5e-26 121.7 118 58.5
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 6.0e-26 120.9 111 55.9
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 6.0e-26 120.9 120 56.7
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 6.0e-26 120.9 113 55.8
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 1.3e-25 119.8 117 56.4
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 3.0e-25 118.6 121 54.5
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 6.6e-25 117.5 115 53.9
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 6.6e-25 117.5 108 56.5
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 8.6e-25 117.1 121 53.7
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 8.6e-25 117.1 122 55.7
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 1.1e-24 116.7 120 53.3
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 1.5e-24 116.3 119 53.8
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 1.9e-24 115.9 116 54.3
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 1.9e-24 115.9 119 50.4
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 1.9e-24 115.9 116 55.2
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 1.9e-24 115.9 106 56.6
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 2.5e-24 115.5 114 57.0
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 2.5e-24 115.5 122 54.1
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 2.5e-24 115.5 115 54.8
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 5.6e-24 114.4 119 53.8
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 5.6e-24 114.4 118 54.2
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 7.3e-24 114.0 123 54.5
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 7.3e-24 114.0 122 51.6
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 7.3e-24 114.0 116 53.4
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 1.2e-23 113.2 106 55.7
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 1.2e-23 113.2 122 54.1
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 1.6e-23 112.8 117 51.3
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 1.6e-23 112.8 125 50.4
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 2.1e-23 112.5 116 53.4
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 2.1e-23 112.5 114 56.1
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 2.1e-23 112.5 115 52.2
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 2.8e-23 112.1 121 52.1
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 2.8e-23 112.1 117 54.7
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 2.8e-23 112.1 110 54.5
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 4.7e-23 111.3 114 50.9
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 4.7e-23 111.3 120 55.8
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 4.7e-23 111.3 120 55.8
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 4.7e-23 111.3 119 48.7
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 4.7e-23 111.3 118 46.6
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 4.7e-23 111.3 118 46.6
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 6.2e-23 110.9 101 56.4
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 6.2e-23 110.9 117 58.1
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 6.2e-23 110.9 118 45.8
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 8.1e-23 110.5 120 55.0
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 1.1e-22 110.2 115 53.9
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.4e-22 109.8 108 51.9
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.4e-22 109.8 108 51.9
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.4e-22 109.8 108 56.5
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.4e-22 109.8 108 56.5
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.4e-22 109.8 121 50.4
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.4e-22 109.8 121 50.4
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 1.8e-22 109.4 119 51.3
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 1.8e-22 109.4 110 55.5
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 2.4e-22 109.0 126 50.0
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 2.4e-22 109.0 125 46.4
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 4.0e-22 108.2 122 52.5
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 5.2e-22 107.8 99 55.6
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 6.8e-22 107.5 103 55.3
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 6.8e-22 107.5 111 53.2
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 1.2e-21 106.7 115 49.6
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 1.2e-21 106.7 106 51.9
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 1.2e-21 106.7 117 53.8
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 1.5e-21 106.3 116 51.7
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 1.5e-21 106.3 116 52.6
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 2.0e-21 105.9 110 49.1
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 2.0e-21 105.9 111 55.0
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 2.6e-21 105.5 109 50.5
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.6e-21 105.5 109 50.5
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 3.4e-21 105.1 109 50.5
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 3.4e-21 105.1 118 45.8
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 4.4e-21 104.8 104 52.9
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 5.8e-21 104.4 114 50.0
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 5.8e-21 104.4 117 53.0
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 7.6e-21 104.0 102 59.8
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 1.3e-20 103.2 119 49.6
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 1.3e-20 103.2 114 47.4
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 1.3e-20 103.2 119 48.7
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 1.3e-20 103.2 114 53.5
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 1.7e-20 102.8 114 53.5
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 2.2e-20 102.4 114 49.1
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 2.2e-20 102.4 114 49.1
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 2.2e-20 102.4 114 49.1
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 3.8e-20 101.7 102 56.9
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.8e-20 101.7 118 50.0
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 3.8e-20 101.7 115 48.7
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 3.8e-20 101.7 110 52.7
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 6.4e-20 100.9 110 48.2
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 6.4e-20 100.9 103 54.4
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 8.4e-20 100.5 110 50.0
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 8.4e-20 100.5 110 50.0
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 1.1e-19 100.1 120 52.5
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 1.9e-19 99.4 110 48.2
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 2.4e-19 99.0 118 51.7
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 4.1e-19 98.2 105 53.3
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 4.1e-19 98.2 111 50.5
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 4.1e-19 98.2 117 53.0
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 5.4e-19 97.8 117 47.9
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 5.4e-19 97.8 110 48.2
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 7.1e-19 97.4 107 51.4
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 7.1e-19 97.4 110 44.5
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 9.2e-19 97.1 123 48.0
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 1.2e-18 96.7 121 46.3
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.2e-18 96.7 102 53.9
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 1.6e-18 96.3 122 50.0
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 2.1e-18 95.9 125 46.4
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 3.5e-18 95.1 118 47.5
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 4.6e-18 94.7 109 52.3
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 7.8e-18 94.0 108 50.9
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 1.0e-17 93.6 65 64.6
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 1.0e-17 93.6 106 51.9
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 1.0e-17 93.6 122 43.4
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 1.7e-17 92.8 110 49.1
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 2.3e-17 92.4 110 50.0
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 3.0e-17 92.0 98 53.1
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 3.0e-17 92.0 126 41.3
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 3.9e-17 91.7 117 45.3
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 5.1e-17 91.3 118 43.2
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 5.1e-17 91.3 113 46.0
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 1.5e-16 89.7 95 49.5
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 1.5e-16 89.7 104 48.1
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 7.3e-16 87.4 119 39.5
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 7.3e-16 87.4 120 42.5
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 9.6e-16 87.0 104 50.0
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 1.2e-15 86.7 107 48.6
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 2.1e-15 85.9 98 45.9
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 3.6e-15 85.1 108 50.0
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 3.6e-15 85.1 132 40.9
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 1.8e-14 82.8 108 46.3
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 6.9e-14 80.9 55 65.5
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 1.5e-13 79.7 108 42.6
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 1.7e-12 76.3 127 41.7
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 8.4e-12 73.9 91 47.3
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 1.1e-11 73.6 88 47.7
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.1e-11 73.6 145 33.1
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 1.9e-11 72.8 153 34.6
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 5.4e-11 71.2 118 39.0
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 9.3e-11 70.5 105 36.2
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 6.0e-10 67.8 135 34.1
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 3.9e-09 65.1 98 43.9
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 8.1e-07 57.4 145 31.0


User provided reference genes

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