Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 2.6e-152 542.0 266 100.0
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 1.8e-105 386.3 266 71.1
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 1.2e-101 373.6 257 70.8
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 5.7e-99 364.8 266 68.0
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 1.3e-98 363.6 257 70.0
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 1.1e-97 360.5 257 69.6
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 2.0e-96 356.3 256 68.8
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 4.7e-93 345.1 256 66.4
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 1.8e-92 343.2 256 66.0
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 1.8e-92 343.2 256 66.0
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 1.2e-91 340.5 256 65.6
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 5.8e-91 338.2 270 64.8
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 2.2e-90 336.3 254 65.4
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 6.0e-88 328.2 278 59.7
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 6.2e-77 291.6 275 55.3
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 8.1e-77 291.2 254 57.9
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 6.8e-76 288.1 252 58.7
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.3e-74 283.9 249 55.0
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 2.2e-74 283.1 254 54.7
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 2.2e-74 283.1 254 54.7
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 3.8e-74 282.3 257 54.1
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 8.4e-74 281.2 264 55.7
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 4.1e-73 278.9 256 54.7
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 5.4e-73 278.5 253 53.4
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 7.1e-73 278.1 252 55.6
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 9.2e-73 277.7 256 54.7
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 3.5e-72 275.8 273 52.4
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 1.7e-71 273.5 272 52.6
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 2.3e-71 273.1 253 54.2
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 8.6e-71 271.2 270 51.5
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 8.6e-71 271.2 254 54.3
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 3.3e-70 269.2 256 55.1
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 1.6e-69 266.9 255 54.1
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 1.6e-69 266.9 249 53.8
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 1.8e-68 263.5 249 51.8
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 4.0e-68 262.3 236 51.3
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 4.0e-68 262.3 264 51.1
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 4.0e-68 262.3 254 52.8
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 5.2e-68 261.9 250 52.0
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 1.2e-67 260.8 250 50.8
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 1.5e-67 260.4 263 51.0
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 3.4e-67 259.2 255 51.8
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 3.4e-67 259.2 249 50.2
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 4.9e-66 255.4 248 51.2
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 1.1e-65 254.2 257 49.8
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 1.9e-65 253.4 262 48.1
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 2.4e-65 253.1 254 52.4
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 4.2e-65 252.3 256 50.0
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 1.2e-64 250.8 287 47.4
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 3.5e-64 249.2 275 47.3
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 3.5e-64 249.2 253 47.8
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 2.3e-63 246.5 270 48.5
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 3.0e-63 246.1 239 51.0
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 5.1e-63 245.4 236 52.5
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.9e-62 243.4 231 53.7
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 3.3e-62 242.7 254 51.6
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 2.1e-61 240.0 250 48.8
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 2.8e-61 239.6 275 46.9
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 4.8e-61 238.8 235 51.1
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 3.1e-60 236.1 256 47.7
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 9.0e-60 234.6 224 52.7
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 1.2e-59 234.2 234 48.3
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 3.4e-59 232.6 257 48.6
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 4.5e-59 232.3 255 47.1
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 7.6e-59 231.5 294 43.5
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 9.9e-59 231.1 264 45.1
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 4.2e-57 225.7 272 46.3
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 5.4e-57 225.3 212 55.2
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.2e-56 224.2 213 53.5
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 1.2e-56 224.2 241 46.5
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 8.7e-55 218.0 200 53.5
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 2.1e-53 213.4 219 51.6
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 2.8e-53 213.0 200 54.0
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.1e-52 211.1 234 43.6
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 1.4e-52 210.7 248 46.4
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 3.4e-51 206.1 196 52.0
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 2.2e-50 203.4 238 43.7
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 2.4e-49 199.9 257 43.6
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 4.2e-49 199.1 250 39.6
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 2.7e-48 196.4 321 37.4
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 2.5e-46 189.9 234 42.3
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 2.8e-45 186.4 246 43.5
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 6.2e-45 185.3 177 53.1
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.1e-44 184.5 246 41.9
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 1.4e-44 184.1 179 50.8
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 5.8e-43 178.7 270 41.1
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.3e-42 177.6 213 46.9
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 3.8e-42 176.0 248 39.9
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 4.3e-38 162.5 248 40.7
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 3.7e-37 159.5 142 54.9
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 5.9e-35 152.1 235 35.7
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 1.2e-27 127.9 157 44.6
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 2.0e-27 127.1 267 32.6
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 5.5e-25 119.0 156 42.9
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 6.7e-23 112.1 212 36.3
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 1.3e-21 107.8 200 30.5
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 4.8e-21 105.9 137 46.0
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 6.3e-21 105.5 245 30.2
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 1.1e-17 94.7 246 30.5
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 7.2e-17 92.0 168 33.9
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 6.1e-16 89.0 136 39.0
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.4e-15 87.8 237 31.6
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.6e-11 74.3 75 49.3
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 5.9e-11 72.4 108 37.0


User provided reference genes

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