Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 1.5e-217 759.2 391 100.0
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 1.9e-191 672.5 394 89.1
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 4.2e-191 671.4 393 88.5
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 9.4e-191 670.2 393 87.5
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 2.3e-189 665.6 393 87.8
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 4.1e-186 654.8 393 87.5
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 1.3e-184 649.8 392 86.7
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 1.3e-184 649.8 392 86.7
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 2.2e-184 649.0 392 86.5
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 2.1e-182 642.5 392 85.7
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 8.0e-182 640.6 392 85.5
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 1.4e-181 639.8 392 84.7
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 4.2e-175 618.2 395 82.3
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 2.3e-173 612.5 392 83.2
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 4.3e-159 565.1 374 79.7
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 2.0e-156 556.2 398 75.1
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 4.4e-156 555.1 398 75.6
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 5.8e-156 554.7 383 76.2
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 1.7e-155 553.1 396 74.2
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 2.2e-155 552.7 396 74.5
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 8.3e-155 550.8 360 79.4
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.1e-154 550.4 398 74.6
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 2.4e-154 549.3 390 74.9
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 4.1e-154 548.5 395 73.4
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.9e-151 539.7 390 72.1
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 3.3e-151 538.9 360 78.3
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 1.2e-150 537.0 390 71.8
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 3.6e-150 535.4 390 71.5
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 6.2e-150 534.6 383 72.6
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 8.1e-150 534.3 363 75.5
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 8.1e-150 534.3 346 80.9
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 8.1e-150 534.3 397 71.3
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 8.1e-150 534.3 374 74.3
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.4e-149 533.5 374 73.0
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.4e-149 533.5 374 73.0
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 1.8e-149 533.1 362 76.2
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 2.3e-149 532.7 363 75.2
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 3.1e-149 532.3 384 72.7
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 4.0e-149 531.9 368 75.5
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 3.4e-148 528.9 390 73.3
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 7.5e-148 527.7 371 74.7
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 7.5e-148 527.7 391 72.6
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 7.5e-148 527.7 366 74.6
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 9.8e-148 527.3 397 71.5
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 1.7e-147 526.6 348 78.2
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 2.9e-147 525.8 375 72.8
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 3.7e-147 525.4 392 72.7
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 1.1e-146 523.9 382 71.7
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 3.2e-146 522.3 346 77.7
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 4.1e-146 521.9 393 70.7
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 5.4e-146 521.5 384 73.2
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 9.2e-146 520.8 364 75.3
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 2.1e-145 519.6 363 75.5
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 7.8e-145 517.7 409 68.7
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 1.0e-144 517.3 377 71.9
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 1.9e-143 513.1 363 74.7
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 4.3e-143 511.9 383 72.1
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 1.6e-142 510.0 394 69.5
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 2.8e-142 509.2 346 75.7
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 2.8e-142 509.2 381 72.4
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 6.2e-142 508.1 368 72.8
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 2.3e-141 506.1 398 70.6
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 3.1e-141 505.8 351 74.6
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 4.0e-141 505.4 398 70.1
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 6.8e-141 504.6 404 66.3
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 4.4e-140 501.9 352 75.6
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 5.8e-140 501.5 351 74.1
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 9.9e-140 500.7 386 69.9
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 3.7e-139 498.8 351 73.8
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 4.9e-139 498.4 385 70.6
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 4.1e-138 495.4 392 69.9
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 3.5e-137 492.3 402 68.7
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 4.6e-137 491.9 383 70.0
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 7.3e-135 484.6 345 75.1
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 1.6e-134 483.4 343 74.6
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 1.6e-134 483.4 373 69.4
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 6.8e-133 478.0 314 79.3
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 2.6e-132 476.1 385 66.0
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 9.9e-132 474.2 318 75.8
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 2.2e-131 473.0 371 69.5
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 2.9e-131 472.6 352 71.6
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 6.4e-131 471.5 367 70.0
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 3.2e-130 469.2 351 68.1
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 3.9e-128 462.2 296 80.4
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 1.1e-127 460.7 352 70.5
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 1.5e-127 460.3 318 72.3
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 2.1e-126 456.4 298 77.9
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 2.8e-126 456.1 368 67.7
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 8.1e-126 454.5 319 72.4
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 3.8e-123 445.7 326 71.2
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 7.9e-121 438.0 301 75.7
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 4.3e-119 432.2 423 59.6
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 3.5e-113 412.5 380 61.1
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 1.3e-112 410.6 285 73.0
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 1.2e-100 370.9 326 59.2
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 2.2e-99 366.7 239 78.2
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 2.2e-94 350.1 496 48.6
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 7.4e-87 325.1 295 67.8
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 1.1e-82 311.2 427 48.9
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 5.5e-82 308.9 282 66.3
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 5.1e-80 302.4 241 68.9
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 1.1e-77 294.7 291 57.7
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 1.4e-77 294.3 326 46.6
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 1.4e-77 294.3 201 73.1
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 4.1e-77 292.7 317 49.5
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 5.5e-74 282.3 327 45.9
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 3.0e-72 276.6 252 57.1
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 7.0e-69 265.4 907 28.7
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 2.2e-62 243.8 158 77.2
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 2.4e-53 213.8 143 77.6
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 1.2e-49 201.4 128 82.0
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 4.4e-47 193.0 157 67.5
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 1.9e-42 177.6 177 59.9
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 1.4e-40 171.4 117 76.1
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 3.6e-33 146.7 325 33.5
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 1.2e-23 115.2 82 70.7
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 4.9e-14 83.2 46 84.8
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 4.2e-13 80.1 48 81.2
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 9.3e-13 79.0 260 26.5
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 1.2e-12 78.6 81 53.1
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 1.0e-11 75.5 274 28.1
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 5.1e-11 73.2 49 71.4
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 2.6e-07 60.8 74 48.6
MD05G1159400 Malus domestica HOM05D006407 ORTHO05D008079 2.9e-06 57.4 64 48.4


User provided reference genes

Program Settings