Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc46G40 Aethionema arabicum HOM05D005863 ORTHO05D003355 8.5e-124 447.2 256 100.0
Aa31sc26G90 Aethionema arabicum HOM05D005863 ORTHO05D003355 1.0e-100 370.5 262 86.3
Duzib268G1590 Durio zibethinus HOM05D005863 ORTHO05D003355 1.8e-12 77.4 107 33.6
Duzib251G0242 Durio zibethinus HOM05D005863 ORTHO05D003355 2.3e-12 77.0 107 33.6
Lalb_Chr23g0277781 Lupinus albus HOM05D013281 ORTHO05D003355 6.7e-12 75.5 80 38.8
QL03p055923 Quercus lobata HOM05D005863 ORTHO05D003355 1.5e-11 74.3 130 31.5
TAR629G1344 Trochodendron aralioides HOM05D005863 ORTHO05D003355 1.5e-11 74.3 105 34.3
MELO3C010709.2 Cucumis melo HOM05D005863 ORTHO05D003355 2.0e-11 73.9 97 37.1
Gorai.005G174200 Gossypium raimondii HOM05D005863 ORTHO05D003355 2.0e-11 73.9 94 34.0
Thecc.02G268600 Theobroma cacao HOM05D005863 ORTHO05D003355 2.5e-11 73.6 94 33.0
Dinv14763 Davidia involucrata HOM05D005863 ORTHO05D003355 4.3e-11 72.8 102 30.4
Manes.12G018600 Manihot esculenta HOM05D005863 ORTHO05D003355 4.3e-11 72.8 91 33.0
Gohir.A03G131400 Gossypium hirsutum HOM05D005863 ORTHO05D003355 5.7e-11 72.4 94 33.0
Haze_12305 Corylus avellana HOM05D005863 ORTHO05D003355 9.7e-11 71.6 130 30.8
COL.COLO4_23547 Corchorus olitorius HOM05D005863 ORTHO05D003355 1.3e-10 71.2 107 31.8
Glyma.11G245500 Glycine max HOM05D013281 ORTHO05D003355 1.7e-10 70.9 91 35.2
HanXRQChr01g0023571 Helianthus annuus HOM05D005863 ORTHO05D003355 1.7e-10 70.9 87 35.6
Rhsim12G0037600 Rhododendron simsii HOM05D005863 ORTHO05D003355 2.2e-10 70.5 149 28.9
TWI36G0003 Tripterygium wilfordii HOM05D005863 ORTHO05D003355 2.2e-10 70.5 107 32.7
CsaV3_2G025110 Cucumis sativus L. HOM05D005863 ORTHO05D003355 2.8e-10 70.1 94 35.1
Medtr3g086220 Medicago truncatula HOM05D013281 ORTHO05D003355 2.8e-10 70.1 87 33.3
Cpa.g.sc369.6 Carica papaya HOM05D005863 ORTHO05D003355 3.7e-10 69.7 106 34.0
Manes.13G019100 Manihot esculenta HOM05D005863 ORTHO05D003355 3.7e-10 69.7 124 27.4
Prupe.1G239400 Prunus persica HOM05D005863 ORTHO05D017031 4.8e-10 69.3 78 34.6
THA.LOC104807749 Tarenaya hassleriana HOM05D008497 ORTHO05D003355 4.8e-10 69.3 93 32.3
CiPaw.11G070600 Carya illinoinensis HOM05D005863 ORTHO05D003355 6.3e-10 68.9 95 34.7
Ciclev10030561m.g Citrus clementina HOM05D005863 ORTHO05D003355 6.3e-10 68.9 96 33.3
Thhalv10023229m.g Eutrema salsugineum HOM05D008497 ORTHO05D003355 8.2e-10 68.6 198 30.8
GSVIVG01000596001 Vitis vinifera HOM05D005863 ORTHO05D003355 8.2e-10 68.6 90 33.3
vmacro01106 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 1.1e-09 68.2 81 33.3
Lsat_1_v5_gn_8_150460 Lactuca sativa HOM05D005863 ORTHO05D003355 1.4e-09 67.8 102 32.4
Sabra10G0018100 Salix brachista HOM05D005863 ORTHO05D003355 1.4e-09 67.8 98 33.7
Sc14g0008880 Simmondsia chinensis HOM05D005863 ORTHO05D003355 1.4e-09 67.8 89 33.7
TPR.G14234 Trifolium pratense HOM05D013281 ORTHO05D003355 1.4e-09 67.8 86 34.9
Nn4g22491 Nelumbo nucifera HOM05D005863 ORTHO05D003355 1.8e-09 67.4 96 29.2
Potri.010G052200 Populus trichocarpa HOM05D005863 ORTHO05D003355 1.8e-09 67.4 90 33.3
THA.LOC104825539 Tarenaya hassleriana HOM05D005863 ORTHO05D003355 2.4e-09 67.0 86 32.6
Lalb_Chr11g0075601 Lupinus albus HOM05D005863 ORTHO05D003355 5.3e-09 65.9 80 33.8
Nitab4.5_0007393g0020 Nicotiana tabacum HOM05D012928 ORTHO05D003355 5.3e-09 65.9 81 35.8
ClCG08G017500 Citrullus lanatus HOM05D005863 ORTHO05D003355 9.1e-09 65.1 136 30.9
Lj6A818T39 Lonicera japonica HOM05D005863 ORTHO05D003355 9.1e-09 65.1 93 29.0
Sed0020016 Sechium edule HOM05D005863 ORTHO05D003355 1.5e-08 64.3 96 33.3
Atru.chr11.2201 Acer truncatum HOM05D005863 ORTHO05D003355 2.0e-08 63.9 109 31.2
DCAR_024069 Daucus carota HOM05D005863 ORTHO05D003355 2.0e-08 63.9 145 29.0
MD16G1107000 Malus domestica HOM05D005863 ORTHO05D017031 2.0e-08 63.9 81 33.3
PGR102G1092 Punica granatum HOM05D005863 ORTHO05D003355 2.6e-08 63.5 91 30.8
Sp7g05260 Schrenkiella parvula HOM05D008497 ORTHO05D003355 2.6e-08 63.5 144 28.5
AT4G00920 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 3.4e-08 63.2 184 31.0
Glyma.18G011700 Glycine max HOM05D013281 ORTHO05D003355 4.5e-08 62.8 80 33.8
Psat5g094240 Pisum sativum HOM05D013281 ORTHO05D003355 4.5e-08 62.8 168 27.4
AT5G37190 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 5.9e-08 62.4 175 29.7
Nitab4.5_0000041g0190 Nicotiana tabacum HOM05D012928 ORTHO05D003355 5.9e-08 62.4 81 34.6
VMungo1383G2020 Vigna mungo HOM05D013281 ORTHO05D003355 5.9e-08 62.4 82 31.7
HanXRQChr08g0208041 Helianthus annuus HOM05D005863 ORTHO05D003355 7.7e-08 62.0 105 26.7
AT2G01800 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 1.0e-07 61.6 143 32.2
SalBow2G2700 Salvia bowleyana HOM05D005863 ORTHO05D003355 1.0e-07 61.6 83 30.1
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 1.3e-07 61.2 69 37.7
MBI14_g22553_MAGBIO Magnolia biondii HOM05D005863 ORTHO05D003355 1.7e-07 60.8 95 30.5
PSO017G4976 Papaver somniferum HOM05D040514 ORTHO05D003355 1.7e-07 60.8 81 29.6
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 1.7e-07 60.8 81 32.1
PGR031G1574 Punica granatum HOM05D005863 ORTHO05D003355 1.7e-07 60.8 96 28.1
Aqoxy3G01339 Aquilegia oxysepala HOM05D005863 ORTHO05D003355 2.9e-07 60.1 100 29.0
Lj4g0027725 Lotus japonicus HOM05D013281 ORTHO05D003355 5.0e-07 59.3 88 27.3
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 6.5e-07 58.9 83 30.1
AT4G00930 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 8.5e-07 58.5 170 28.2
C09p18810 Brassica napus HOM05D008497 ORTHO05D003355 8.5e-07 58.5 90 34.4
Peaxi162Scf00128g00645 Petunia axillaris HOM05D012928 ORTHO05D003355 8.5e-07 58.5 104 27.9
AL7G45710 Arabidopsis lyrata HOM05D008497 ORTHO05D003355 2.5e-06 57.0 163 30.7
Carub.0007s3238 Capsella rubella HOM05D008497 ORTHO05D003355 2.5e-06 57.0 159 27.0
vmacro09646 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 2.5e-06 57.0 80 28.8
Ah.03g133620 Amaranthus hybridus HOM05D001489 ORTHO05D001380 4.2e-06 56.2 79 30.4
MSTRG.7960 Avicennia marina HOM05D005863 ORTHO05D003355 4.2e-06 56.2 89 29.2
Nitab4.5_0011762g0010 Nicotiana tabacum HOM05D012928 ORTHO05D003355 5.5e-06 55.8 157 27.4
arahy.Tifrunner.gnm1.ann1.11ED70 Arachis hypogaea HOM05D005863 ORTHO05D003355 9.4e-06 55.1 91 25.3
CARHR215860 Cardamine hirsuta HOM05D008497 ORTHO05D003355 9.4e-06 55.1 157 30.6


User provided reference genes

Program Settings