Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc461G10 Aethionema arabicum HOM05D000536 ORTHO05D001213 2.2e-77 292.4 158 100.0
AL6G31660 Arabidopsis lyrata HOM05D000536 ORTHO05D001213 7.7e-43 177.6 158 72.8
BraA03t10298Z Brassica rapa HOM05D000536 ORTHO05D001213 4.2e-41 171.8 161 68.9
A03p09830 Brassica napus HOM05D000536 ORTHO05D001213 5.5e-41 171.4 160 67.5
AT5G20110 Arabidopsis thaliana HOM05D000536 ORTHO05D001213 7.2e-41 171.0 160 70.6
CARHR192720 Cardamine hirsuta HOM05D000536 ORTHO05D001213 7.2e-41 171.0 163 66.9
Thhalv10014655m.g Eutrema salsugineum HOM05D000536 ORTHO05D001213 1.5e-38 163.3 163 68.1
C03p11410 Brassica napus HOM05D000536 ORTHO05D001213 1.8e-36 156.4 162 64.8
Carub.0006s1849 Capsella rubella HOM05D000536 ORTHO05D001213 2.4e-36 156.0 162 64.2
Sp6g24300 Schrenkiella parvula HOM05D000536 ORTHO05D001213 9.2e-36 154.1 143 69.2
BcaB01g04803 Brassica carinata HOM05D000536 ORTHO05D001213 1.3e-34 150.2 163 62.0
BcaC03g13731 Brassica carinata HOM05D003058 ORTHO05D003464 1.3e-34 150.2 162 63.6
BNapus_Darmor_BZH_scaffold_38p01800 Brassica napus HOM05D000536 ORTHO05D001213 1.3e-34 150.2 161 64.0
BolC3t13615H Brassica oleracea HOM05D000536 ORTHO05D001213 1.3e-34 150.2 163 62.0
BraA02t05555Z Brassica rapa HOM05D000536 ORTHO05D001213 1.3e-34 150.2 161 64.0
BolC2t07014H Brassica oleracea HOM05D000536 ORTHO05D001213 1.5e-33 146.7 158 63.9
THA.LOC104815103 Tarenaya hassleriana HOM05D000536 ORTHO05D001213 6.0e-19 98.2 166 45.8
RcHm_v2.0_Chr2g0089081 Rosa chinensis HOM05D000536 ORTHO05D001213 6.2e-16 88.2 156 42.3
A02p06040 Brassica napus HOM05D000536 ORTHO05D001213 3.1e-15 85.9 44 95.5
Thecc.09G123600 Theobroma cacao HOM05D000536 ORTHO05D001213 1.2e-14 84.0 66 63.6
TAR625G1232 Trochodendron aralioides HOM05D000536 ORTHO05D001213 1.2e-14 84.0 77 58.4
Eucgr.C04183 Eucalyptus grandis HOM05D000536 ORTHO05D001213 1.5e-14 83.6 66 65.2
Hma1.2p1_0018F.1_g012620 Hydrangea macrophylla HOM05D000536 ORTHO05D001213 2.0e-14 83.2 64 67.2
Prupe.7G240100 Prunus persica HOM05D000536 ORTHO05D001213 2.0e-14 83.2 83 55.4
TAR383G0639 Trochodendron aralioides HOM05D000536 ORTHO05D001213 2.0e-14 83.2 85 57.6
Ciclev10009401m.g Citrus clementina HOM05D000536 ORTHO05D001213 3.4e-14 82.4 170 38.8
Gorai.009G018800 Gossypium raimondii HOM05D000536 ORTHO05D001213 3.4e-14 82.4 154 38.3
Nn2g11972 Nelumbo nucifera HOM05D000536 ORTHO05D001213 3.4e-14 82.4 78 59.0
Aqoxy7G02114 Aquilegia oxysepala HOM05D000536 ORTHO05D001213 4.4e-14 82.0 66 63.6
GSVIVG01015506001 Vitis vinifera HOM05D000536 ORTHO05D001213 4.4e-14 82.0 74 60.8
Gohir.A05G017500 Gossypium hirsutum HOM05D000536 ORTHO05D001213 7.5e-14 81.3 154 37.7
Gohir.D05G018400 Gossypium hirsutum HOM05D000536 ORTHO05D001213 7.5e-14 81.3 154 37.7
Hma1.2p1_0665F.1_g199100 Hydrangea macrophylla HOM05D000536 ORTHO05D001213 7.5e-14 81.3 64 65.6
Rhsim01G0076200 Rhododendron simsii HOM05D000536 ORTHO05D001213 1.7e-13 80.1 65 63.1
Rhsim01G0076300 Rhododendron simsii HOM05D000536 ORTHO05D001213 1.7e-13 80.1 65 63.1
COL.COLO4_05775 Corchorus olitorius HOM05D000536 ORTHO05D001213 2.2e-13 79.7 67 58.2
vmacro20599 Vaccinium macrocarpon HOM05D000536 ORTHO05D001213 2.2e-13 79.7 76 59.2
Atru.chr7.1210 Acer truncatum HOM05D000536 ORTHO05D001213 2.9e-13 79.3 75 58.7
CANSAT11G2354 Cannabis sativa HOM05D000536 ORTHO05D001213 2.9e-13 79.3 70 58.6
CAN.G377.8 Capsicum annuum HOM05D000536 ORTHO05D001213 2.9e-13 79.3 99 47.5
Cfa003351 Carpinus fangiana HOM05D000536 ORTHO05D001213 2.9e-13 79.3 148 38.5
PGR102G3259 Punica granatum HOM05D000536 ORTHO05D001213 3.7e-13 79.0 99 48.5
Cpa.g.sc75.54 Carica papaya HOM05D000536 ORTHO05D001213 4.9e-13 78.6 148 41.2
Peaxi162Scf00984g00117 Petunia axillaris HOM05D000536 ORTHO05D001213 6.4e-13 78.2 64 62.5
SalBow1G6056 Salvia bowleyana HOM05D000536 ORTHO05D001213 8.3e-13 77.8 64 62.5
CSS0008171 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 1.1e-12 77.4 73 58.9
CiPaw.03G242400 Carya illinoinensis HOM05D000536 ORTHO05D001213 1.1e-12 77.4 71 56.3
PGSC0003DMG400020679 Solanum tuberosum HOM05D000536 ORTHO05D001213 1.1e-12 77.4 91 50.5
FAN28G0052 Fragaria x ananassa HOM05D000536 ORTHO05D001213 1.4e-12 77.0 159 40.3
FAN26G0898 Fragaria x ananassa HOM05D000536 ORTHO05D001213 1.9e-12 76.6 159 40.3
Lj7A631G23 Lonicera japonica HOM05D000536 ORTHO05D001213 1.9e-12 76.6 98 48.0
QL02p087871 Quercus lobata HOM05D000536 ORTHO05D001213 1.9e-12 76.6 152 40.8
Duzib150G1540 Durio zibethinus HOM05D000536 ORTHO05D001213 2.4e-12 76.3 118 41.5
FvH4_1g03560 Fragaria vesca HOM05D000536 ORTHO05D001213 2.4e-12 76.3 159 40.3
Nitab4.5_0007260g0010 Nicotiana tabacum HOM05D000536 ORTHO05D001213 2.4e-12 76.3 50 70.0
Solyc12g006630.2 Solanum lycopersicum HOM05D000536 ORTHO05D001213 2.4e-12 76.3 86 52.3
Sopen12g002580 Solanum pennellii HOM05D000536 ORTHO05D001213 2.4e-12 76.3 86 52.3
TWI34G0627 Tripterygium wilfordii HOM05D000536 ORTHO05D001213 2.4e-12 76.3 152 40.8
TAR626G0923 Trochodendron aralioides HOM05D000536 ORTHO05D001213 2.4e-12 76.3 75 56.0
FAN23G0966 Fragaria x ananassa HOM05D000536 ORTHO05D001213 3.2e-12 75.9 159 39.6
Hund26491 Selenicereus undatus HOM05D000536 ORTHO05D001213 3.2e-12 75.9 99 46.5
FAN19G2088 Fragaria x ananassa HOM05D000536 ORTHO05D001213 4.1e-12 75.5 159 39.6
Migut.K00474 Erythranthe guttata HOM05D000536 ORTHO05D001213 5.4e-12 75.1 69 58.0
Cc06_g08740 Coffea canephora HOM05D000536 ORTHO05D001213 7.1e-12 74.7 160 37.5
Nitab4.5_0003558g0010 Nicotiana tabacum HOM05D000536 ORTHO05D001213 7.1e-12 74.7 67 59.7
Sed0016505 Sechium edule HOM05D000536 ORTHO05D001213 7.1e-12 74.7 82 52.4
Sed0020428 Sechium edule HOM05D000536 ORTHO05D001213 7.1e-12 74.7 78 52.6
TPR.G10718 Trifolium pratense HOM05D000536 ORTHO05D001213 7.1e-12 74.7 89 47.2
Duzib168G1357 Durio zibethinus HOM05D000536 ORTHO05D001213 9.2e-12 74.3 151 40.4
MD02G1034900 Malus domestica HOM05D000536 ORTHO05D001213 1.2e-11 73.9 173 36.4
EL10Ac8g18621 Beta vulgaris HOM05D000536 ORTHO05D001213 1.6e-11 73.6 122 43.4
Lalb_Chr07g0178841 Lupinus albus HOM05D000536 ORTHO05D001213 1.6e-11 73.6 86 44.2
ATR1156G077 Amborella trichopoda HOM05D000536 ORTHO05D001213 2.1e-11 73.2 106 41.5
Nn8g39397 Nelumbo nucifera HOM05D000536 ORTHO05D001213 2.1e-11 73.2 100 45.0
MD00G1106900 Malus domestica HOM05D000536 ORTHO05D001213 2.7e-11 72.8 168 37.5
ECA240G2050 Erigeron canadensis HOM05D000536 ORTHO05D001213 4.6e-11 72.0 84 47.6
Manes.14G130800 Manihot esculenta HOM05D000536 ORTHO05D001213 4.6e-11 72.0 147 38.1
MBI04_g07633_MAGBIO Magnolia biondii HOM05D000536 ORTHO05D001213 6.0e-11 71.6 144 39.6
Glyma.13G168300 Glycine max HOM05D000536 ORTHO05D001213 7.8e-11 71.2 85 47.1
BcaB01g04806 Brassica carinata HOM05D000536 ORTHO05D001213 1.0e-10 70.9 34 97.1
MELO3C004518.2 Cucumis melo HOM05D000536 ORTHO05D001213 1.0e-10 70.9 75 54.7
CsaV3_2G002750 Cucumis sativus L. HOM05D000536 ORTHO05D001213 1.0e-10 70.9 75 54.7
ClCG11G002920 Citrullus lanatus HOM05D000536 ORTHO05D001213 1.3e-10 70.5 75 54.7
HanXRQChr06g0180261 Helianthus annuus HOM05D000536 ORTHO05D001213 1.3e-10 70.5 107 43.0
CSS0018342 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 2.3e-10 69.7 123 40.7
CSS0043910 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 2.3e-10 69.7 123 40.7
Dinv36543 Davidia involucrata HOM05D000536 ORTHO05D001213 2.3e-10 69.7 153 32.7
AUR62033482 Chenopodium quinoa HOM05D000536 ORTHO05D001213 3.0e-10 69.3 85 49.4
Glyma.17G116000 Glycine max HOM05D000536 ORTHO05D001213 5.1e-10 68.6 85 47.1
Medtr4g114060 Medicago truncatula HOM05D000536 ORTHO05D001213 6.6e-10 68.2 50 62.0
PSO170G1145 Papaver somniferum HOM05D000536 ORTHO05D001213 6.6e-10 68.2 46 63.0
PSO455G0146 Papaver somniferum HOM05D000536 ORTHO05D001213 6.6e-10 68.2 46 63.0
HanXRQChr03g0062531 Helianthus annuus HOM05D000536 ORTHO05D001213 8.6e-10 67.8 66 56.1
Psat4g040840 Pisum sativum HOM05D000536 ORTHO05D001213 1.1e-09 67.4 184 33.2
Sc18g0000670 Simmondsia chinensis HOM05D000536 ORTHO05D001213 1.5e-09 67.0 106 40.6
arahy.Tifrunner.gnm1.ann1.62CDNH Arachis hypogaea HOM05D000536 ORTHO05D001213 1.9e-09 66.6 89 44.9
Lsat_1_v5_gn_7_45721 Lactuca sativa HOM05D000536 ORTHO05D001213 2.5e-09 66.2 65 50.8
Lj4g0020082 Lotus japonicus HOM05D000536 ORTHO05D001213 3.3e-09 65.9 49 63.3
CDE04G2147 Ceratophyllum demersum HOM05D001564 ORTHO05D001439 5.6e-09 65.1 65 52.3
AUR62011093 Chenopodium quinoa HOM05D000536 ORTHO05D001213 5.6e-09 65.1 50 62.0
Lalb_Chr12g0197831 Lupinus albus HOM05D000536 ORTHO05D001213 9.5e-09 64.3 118 42.4
arahy.Tifrunner.gnm1.ann1.VNPM5I Arachis hypogaea HOM05D000536 ORTHO05D001213 1.2e-08 63.9 153 35.3
Oeu034111.1 Olea europaea HOM05D000536 ORTHO05D001213 4.7e-08 62.0 96 39.6
HanXRQChr09g0242341 Helianthus annuus HOM05D000536 ORTHO05D001213 8.1e-08 61.2 71 47.9
Lsat_1_v5_gn_8_58960 Lactuca sativa HOM05D000536 ORTHO05D001213 1.1e-07 60.8 154 32.5
Zm00001eb342300 Zea mays HOM05D000536 ORTHO05D001213 6.8e-07 58.2 65 47.7
DCAR_017824 Daucus carota HOM05D000536 ORTHO05D001213 8.9e-07 57.8 53 52.8
DCAR_017825 Daucus carota HOM05D000536 ORTHO05D001213 8.9e-07 57.8 53 52.8
MD06G1184500 Malus domestica HOM05D000536 ORTHO05D001213 2.0e-06 56.6 41 68.3
SEGI_36394 Sequoiadendron giganteum HOM05D000536 ORTHO05D001213 2.0e-06 56.6 58 56.9
arahy.Tifrunner.gnm1.ann1.MWX564 Arachis hypogaea HOM05D000536 ORTHO05D001213 2.6e-06 56.2 41 63.4
arahy.Tifrunner.gnm1.ann1.YF22WB Arachis hypogaea HOM05D000536 ORTHO05D001213 2.6e-06 56.2 41 63.4
Os01g0555600 Oryza sativa ssp. japonica HOM05D000536 ORTHO05D001213 3.4e-06 55.8 44 56.8
CSS0038761 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 4.4e-06 55.5 41 63.4
Haze_25610 Corylus avellana HOM05D000536 ORTHO05D001213 4.4e-06 55.5 141 34.0
Migut.I00101 Erythranthe guttata HOM05D000536 ORTHO05D001213 4.4e-06 55.5 41 65.9
Cc04_g16020 Coffea canephora HOM05D000536 ORTHO05D001213 7.6e-06 54.7 41 63.4
Peaxi162Scf00689g00547 Petunia axillaris HOM05D000536 ORTHO05D001213 7.6e-06 54.7 41 63.4
Sc12g0005930 Simmondsia chinensis HOM05D000536 ORTHO05D001213 9.9e-06 54.3 42 59.5


User provided reference genes

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