Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 9.7e-192 673.3 342 100.0
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 2.1e-146 522.7 340 77.6
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 1.3e-143 513.5 341 76.8
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 3.7e-143 511.9 338 76.6
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 1.1e-142 510.4 339 76.7
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 1.9e-142 509.6 344 76.2
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 1.2e-141 506.9 344 75.6
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 6.6e-132 474.6 347 68.9
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 1.8e-129 466.5 348 68.7
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 4.0e-129 465.3 348 68.4
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 3.4e-128 462.2 350 67.1
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 4.4e-128 461.8 338 70.1
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 9.9e-128 460.7 350 67.4
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 1.9e-126 456.4 339 70.5
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 9.3e-126 454.1 338 69.5
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 9.3e-126 454.1 339 70.2
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 4.8e-122 441.8 339 67.6
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 7.9e-109 397.9 344 57.8
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 1.6e-98 363.6 349 57.0
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 2.2e-98 363.2 343 54.2
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 9.0e-97 357.8 343 53.1
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 2.6e-96 356.3 339 55.2
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 2.2e-95 353.2 293 59.7
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 8.5e-95 351.3 342 52.9
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 1.4e-94 350.5 343 51.9
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 1.6e-93 347.1 340 52.6
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.7e-93 346.3 340 52.6
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 1.8e-92 343.6 335 50.7
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 3.0e-92 342.8 344 50.6
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 3.9e-92 342.4 340 52.4
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 5.1e-92 342.0 338 51.8
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 6.7e-92 341.7 342 52.0
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 6.7e-92 341.7 340 49.4
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 8.8e-92 341.3 341 52.8
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 1.1e-91 340.9 344 51.7
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 1.9e-91 340.1 339 52.8
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 2.5e-91 339.7 344 50.3
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 5.7e-91 338.6 285 57.2
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 2.2e-90 336.7 345 49.6
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 3.7e-90 335.9 346 49.7
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 3.7e-90 335.9 347 51.6
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 8.2e-90 334.7 334 52.7
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.1e-89 334.3 339 50.7
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 1.4e-89 334.0 313 54.3
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 1.8e-89 333.6 341 49.3
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 1.8e-89 333.6 342 49.1
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 2.4e-89 333.2 335 50.1
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 2.4e-89 333.2 342 49.1
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 5.3e-89 332.0 337 50.7
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 2.0e-88 330.1 337 49.6
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 2.6e-88 329.7 336 48.8
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 2.6e-88 329.7 342 48.2
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 3.4e-88 329.3 348 48.9
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 1.0e-87 327.8 341 48.7
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 1.7e-87 327.0 344 48.3
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 3.8e-87 325.9 342 50.3
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 1.1e-86 324.3 302 52.3
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 1.1e-86 324.3 338 51.5
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 1.2e-85 320.9 340 51.5
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 6.1e-85 318.5 294 52.0
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 7.9e-85 318.2 286 52.8
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 1.0e-84 317.8 342 47.1
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 2.3e-84 316.6 339 48.1
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 5.1e-84 315.5 333 48.0
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 8.8e-84 314.7 346 48.8
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 2.0e-83 313.5 346 49.4
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 5.7e-83 312.0 333 47.4
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 7.4e-83 311.6 291 54.3
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 2.2e-82 310.1 289 51.9
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 2.8e-82 309.7 389 43.4
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 8.2e-82 308.1 346 49.1
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 3.1e-81 306.2 343 48.1
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 9.1e-81 304.7 310 51.3
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 1.3e-79 300.8 349 46.1
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 3.8e-79 299.3 347 47.0
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 3.8e-79 299.3 334 48.5
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 3.8e-79 299.3 244 59.4
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 5.0e-79 298.9 311 49.5
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 5.0e-79 298.9 359 45.4
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 1.9e-78 297.0 347 46.4
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 1.9e-78 297.0 307 50.2
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 2.5e-78 296.6 346 46.0
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 4.2e-78 295.8 304 51.0
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 5.2e-76 288.9 332 46.4
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 6.7e-76 288.5 344 45.3
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 8.8e-76 288.1 347 45.0
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 8.8e-76 288.1 298 47.3
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 1.7e-74 283.9 351 45.0
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 4.8e-74 282.3 191 73.3
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 1.1e-73 281.2 285 51.6
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 1.4e-73 280.8 291 46.0
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 1.4e-73 280.8 357 44.3
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 5.3e-73 278.9 343 44.3
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 2.9e-71 273.1 328 44.2
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 3.6e-69 266.2 320 45.6
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 5.2e-68 262.3 349 41.8
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 7.5e-67 258.5 355 43.4
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 5.9e-64 248.8 389 38.3
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 1.3e-63 247.7 368 42.4
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 1.7e-63 247.3 359 41.5
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 6.5e-63 245.4 374 41.7
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 5.0e-55 219.2 228 46.9
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 3.8e-47 193.0 160 56.9
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 2.6e-43 180.3 247 37.2
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 7.5e-43 178.7 300 38.0
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 6.0e-40 169.1 239 42.7
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 2.3e-39 167.2 205 41.0
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 2.3e-39 167.2 300 36.7
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 3.3e-38 163.3 363 32.2
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 2.1e-37 160.6 207 41.5
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 5.2e-36 156.0 359 33.1
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.6e-35 153.7 201 40.8
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.4e-35 153.3 201 40.8
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.8e-35 152.5 205 38.0
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 2.4e-33 147.1 227 36.1
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.2e-33 146.7 205 37.1
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.7e-32 143.7 208 38.5
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.6e-31 139.0 193 37.3
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.3e-30 135.6 209 38.3
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.5e-27 125.6 404 29.0
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 8.6e-23 112.1 175 36.0
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 2.4e-20 104.0 102 47.1
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 3.0e-15 87.0 102 44.1
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 1.5e-14 84.7 123 38.2
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 2.5e-14 84.0 112 42.0
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.6e-13 81.3 65 50.8


User provided reference genes

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