Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 5.3e-23 110.2 55 100.0
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 7.6e-14 79.7 45 88.9
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.9e-13 77.8 45 88.9
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 3.2e-12 74.3 45 84.4
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 4.2e-12 73.9 45 86.7
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 7.1e-12 73.2 45 82.2
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 9.3e-12 72.8 45 82.2
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 1.2e-11 72.4 44 81.8
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 1.6e-11 72.0 45 80.0
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 2.1e-11 71.6 45 80.0
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 2.7e-11 71.2 42 83.3
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 2.7e-11 71.2 42 85.7
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 7.9e-11 69.7 46 80.4
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 1.3e-10 68.9 45 77.8
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 1.3e-10 68.9 45 77.8
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 2.3e-10 68.2 42 81.0
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 3.9e-10 67.4 38 84.2
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 3.9e-10 67.4 45 73.3
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.9e-10 67.4 45 75.6
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 3.9e-10 67.4 41 78.0
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 5.1e-10 67.0 45 73.3
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 5.1e-10 67.0 45 73.3
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 5.1e-10 67.0 50 72.0
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 6.7e-10 66.6 45 75.6
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 6.7e-10 66.6 43 79.1
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 8.7e-10 66.2 41 75.6
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.1e-09 65.9 42 78.6
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 1.1e-09 65.9 45 68.9
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 1.5e-09 65.5 45 71.1
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 1.5e-09 65.5 50 66.0
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 1.9e-09 65.1 45 71.1
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 1.9e-09 65.1 45 68.9
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.9e-09 65.1 38 81.6
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.9e-09 65.1 45 71.1
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 2.5e-09 64.7 45 71.1
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 2.5e-09 64.7 40 75.0
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 3.3e-09 64.3 45 71.1
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 3.3e-09 64.3 45 68.9
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 4.3e-09 63.9 40 77.5
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 4.3e-09 63.9 38 81.6
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 4.3e-09 63.9 38 78.9
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 4.3e-09 63.9 40 77.5
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 4.3e-09 63.9 43 76.7
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 5.7e-09 63.5 39 79.5
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 5.7e-09 63.5 39 79.5
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 5.7e-09 63.5 39 79.5
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 5.7e-09 63.5 39 79.5
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 5.7e-09 63.5 39 79.5
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 7.4e-09 63.2 45 68.9
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 9.7e-09 62.8 45 71.1
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 9.7e-09 62.8 43 76.7
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 9.7e-09 62.8 44 70.5
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.3e-08 62.4 38 78.9
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.3e-08 62.4 45 71.1
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.3e-08 62.4 45 71.1
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 1.6e-08 62.0 45 66.7
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 2.8e-08 61.2 45 64.4
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 3.7e-08 60.8 37 78.4
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 3.7e-08 60.8 37 78.4
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 3.7e-08 60.8 45 68.9
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 3.7e-08 60.8 40 75.0
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 4.8e-08 60.5 45 64.4
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 4.8e-08 60.5 40 70.0
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 6.3e-08 60.1 37 78.4
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 8.2e-08 59.7 45 66.7
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 1.1e-07 59.3 40 70.0
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.1e-07 59.3 44 68.2
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 1.1e-07 59.3 39 74.4
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 1.4e-07 58.9 38 71.1
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 1.4e-07 58.9 39 74.4
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.8e-07 58.5 45 66.7
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.8e-07 58.5 40 70.0
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 1.8e-07 58.5 55 60.0
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 1.8e-07 58.5 45 66.7
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.4e-07 58.2 45 64.4
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 2.4e-07 58.2 37 75.7
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 2.4e-07 58.2 39 71.8
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.4e-07 58.2 33 81.8
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 3.1e-07 57.8 45 64.4
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 3.1e-07 57.8 37 70.3
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 3.1e-07 57.8 45 66.7
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 4.1e-07 57.4 38 73.7
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 4.1e-07 57.4 36 75.0
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 4.1e-07 57.4 45 64.4
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 5.3e-07 57.0 37 70.3
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 5.3e-07 57.0 37 70.3
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 6.9e-07 56.6 45 62.2
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 9.0e-07 56.2 37 73.0
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 9.0e-07 56.2 37 73.0
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.2e-06 55.8 37 73.0
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.5e-06 55.5 40 65.0
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 2.0e-06 55.1 34 76.5
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 2.6e-06 54.7 38 68.4
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 4.5e-06 53.9 38 68.4
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 4.5e-06 53.9 28 89.3


User provided reference genes

Program Settings