Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc27G50 Aethionema arabicum HOM05D000013 ORTHO05D059057 1.4e-34 149.1 76 100.0
Aa31LG1G3370 Aethionema arabicum HOM05D000013 ORTHO05D000011 1.7e-08 62.4 79 48.1
Thhalv10006785m.g Eutrema salsugineum HOM05D000013 ORTHO05D000011 3.9e-08 61.2 43 67.4
BcaC05g24993 Brassica carinata HOM05D000013 ORTHO05D000011 5.1e-08 60.8 43 67.4
BcaC05g24996 Brassica carinata HOM05D000013 ORTHO05D000011 5.1e-08 60.8 43 67.4
A06p07950 Brassica napus HOM05D000013 ORTHO05D000011 5.1e-08 60.8 43 67.4
C05p09560 Brassica napus HOM05D000013 ORTHO05D000011 5.1e-08 60.8 43 67.4
BolC5t29698H Brassica oleracea HOM05D000013 ORTHO05D000011 5.1e-08 60.8 43 67.4
Aa31LG1G3350 Aethionema arabicum HOM05D000013 ORTHO05D000011 6.6e-08 60.5 46 67.4
CARHR011580 Cardamine hirsuta HOM05D000013 ORTHO05D000011 1.5e-07 59.3 43 65.1
BolC8t52362H Brassica oleracea HOM05D000013 ORTHO05D000011 1.9e-07 58.9 46 58.7
Sp1g09980 Schrenkiella parvula HOM05D000013 ORTHO05D000011 1.9e-07 58.9 43 62.8
BcaC07g41785 Brassica carinata HOM05D000013 ORTHO05D000011 2.5e-07 58.5 46 58.7
C08p48230 Brassica napus HOM05D000013 ORTHO05D000011 2.5e-07 58.5 46 58.7
AT1G11330 Arabidopsis thaliana HOM05D000013 ORTHO05D000011 3.3e-07 58.2 46 63.0
A09p64460 Brassica napus HOM05D000013 ORTHO05D000011 3.3e-07 58.2 46 58.7
AL1G22410 Arabidopsis lyrata HOM05D000013 ORTHO05D000011 4.3e-07 57.8 43 65.1
BcaB08g37392 Brassica carinata HOM05D000013 ORTHO05D000011 4.3e-07 57.8 46 58.7
A09p63300 Brassica napus HOM05D000041 ORTHO05D000061 5.6e-07 57.4 46 58.7
C08p48210 Brassica napus HOM05D000013 ORTHO05D000011 5.6e-07 57.4 46 58.7
BraA09t41681Z Brassica rapa HOM05D000041 ORTHO05D000061 5.6e-07 57.4 46 58.7
A09p64440 Brassica napus HOM05D000013 ORTHO05D000011 7.3e-07 57.0 43 60.5
Carub.0001s1095 Capsella rubella HOM05D000013 ORTHO05D000011 9.6e-07 56.6 43 62.8
A09p64430 Brassica napus HOM05D000013 ORTHO05D000011 1.2e-06 56.2 45 57.8
Thhalv10006795m.g Eutrema salsugineum HOM05D000013 ORTHO05D000011 1.2e-06 56.2 41 63.4
Thhalv10022559m.g Eutrema salsugineum HOM05D000013 ORTHO05D000011 1.2e-06 56.2 43 60.5
BcaC07g41784 Brassica carinata HOM05D000013 ORTHO05D000011 3.6e-06 54.7 43 62.8
BcaB08g37394 Brassica carinata HOM05D000013 ORTHO05D000011 4.7e-06 54.3 42 59.5
C08p48220 Brassica napus HOM05D000013 ORTHO05D000011 4.7e-06 54.3 40 62.5
BcaB08g37393 Brassica carinata HOM05D000013 ORTHO05D000011 8.1e-06 53.5 43 60.5
BolC8t52361H Brassica oleracea HOM05D000013 ORTHO05D000011 8.1e-06 53.5 43 60.5


User provided reference genes

Program Settings