Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc26G90 Aethionema arabicum HOM05D005863 ORTHO05D003355 2.2e-119 432.6 259 100.0
Aa31sc46G40 Aethionema arabicum HOM05D005863 ORTHO05D003355 1.9e-99 366.3 262 86.3
Lalb_Chr23g0277781 Lupinus albus HOM05D013281 ORTHO05D003355 2.8e-10 70.1 80 36.2
Duzib268G1590 Durio zibethinus HOM05D005863 ORTHO05D003355 4.9e-10 69.3 96 31.2
Dinv14763 Davidia involucrata HOM05D005863 ORTHO05D003355 8.3e-10 68.6 103 28.2
Duzib251G0242 Durio zibethinus HOM05D005863 ORTHO05D003355 8.3e-10 68.6 94 30.9
QL03p055923 Quercus lobata HOM05D005863 ORTHO05D003355 1.4e-09 67.8 105 31.4
TAR629G1344 Trochodendron aralioides HOM05D005863 ORTHO05D003355 1.4e-09 67.8 104 31.7
MELO3C010709.2 Cucumis melo HOM05D005863 ORTHO05D003355 3.2e-09 66.6 97 33.0
Thecc.02G268600 Theobroma cacao HOM05D005863 ORTHO05D003355 3.2e-09 66.6 107 29.0
Gorai.005G174200 Gossypium raimondii HOM05D005863 ORTHO05D003355 4.1e-09 66.2 94 30.9
Manes.12G018600 Manihot esculenta HOM05D005863 ORTHO05D003355 5.4e-09 65.9 91 29.7
HanXRQChr01g0023571 Helianthus annuus HOM05D005863 ORTHO05D003355 9.2e-09 65.1 87 33.3
Gohir.A03G131400 Gossypium hirsutum HOM05D005863 ORTHO05D003355 1.2e-08 64.7 94 29.8
Glyma.11G245500 Glycine max HOM05D013281 ORTHO05D003355 2.0e-08 63.9 91 33.0
COL.COLO4_23547 Corchorus olitorius HOM05D005863 ORTHO05D003355 3.5e-08 63.2 94 28.7
Manes.13G019100 Manihot esculenta HOM05D005863 ORTHO05D003355 3.5e-08 63.2 114 25.4
Sabra10G0018100 Salix brachista HOM05D005863 ORTHO05D003355 3.5e-08 63.2 90 32.2
TWI36G0003 Tripterygium wilfordii HOM05D005863 ORTHO05D003355 3.5e-08 63.2 94 31.9
CsaV3_2G025110 Cucumis sativus L. HOM05D005863 ORTHO05D003355 4.5e-08 62.8 97 32.0
Nn4g22491 Nelumbo nucifera HOM05D005863 ORTHO05D003355 5.9e-08 62.4 96 27.1
CiPaw.11G070600 Carya illinoinensis HOM05D005863 ORTHO05D003355 7.8e-08 62.0 99 31.3
Ciclev10030561m.g Citrus clementina HOM05D005863 ORTHO05D003355 7.8e-08 62.0 93 30.1
Lsat_1_v5_gn_8_150460 Lactuca sativa HOM05D005863 ORTHO05D003355 7.8e-08 62.0 102 30.4
Potri.010G052200 Populus trichocarpa HOM05D005863 ORTHO05D003355 7.8e-08 62.0 90 31.1
TPR.G14234 Trifolium pratense HOM05D013281 ORTHO05D003355 1.0e-07 61.6 86 33.7
Sc14g0008880 Simmondsia chinensis HOM05D005863 ORTHO05D003355 1.7e-07 60.8 89 30.3
Lalb_Chr11g0075601 Lupinus albus HOM05D005863 ORTHO05D003355 2.3e-07 60.5 80 31.2
Rhsim12G0037600 Rhododendron simsii HOM05D005863 ORTHO05D003355 2.9e-07 60.1 146 30.1
vmacro01106 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 2.9e-07 60.1 108 28.7
PGR102G1092 Punica granatum HOM05D005863 ORTHO05D003355 3.9e-07 59.7 92 30.4
THA.LOC104825539 Tarenaya hassleriana HOM05D005863 ORTHO05D003355 5.0e-07 59.3 106 27.4
Medtr3g086220 Medicago truncatula HOM05D013281 ORTHO05D003355 6.6e-07 58.9 110 28.2
Thhalv10023229m.g Eutrema salsugineum HOM05D008497 ORTHO05D003355 8.6e-07 58.5 198 29.8
Nitab4.5_0007393g0020 Nicotiana tabacum HOM05D012928 ORTHO05D003355 8.6e-07 58.5 81 33.3
HanXRQChr08g0208041 Helianthus annuus HOM05D005863 ORTHO05D003355 1.1e-06 58.2 105 26.7
AT4G00920 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 1.5e-06 57.8 166 31.9
MD16G1107000 Malus domestica HOM05D005863 ORTHO05D017031 1.5e-06 57.8 69 33.3
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 1.5e-06 57.8 81 32.1
Haze_12305 Corylus avellana HOM05D005863 ORTHO05D003355 1.9e-06 57.4 126 27.8
PGSC0003DMG400010741 Solanum tuberosum HOM05D012928 ORTHO05D003355 1.9e-06 57.4 82 28.0
Atru.chr11.2201 Acer truncatum HOM05D005863 ORTHO05D003355 2.5e-06 57.0 98 27.6
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 2.5e-06 57.0 80 31.2
Potri.007G102500 Populus trichocarpa HOM05D005863 ORTHO05D003355 4.3e-06 56.2 92 28.3
PGR031G1574 Punica granatum HOM05D005863 ORTHO05D003355 4.3e-06 56.2 82 30.5
SalBow2G2700 Salvia bowleyana HOM05D005863 ORTHO05D003355 4.3e-06 56.2 83 28.9
Sp7g05260 Schrenkiella parvula HOM05D008497 ORTHO05D003355 4.3e-06 56.2 143 28.0
AT4G00930 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 5.6e-06 55.8 144 28.5
MBI14_g22553_MAGBIO Magnolia biondii HOM05D005863 ORTHO05D003355 5.6e-06 55.8 102 28.4
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 5.6e-06 55.8 83 28.9
AL7G45710 Arabidopsis lyrata HOM05D008497 ORTHO05D003355 7.3e-06 55.5 150 30.0
Sed0020016 Sechium edule HOM05D005863 ORTHO05D003355 9.5e-06 55.1 109 29.4


User provided reference genes

Program Settings