Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc26G130 Aethionema arabicum HOM05D008497 ORTHO05D003355 2.8e-70 268.5 134 100.0
Aa31sc26G120 Aethionema arabicum HOM05D003496 ORTHO05D003909 8.6e-19 97.4 90 54.4
Sp7g05260 Schrenkiella parvula HOM05D008497 ORTHO05D003355 2.0e-15 86.3 134 40.3
AT4G00930 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 3.4e-15 85.5 122 41.8
Aa31LG7G9560 Aethionema arabicum HOM05D008497 ORTHO05D003355 5.8e-15 84.7 87 43.7
Carub.0007s3238 Capsella rubella HOM05D008497 ORTHO05D003355 1.7e-14 83.2 93 41.9
MSTRG.544 Avicennia marina HOM05D005863 ORTHO05D003355 2.2e-14 82.8 96 43.8
AT5G37190 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 2.9e-14 82.4 120 40.8
AL7G45710 Arabidopsis lyrata HOM05D008497 ORTHO05D003355 1.4e-13 80.1 90 43.3
HanXRQChr08g0208041 Helianthus annuus HOM05D005863 ORTHO05D003355 2.4e-13 79.3 102 41.2
vmacro01106 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 4.1e-13 78.6 103 38.8
CARHR215860 Cardamine hirsuta HOM05D008497 ORTHO05D003355 5.4e-13 78.2 98 42.9
Thhalv10023229m.g Eutrema salsugineum HOM05D008497 ORTHO05D003355 9.2e-13 77.4 106 37.7
PSO017G4976 Papaver somniferum HOM05D040514 ORTHO05D003355 9.2e-13 77.4 96 37.5
Atru.chr11.2201 Acer truncatum HOM05D005863 ORTHO05D003355 3.5e-12 75.5 99 41.4
SGA_v2.0_scaffold124G33641 Striga asiatica HOM05D005863 ORTHO05D003355 3.5e-12 75.5 98 38.8
Lalb_Chr11g0075601 Lupinus albus HOM05D005863 ORTHO05D003355 4.6e-12 75.1 105 39.0
Nitab4.5_0011762g0010 Nicotiana tabacum HOM05D012928 ORTHO05D003355 4.6e-12 75.1 111 39.6
HanXRQChr01g0023571 Helianthus annuus HOM05D005863 ORTHO05D003355 6.0e-12 74.7 120 36.7
Lsat_1_v5_gn_8_150460 Lactuca sativa HOM05D005863 ORTHO05D003355 1.0e-11 73.9 85 42.4
Sopen05g009140 Solanum pennellii HOM05D012928 ORTHO05D003355 1.3e-11 73.6 107 33.6
BcaB07g31396 Brassica carinata HOM05D008497 ORTHO05D003355 1.7e-11 73.2 115 36.5
Migut.K00651 Erythranthe guttata HOM05D005863 ORTHO05D003355 1.7e-11 73.2 90 41.1
THA.LOC104807749 Tarenaya hassleriana HOM05D008497 ORTHO05D003355 1.7e-11 73.2 91 42.9
MSTRG.7960 Avicennia marina HOM05D005863 ORTHO05D003355 2.3e-11 72.8 86 41.9
Lalb_Chr23g0277781 Lupinus albus HOM05D013281 ORTHO05D003355 2.3e-11 72.8 85 42.4
Solyc05g014130.3 Solanum lycopersicum HOM05D012928 ORTHO05D003355 2.3e-11 72.8 90 35.6
PGSC0003DMG400010741 Solanum tuberosum HOM05D012928 ORTHO05D003355 3.0e-11 72.4 92 35.9
Duzib251G0242 Durio zibethinus HOM05D005863 ORTHO05D003355 5.1e-11 71.6 96 41.7
Gorai.005G174200 Gossypium raimondii HOM05D005863 ORTHO05D003355 5.1e-11 71.6 102 38.2
SalBow2G2700 Salvia bowleyana HOM05D005863 ORTHO05D003355 5.1e-11 71.6 90 41.1
BcaC04g22481 Brassica carinata HOM05D008497 ORTHO05D003355 6.6e-11 71.2 105 39.0
Psat5g094240 Pisum sativum HOM05D013281 ORTHO05D003355 6.6e-11 71.2 95 41.1
PGR031G1574 Punica granatum HOM05D005863 ORTHO05D003355 6.6e-11 71.2 92 41.3
C09p18810 Brassica napus HOM05D008497 ORTHO05D003355 8.6e-11 70.9 106 38.7
BolC9t54783H Brassica oleracea HOM05D008497 ORTHO05D003355 8.6e-11 70.9 106 38.7
Haze_12305 Corylus avellana HOM05D005863 ORTHO05D003355 1.1e-10 70.5 87 40.2
Duzib268G1590 Durio zibethinus HOM05D005863 ORTHO05D003355 1.1e-10 70.5 111 36.9
Manes.13G019100 Manihot esculenta HOM05D005863 ORTHO05D003355 1.1e-10 70.5 105 39.0
Nitab4.5_0000041g0190 Nicotiana tabacum HOM05D012928 ORTHO05D003355 1.1e-10 70.5 94 40.4
PGR102G1092 Punica granatum HOM05D005863 ORTHO05D003355 1.1e-10 70.5 89 40.4
Ciclev10030561m.g Citrus clementina HOM05D005863 ORTHO05D003355 1.5e-10 70.1 81 44.4
Gohir.A03G131400 Gossypium hirsutum HOM05D005863 ORTHO05D003355 1.5e-10 70.1 102 37.3
PSO339G3984 Papaver somniferum HOM05D005863 ORTHO05D003355 1.5e-10 70.1 119 37.0
THA.LOC104825539 Tarenaya hassleriana HOM05D005863 ORTHO05D003355 1.5e-10 70.1 88 40.9
Sp7g04810 Schrenkiella parvula HOM05D008497 ORTHO05D003355 1.9e-10 69.7 87 39.1
Nitab4.5_0007393g0020 Nicotiana tabacum HOM05D012928 ORTHO05D003355 2.5e-10 69.3 94 40.4
Thecc.02G268600 Theobroma cacao HOM05D005863 ORTHO05D003355 2.5e-10 69.3 118 35.6
Lj6A818T39 Lonicera japonica HOM05D005863 ORTHO05D003355 3.3e-10 68.9 94 38.3
Medtr3g086220 Medicago truncatula HOM05D013281 ORTHO05D003355 3.3e-10 68.9 88 42.0
A09p15560 Brassica napus HOM05D008497 ORTHO05D003355 5.6e-10 68.2 106 36.8
BraA09t37196Z Brassica rapa HOM05D008497 ORTHO05D003355 5.6e-10 68.2 106 36.8
CsaV3_2G025110 Cucumis sativus L. HOM05D005863 ORTHO05D003355 5.6e-10 68.2 110 39.1
Rhsim12G0037600 Rhododendron simsii HOM05D005863 ORTHO05D003355 5.6e-10 68.2 109 35.8
TPR.G14234 Trifolium pratense HOM05D013281 ORTHO05D003355 5.6e-10 68.2 94 39.4
Cpa.g.sc369.6 Carica papaya HOM05D005863 ORTHO05D003355 7.3e-10 67.8 93 37.6
Dinv14763 Davidia involucrata HOM05D005863 ORTHO05D003355 7.3e-10 67.8 113 35.4
Glyma.18G011700 Glycine max HOM05D013281 ORTHO05D003355 7.3e-10 67.8 87 39.1
CiPaw.11G070600 Carya illinoinensis HOM05D005863 ORTHO05D003355 9.6e-10 67.4 81 42.0
Sabra10G0018100 Salix brachista HOM05D005863 ORTHO05D003355 9.6e-10 67.4 94 40.4
Aqoxy3G01339 Aquilegia oxysepala HOM05D005863 ORTHO05D003355 1.2e-09 67.0 101 38.6
COL.COLO4_23547 Corchorus olitorius HOM05D005863 ORTHO05D003355 1.2e-09 67.0 89 41.6
ATR0751G078 Amborella trichopoda HOM05D005863 ORTHO05D003355 1.6e-09 66.6 88 37.5
Peaxi162Scf00128g00645 Petunia axillaris HOM05D012928 ORTHO05D003355 1.6e-09 66.6 89 38.2
QL03p055923 Quercus lobata HOM05D005863 ORTHO05D003355 2.1e-09 66.2 133 33.8
Nn4g22491 Nelumbo nucifera HOM05D005863 ORTHO05D003355 4.7e-09 65.1 91 37.4
Sc14g0008880 Simmondsia chinensis HOM05D005863 ORTHO05D003355 4.7e-09 65.1 86 40.7
VMungo1383G2020 Vigna mungo HOM05D013281 ORTHO05D003355 4.7e-09 65.1 87 40.2
DCAR_024069 Daucus carota HOM05D005863 ORTHO05D003355 6.2e-09 64.7 83 38.6
Thhalv10027990m.g Eutrema salsugineum HOM05D008497 ORTHO05D003355 6.2e-09 64.7 96 32.3
Manes.12G018600 Manihot esculenta HOM05D005863 ORTHO05D003355 6.2e-09 64.7 96 37.5
Sp2g01280 Schrenkiella parvula HOM05D008497 ORTHO05D027096 8.1e-09 64.3 126 34.1
AT4G00920 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 1.1e-08 63.9 91 37.4
PSO384G2180 Papaver somniferum HOM05D005863 ORTHO05D003355 1.1e-08 63.9 101 36.6
BraA01t02635Z Brassica rapa HOM05D008497 ORTHO05D003355 1.4e-08 63.5 120 35.8
AT2G01800 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 2.4e-08 62.8 104 33.7
EL10As2g23204 Beta vulgaris HOM05D025851 ORTHO05D003355 2.4e-08 62.8 94 36.2
FvH4_1g28370 Fragaria vesca HOM05D014719 ORTHO05D003355 2.4e-08 62.8 104 38.5
Glyma.11G245500 Glycine max HOM05D013281 ORTHO05D003355 2.4e-08 62.8 92 34.8
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 2.4e-08 62.8 115 34.8
Thhalv10028182m.g Eutrema salsugineum HOM05D008497 ORTHO05D003355 3.1e-08 62.4 65 41.5
Lj4g0027725 Lotus japonicus HOM05D013281 ORTHO05D003355 3.1e-08 62.4 89 37.1
TAR629G1344 Trochodendron aralioides HOM05D005863 ORTHO05D003355 3.1e-08 62.4 105 34.3
Sed0020016 Sechium edule HOM05D005863 ORTHO05D003355 4.0e-08 62.0 104 36.5
BcaC06g36075 Brassica carinata HOM05D008497 ORTHO05D003355 5.2e-08 61.6 120 35.8
C07p08170 Brassica napus HOM05D008497 ORTHO05D003355 5.2e-08 61.6 120 35.8
BolC7t41233H Brassica oleracea HOM05D008497 ORTHO05D003355 5.2e-08 61.6 120 35.8
Phvul.001G257200 Phaseolus vulgaris HOM05D013281 ORTHO05D003355 5.2e-08 61.6 87 36.8
Sed0006554 Sechium edule HOM05D005863 ORTHO05D003355 5.2e-08 61.6 89 39.3
AT2G02770 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 1.2e-07 60.5 84 38.1
MD16G1107000 Malus domestica HOM05D005863 ORTHO05D017031 1.2e-07 60.5 81 42.0
GSVIVG01000596001 Vitis vinifera HOM05D005863 ORTHO05D003355 1.2e-07 60.5 92 37.0
EL10Ac4g07554 Beta vulgaris HOM05D038882 ORTHO05D003355 3.4e-07 58.9 81 35.8
Cpa.g.sc12.119 Carica papaya HOM05D005863 ORTHO05D003355 3.4e-07 58.9 108 33.3
Zm00001eb079300 Zea mays HOM05D028546 ORTHO05D030325 3.4e-07 58.9 88 38.6
Actinidia37152 Actinidia chinensis HOM05D005863 ORTHO05D003355 4.4e-07 58.5 99 35.4
Carub.0003s3440 Capsella rubella HOM05D008497 ORTHO05D003355 7.6e-07 57.8 89 36.0
Sp1g41465 Schrenkiella parvula HOM05D012516 ORTHO05D003355 7.6e-07 57.8 104 32.7
MD13G1106900 Malus domestica HOM05D005863 ORTHO05D017031 9.9e-07 57.4 81 43.2
AL1G63810 Arabidopsis lyrata HOM05D008497 ORTHO05D003355 1.3e-06 57.0 95 36.8
Peaxi162Scf01762g00013 Petunia axillaris HOM05D005863 ORTHO05D003355 1.7e-06 56.6 73 41.1
BcaC02g10405 Brassica carinata HOM05D008497 ORTHO05D003355 2.2e-06 56.2 81 37.0
C04p29310 Brassica napus HOM05D008497 ORTHO05D003355 2.2e-06 56.2 81 37.0
FAN23G2175 Fragaria x ananassa HOM05D014719 ORTHO05D003355 2.2e-06 56.2 120 35.8
HPP92_027528 Vanilla planifolia HOM05D005863 ORTHO05D003355 2.9e-06 55.8 87 36.8
BolC4t24461H Brassica oleracea HOM05D008497 ORTHO05D003355 3.8e-06 55.5 112 30.4
Cc05_g15010 Coffea canephora HOM05D005863 ORTHO05D003355 3.8e-06 55.5 79 36.7
CAN.G650.29 Capsicum annuum HOM05D012928 ORTHO05D003355 6.4e-06 54.7 152 26.3
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 6.4e-06 54.7 91 35.2
Nitab4.5_0001159g0240 Nicotiana tabacum HOM05D005863 ORTHO05D003355 6.4e-06 54.7 73 39.7
CARHR045560 Cardamine hirsuta HOM05D000747 ORTHO05D001683 8.4e-06 54.3 109 34.9
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 8.4e-06 54.3 81 38.3


User provided reference genes

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