Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 3.7e-78 295.0 174 100.0
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.1e-55 220.3 135 82.2
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 1.1e-55 220.3 135 81.5
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 2.0e-55 219.5 136 83.1
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 3.3e-55 218.8 135 81.5
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 3.3e-55 218.8 135 81.5
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 3.3e-55 218.8 135 81.5
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 3.3e-55 218.8 135 81.5
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 3.3e-55 218.8 136 83.1
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 7.4e-55 217.6 135 80.7
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 7.4e-55 217.6 135 80.7
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 7.4e-55 217.6 135 80.7
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 7.4e-55 217.6 135 80.7
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 7.4e-55 217.6 135 80.7
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 1.7e-54 216.5 136 81.6
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 1.7e-54 216.5 136 81.6
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 2.8e-54 215.7 136 81.6
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 2.8e-54 215.7 132 83.3
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 8.2e-54 214.2 134 79.9
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 6.9e-53 211.1 134 79.1
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 2.0e-52 209.5 138 76.8
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 1.0e-51 207.2 137 75.9
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 2.2e-51 206.1 130 79.2
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 5.0e-51 204.9 131 80.2
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 5.0e-51 204.9 139 74.1
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 6.5e-51 204.5 136 75.7
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 8.5e-51 204.1 130 79.2
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 1.4e-50 203.4 134 76.1
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 1.9e-50 203.0 129 77.5
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 3.2e-50 202.2 131 77.9
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 3.2e-50 202.2 130 75.4
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 4.2e-50 201.8 138 71.0
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 4.2e-50 201.8 138 71.0
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 4.2e-50 201.8 130 77.7
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 4.2e-50 201.8 132 75.8
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 4.2e-50 201.8 129 77.5
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 5.5e-50 201.4 129 76.7
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 5.5e-50 201.4 135 74.8
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 7.2e-50 201.1 127 79.5
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 9.4e-50 200.7 132 75.0
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 9.4e-50 200.7 126 77.8
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 9.4e-50 200.7 126 77.8
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 2.1e-49 199.5 130 80.8
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 2.1e-49 199.5 133 76.7
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 2.1e-49 199.5 139 72.7
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.7e-49 199.1 138 69.6
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 3.6e-49 198.7 138 73.2
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 4.7e-49 198.4 129 74.4
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 6.1e-49 198.0 138 73.2
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 6.1e-49 198.0 129 77.5
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 8.0e-49 197.6 145 71.0
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 8.0e-49 197.6 129 73.6
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 1.0e-48 197.2 137 70.8
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.0e-48 197.2 130 76.2
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 1.4e-48 196.8 131 75.6
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 1.4e-48 196.8 131 74.8
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 1.4e-48 196.8 139 72.7
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 1.8e-48 196.4 129 75.2
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 1.8e-48 196.4 129 73.6
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 1.8e-48 196.4 132 72.7
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 1.8e-48 196.4 143 69.9
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 1.8e-48 196.4 139 71.9
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 3.0e-48 195.7 140 69.3
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 3.9e-48 195.3 125 76.0
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 5.2e-48 194.9 127 77.2
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 5.2e-48 194.9 132 74.2
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 5.2e-48 194.9 137 69.3
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 6.7e-48 194.5 137 70.1
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 6.7e-48 194.5 125 77.6
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 1.1e-47 193.7 135 70.4
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.1e-47 193.7 130 73.8
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 1.1e-47 193.7 127 76.4
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.1e-47 193.7 132 73.5
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 1.5e-47 193.4 134 70.9
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 2.0e-47 193.0 135 71.9
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.3e-47 192.2 130 73.1
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 4.4e-47 191.8 141 70.9
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 5.7e-47 191.4 128 75.8
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 5.7e-47 191.4 128 75.0
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 7.4e-47 191.0 138 71.0
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 7.4e-47 191.0 131 72.5
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 9.7e-47 190.7 132 72.7
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 1.3e-46 190.3 125 73.6
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 1.3e-46 190.3 125 75.2
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 1.3e-46 190.3 125 78.4
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 8.2e-46 187.6 132 72.7
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 8.2e-46 187.6 129 74.4
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 1.8e-45 186.4 117 80.3
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 1.8e-45 186.4 129 71.3
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 3.1e-45 185.7 147 66.0
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 4.1e-45 185.3 145 66.2
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 5.3e-45 184.9 137 67.2
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 9.1e-45 184.1 135 71.1
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 9.1e-45 184.1 131 71.0
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 2.0e-44 183.0 124 73.4
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 3.5e-44 182.2 129 70.5
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 1.7e-43 179.9 132 74.2
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 3.8e-43 178.7 119 73.9
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 3.8e-43 178.7 130 67.7
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 4.2e-42 175.3 129 69.8
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 4.2e-42 175.3 122 71.3
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 5.5e-42 174.9 129 67.4
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 1.2e-41 173.7 150 60.7
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 1.6e-41 173.3 130 66.2
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 2.3e-40 169.5 137 65.0
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 2.3e-40 169.5 164 59.1
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 1.2e-39 167.2 121 65.3
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 4.8e-38 161.8 130 63.8
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 6.3e-38 161.4 130 63.1
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 4.1e-37 158.7 110 69.1
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 7.0e-37 157.9 108 70.4
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 4.5e-36 155.2 138 55.8
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 7.7e-36 154.5 138 56.5
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 1.5e-34 150.2 136 56.6
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 5.5e-34 148.3 109 75.2
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 3.6e-33 145.6 143 52.4
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 3.4e-31 139.0 136 54.4
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 4.4e-31 138.7 121 53.7
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 2.4e-29 132.9 141 51.8
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 2.9e-27 125.9 144 54.2
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.9e-26 123.2 167 44.3
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.3e-22 110.5 125 51.2
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 5.4e-21 105.1 101 62.4
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 1.2e-17 94.0 46 91.3
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 3.0e-16 89.4 105 51.4
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 1.2e-15 87.4 83 62.7
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 4.4e-15 85.5 46 76.1
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 4.6e-12 75.5 124 37.1
C07p55210 Brassica napus HOM05D005878 ORTHO05D033170 1.6e-09 67.0 56 73.2
BolC7t45992H Brassica oleracea HOM05D005878 ORTHO05D033170 6.2e-09 65.1 58 72.4
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 4.0e-08 62.4 54 55.6


User provided reference genes

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