Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc250G70 Aethionema arabicum HOM05D011315 ORTHO05D013409 2.0e-64 248.8 116 100.0
Aa31LG8G10210 Aethionema arabicum HOM05D011315 ORTHO05D013409 2.4e-25 119.0 116 52.6
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 2.5e-22 109.0 114 46.5
AT2G13295 Arabidopsis thaliana HOM05D011315 ORTHO05D013409 3.2e-22 108.6 118 45.8
A01p31390 Brassica napus HOM05D011315 ORTHO05D013409 1.2e-21 106.7 118 45.8
C01p39980 Brassica napus HOM05D011315 ORTHO05D013409 1.2e-21 106.7 121 45.5
BraA01t03264Z Brassica rapa HOM05D011315 ORTHO05D013409 4.0e-20 101.7 118 44.9
Thhalv10001126m.g Eutrema salsugineum HOM05D011315 ORTHO05D013409 2.6e-19 99.0 117 43.6
Carub.0003s2392 Capsella rubella HOM05D011315 ORTHO05D013409 9.7e-19 97.1 114 40.4
Carub.0003s2393 Capsella rubella HOM05D011315 ORTHO05D013409 1.3e-18 96.7 111 40.5
Thhalv10022046m.g Eutrema salsugineum HOM05D011315 ORTHO05D013409 3.1e-17 92.0 116 40.5
Thhalv10022111m.g Eutrema salsugineum HOM05D011315 ORTHO05D013409 4.1e-17 91.7 100 43.0
CARHR100000 Cardamine hirsuta HOM05D011315 ORTHO05D013409 5.0e-15 84.7 107 41.1
BolC1t03953H Brassica oleracea HOM05D011315 ORTHO05D013409 1.9e-14 82.8 82 45.1
Thhalv10022217m.g Eutrema salsugineum HOM05D011315 ORTHO05D013409 3.6e-13 78.6 65 46.2
AL3G38390 Arabidopsis lyrata HOM05D011315 ORTHO05D013409 3.0e-12 75.5 48 66.7
QL01p017875 Quercus lobata HOM05D002739 ORTHO05D002877 2.4e-09 65.9 112 28.6
AL8G32240 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 9.1e-09 63.9 85 35.3
AT5G56480 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 9.1e-09 63.9 109 32.1
AT1G32280 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 1.2e-08 63.5 58 43.1
Carub.0001s3061 Capsella rubella HOM05D002739 ORTHO05D002877 1.2e-08 63.5 58 44.8
AL1G46440 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 2.0e-08 62.8 108 31.5
QL04p013297 Quercus lobata HOM05D002739 ORTHO05D002877 7.7e-08 60.8 74 32.4
Duzib168G0958 Durio zibethinus HOM05D002739 ORTHO05D002877 1.3e-07 60.1 74 33.8
QL04p013280 Quercus lobata HOM05D002739 ORTHO05D002877 1.3e-07 60.1 59 42.4
AL3G45240 Arabidopsis lyrata HOM05D011315 ORTHO05D013409 2.3e-07 59.3 37 67.6
CSS0046368 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 2.9e-07 58.9 74 31.1
CSS0000269 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 8.6e-07 57.4 109 27.5
CSS0014844 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 8.6e-07 57.4 109 27.5
CSS0048223 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 8.6e-07 57.4 109 27.5
AUR62026812 Chenopodium quinoa HOM05D002739 ORTHO05D002877 8.6e-07 57.4 70 31.4
Prupe.4G257900 Prunus persica HOM05D002739 ORTHO05D002877 8.6e-07 57.4 54 38.9
Potri.001G023200 Populus trichocarpa HOM05D002739 ORTHO05D002877 1.1e-06 57.0 110 28.2
QL04p013260 Quercus lobata HOM05D002739 ORTHO05D002877 1.1e-06 57.0 59 37.3
THA.LOC104819118 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 1.1e-06 57.0 102 26.5
Manes.04G135500 Manihot esculenta HOM05D002739 ORTHO05D002877 1.5e-06 56.6 74 28.4
Sp7g28750 Schrenkiella parvula HOM05D002739 ORTHO05D002877 1.9e-06 56.2 74 29.7
AL7G21220 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 2.5e-06 55.8 74 28.4
arahy.Tifrunner.gnm1.ann1.ZFJ3WN Arachis hypogaea HOM05D002739 ORTHO05D002877 2.5e-06 55.8 74 31.1
BcaC09g51875 Brassica carinata HOM05D002739 ORTHO05D002877 2.5e-06 55.8 74 31.1
CARHR270130 Cardamine hirsuta HOM05D002739 ORTHO05D002877 2.5e-06 55.8 58 36.2
AUR62037241 Chenopodium quinoa HOM05D002739 ORTHO05D002877 2.5e-06 55.8 59 32.2
Sabra01G0017600 Salix brachista HOM05D002739 ORTHO05D002877 2.5e-06 55.8 106 26.4
Hund15707 Selenicereus undatus HOM05D002739 ORTHO05D002877 2.5e-06 55.8 74 29.7
AT4G30880 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 3.3e-06 55.5 74 28.4
Potri.001G023300 Populus trichocarpa HOM05D002739 ORTHO05D002877 3.3e-06 55.5 82 29.3
Sc10g0004220 Simmondsia chinensis HOM05D002739 ORTHO05D002877 3.3e-06 55.5 74 29.7
Dinv36202 Davidia involucrata HOM05D002739 ORTHO05D002877 4.2e-06 55.1 59 35.6
Thhalv10026851m.g Eutrema salsugineum HOM05D002739 ORTHO05D002877 4.2e-06 55.1 74 29.7
THA.LOC104826714 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 4.2e-06 55.1 74 29.7
BcaB03g12664 Brassica carinata HOM05D002739 ORTHO05D002877 5.5e-06 54.7 74 28.4
PGR031G3191 Punica granatum HOM05D002739 ORTHO05D002877 7.2e-06 54.3 74 31.1


User provided reference genes

Program Settings