Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 1.7e-160 569.3 289 100.0
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.1e-124 450.3 253 86.6
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 2.8e-123 445.7 261 83.5
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 3.6e-123 445.3 256 85.9
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 1.1e-122 443.7 261 83.1
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.2e-121 440.3 261 82.4
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 9.9e-121 437.2 261 82.0
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 6.4e-120 434.5 263 81.4
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 6.4e-120 434.5 263 81.4
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 8.4e-120 434.1 263 81.4
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 5.4e-119 431.4 263 81.0
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 3.9e-117 425.2 263 79.8
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 2.3e-109 399.4 253 79.1
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 1.8e-101 373.2 242 74.4
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 9.0e-98 360.9 233 76.8
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 4.5e-97 358.6 255 69.4
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 5.8e-97 358.2 244 70.5
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 2.9e-96 355.9 242 70.2
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 3.8e-96 355.5 241 71.8
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.4e-95 353.6 239 72.0
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 5.5e-95 351.7 254 66.5
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 1.6e-94 350.1 262 69.5
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 2.1e-94 349.7 252 68.3
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 3.5e-94 349.0 239 70.7
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.5e-94 349.0 250 71.2
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 3.5e-94 349.0 253 67.6
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 6.0e-94 348.2 259 68.7
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 6.0e-94 348.2 242 73.1
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.8e-93 346.7 262 68.7
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.3e-93 346.3 262 68.7
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 3.0e-93 345.9 262 68.7
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 5.1e-93 345.1 241 68.5
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 6.7e-93 344.7 245 68.6
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 1.9e-92 343.2 261 68.6
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 3.3e-92 342.4 241 68.9
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 3.3e-92 342.4 244 68.0
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 3.3e-92 342.4 262 69.1
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 9.7e-92 340.9 254 65.7
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 1.6e-91 340.1 255 65.9
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 2.2e-91 339.7 245 67.3
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 4.8e-91 338.6 242 66.1
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 6.3e-91 338.2 245 65.7
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 3.1e-90 335.9 238 66.0
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 4.1e-90 335.5 240 66.2
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 9.0e-90 334.3 239 67.8
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 9.0e-90 334.3 247 67.2
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 1.2e-89 334.0 249 65.5
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.2e-89 334.0 260 63.8
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 2.0e-89 333.2 249 65.5
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 3.4e-89 332.4 244 66.4
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 4.5e-89 332.0 239 67.4
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 7.7e-89 331.3 239 66.5
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 7.7e-89 331.3 284 59.9
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.0e-88 330.9 257 63.8
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.0e-88 330.9 257 63.8
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 1.3e-88 330.5 243 67.5
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.7e-88 330.1 247 67.6
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 5.0e-88 328.6 236 65.3
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 5.0e-88 328.6 230 68.7
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 6.5e-88 328.2 254 63.8
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.1e-87 327.4 245 66.1
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.9e-87 326.6 253 64.0
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 2.5e-87 326.2 236 66.1
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 2.5e-87 326.2 242 65.3
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 3.2e-87 325.9 244 65.6
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 4.2e-87 325.5 243 66.7
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 5.5e-87 325.1 244 63.5
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 1.2e-86 323.9 244 65.6
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 3.6e-86 322.4 243 65.0
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 6.1e-86 321.6 249 65.1
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 6.1e-86 321.6 269 60.2
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 6.1e-86 321.6 244 63.1
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 7.9e-86 321.2 241 66.0
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 7.9e-86 321.2 245 62.4
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 1.0e-85 320.9 241 66.0
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 1.0e-85 320.9 244 63.9
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 1.4e-85 320.5 239 64.0
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 8.8e-85 317.8 246 64.6
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 2.0e-84 316.6 257 61.9
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.7e-84 315.1 244 62.7
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 7.4e-84 314.7 238 63.0
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 2.8e-83 312.8 259 60.6
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.1e-82 310.8 262 59.9
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 3.1e-82 309.3 245 60.8
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 5.3e-82 308.5 240 66.7
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 5.3e-82 308.5 240 62.5
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 6.9e-82 308.1 245 62.9
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 2.6e-81 306.2 252 58.7
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 3.4e-81 305.8 242 62.0
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 4.5e-81 305.4 239 61.1
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 7.7e-81 304.7 255 61.6
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.3e-80 303.9 258 57.8
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 2.9e-80 302.8 245 60.8
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 8.5e-80 301.2 234 62.4
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 1.9e-79 300.1 238 60.5
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.2e-79 299.3 233 64.4
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 2.3e-77 293.1 245 61.2
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 3.0e-77 292.7 253 59.3
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.9e-73 278.5 214 63.6
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 1.7e-72 276.9 269 53.9
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 8.8e-69 264.6 270 50.4
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.8e-66 256.9 267 49.8
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 4.5e-65 252.3 236 56.4
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 1.7e-64 250.4 244 51.2
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 8.0e-62 241.5 167 71.3
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.4e-61 240.7 205 59.0
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 9.7e-60 234.6 164 68.9
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 5.3e-58 228.8 176 64.2
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 1.6e-57 227.3 226 50.0
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 7.2e-55 218.4 165 65.5
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 3.6e-54 216.1 165 64.8
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 1.0e-53 214.5 164 63.4
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.0e-53 213.0 144 70.1
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 5.9e-49 198.7 247 43.7
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 7.2e-47 191.8 135 71.1
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 9.8e-44 181.4 217 43.3
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 6.3e-43 178.7 185 51.9
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.6e-40 168.7 143 59.4
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 4.3e-39 166.0 112 66.1
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.6e-38 162.9 134 62.7
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 4.0e-37 159.5 152 56.6
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 7.5e-36 155.2 155 55.5
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 1.3e-32 144.4 100 66.0
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 2.3e-32 143.7 98 75.5
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 2.3e-32 143.7 98 75.5
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 5.8e-28 129.0 137 46.7
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.6e-25 120.9 95 57.9
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.1e-23 114.8 139 44.6
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 3.3e-23 113.2 91 65.9
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 1.2e-22 111.3 106 50.9
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.1e-22 110.5 90 55.6
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 3.6e-22 109.8 91 58.2
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 2.9e-19 100.1 90 51.1
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.7e-19 99.8 247 32.4
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 6.6e-16 89.0 240 30.0
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 2.7e-09 67.0 83 45.8
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.1e-08 62.8 83 43.4
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.1e-08 62.8 83 43.4


User provided reference genes

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